git://source.jalview.org / jabaws.git / blobdiff
? search:
summary | shortlog | log | commit | commitdiff | tree
raw | inline | side by side
JWS-112 Bumping version of T-Coffee to version 11.00.8cbe486.
[jabaws.git] / binaries / src / tcoffee / example / sproteases_large.code_name
diff --git a/binaries/src/tcoffee/example/sproteases_large.code_name b/binaries/src/tcoffee/example/sproteases_large.code_name
new file mode 100644 (file)
index 0000000..d57d6ec
--- /dev/null
+++ b/binaries/src/tcoffee/example/sproteases_large.code_name
@@ -0,0 +1,173 @@
+
+sp|P08311|CATG_HUMAN C1
+sp|P28293|CATG_MOUSE C2
+sp|P80931|MCT1A_SHEEP C3
+sp|O46683|MCPT3_SHEEP C4
+sp|P80219|DDN1_BOVIN C5
+sp|P20718|GRAH_HUMAN C6
+sp|P10144|GRAB_HUMAN C7
+sp|P04187|GRAB_MOUSE C8
+sp|P18291|NKP1_RAT C9
+sp|Q06605|GRZ1_RAT C10
+sp|P21812|MCPT4_MOUSE C11
+sp|P23946|MCPT1_HUMAN C12
+sp|P43430|MCPT8_MOUSE C13
+sp|P52195|MCPT1_PAPHA C14
+sp|P56435|MCPT1_MACFA C15
+sp|Q06606|GRZ2_RAT C16
+sp|P13366|GRAG_MOUSE C17
+sp|P79204|MCPT2_SHEEP C18
+sp|P11034|MCPT1_MOUSE C19
+sp|P21842|MCPT1_CANFA C20
+sp|P08882|GRAC_MOUSE C21
+sp|P97594|MCPT8_RAT C22
+sp|P09650|MCPT1_RAT C23
+sp|P50340|MCPT1_MERUN C24
+sp|P08883|GRAF_MOUSE C25
+sp|P08884|GRAE_MOUSE C26
+sp|P00770|MCPT2_RAT C27
+sp|P11033|GRAD_MOUSE C28
+sp|P97592|MCPT4_RAT C29
+sp|O35164|MCPT9_MOUSE C30
+sp|Q00356|MCPTX_MOUSE C31
+sp|P50339|MCPT3_RAT C32
+sp|P21844|MCPT5_MOUSE C33
+sp|P50341|MCPT2_MERUN C34
+sp|P15119|MCPT2_MOUSE C35
+sp|P35033|TRY3_SALSA C36
+sp|P70059|TRY2_XENLA C37
+sp|P35032|TRY2_SALSA C38
+sp|P00762|TRY1_RAT C39
+sp|P35031|TRY1_SALSA C40
+sp|P06872|TRY2_CANFA C41
+sp|P24158|PRTN3_HUMAN C42
+sp|P07477|TRY1_HUMAN C43
+sp|P16049|TRY1_GADMO C44
+sp|Q9UKR3|KLK13_HUMAN C45
+sp|Q91041|TRYX_GADMO C46
+sp|Q90627|TRY1_CHICK C47
+sp|P51779|CFAD_PIG C48
+sp|P00746|CFAD_HUMAN C49
+sp|Q9H2R5|KLK15_HUMAN C50
+sp|P00761|TRYP_PIG C51
+sp|P08426|TRY3_RAT C52
+sp|P12544|GRAA_HUMAN C53
+sp|Q90628|TRY2_CHICK C54
+sp|Q9P0G3|KLK14_HUMAN C55
+sp|P00763|TRY2_RAT C56
+sp|P07146|TRY2_MOUSE C57
+sp|P35030|TRY3_HUMAN C58
+sp|Q7JIG6|KLK15_SAGOE C59
+sp_vs|P35030-2|P35030 C60
+sp_vs|P35030-3|P35030 C61
+sp|P11032|GRAA_MOUSE C62
+sp_vs|P11032-2|P11032 C63
+sp|P06871|TRY1_CANFA C64
+sp|P07478|TRY2_HUMAN C65
+sp|P19799|TRY1_XENLA C66
+sp|P49864|GRAK_RAT C67
+sp|Q90629|TRY3_CHICK C68
+sp|P49863|GRAK_HUMAN C69
+sp|O35205|GRAK_MOUSE C70
+sp|P32822|TRYB_RAT C71
+sp|P00760|TRY1_BOVIN C72
+sp|Q92876|KLK6_HUMAN C73
+sp|Q9Y5K2|KLK4_HUMAN C74
+sp|P32821|TRYA_RAT C75
+sp|P12788|TRY4_RAT C76
+sp|Q61096|PRTN3_MOUSE C77
+sp|P00764|TRYP_SQUAC C78
+sp|P32038|CFAD_RAT C79
+sp|Q7YRZ7|GRAA_BOVIN C80
+sp|Q29463|TRY2_BOVIN C81
+sp|O60259|NRPN_HUMAN C82
+sp|Q3UP87|ELNE_MOUSE C83
+sp_vs|O60259-2|O60259 C84
+sp|P49862|KLK7_HUMAN C85
+sp|P09582|ESTA_CANFA C86
+sp|P36178|CTRB2_PENVA C87
+sp|Q00871|CTRB1_PENVA C88
+sp|P00756|KLK3_MOUSE C89
+sp|P08246|ELNE_HUMAN C90
+sp|P15946|KLKBB_MOUSE C91
+sp|P00771|COGS_UCAPU C92
+sp|P03953|CFAD_MOUSE C93
+sp_vs|P03953-2|P03953 C94
+sp|O88780|NRPN_RAT C95
+sp|P20151|KLK2_HUMAN C96
+sp|P51124|GRAM_HUMAN C97
+sp|Q91VE3|KLK7_MOUSE C98
+sp|Q9JM71|KLKBR_MOUSE C99
+sp|Q6H321|KLK2_HORSE C100
+sp|Q9UBX7|KLK11_HUMAN C101
+sp_vs|Q9UBX7-1|Q9UBX7 C102
+sp|Q61955|NRPN_MOUSE C103
+sp|Q9QYN3|KLK11_MOUSE C104
+sp_vs|Q9QYN3-2|Q9QYN3 C105
+sp|P35034|TRYP_PLEPL C106
+sp|P15947|KLK6_MOUSE C107
+sp|P15948|KLK22_MOUSE C108
+sp|P00758|KLK1_RAT C109
+sp|P15945|KLK5_MOUSE C110
+sp|P33619|KLK3_MACMU C111
+sp|P06870|KLK1_HUMAN C112
+sp|P06868|PLMN_BOVIN C113
+sp|Q61754|KLK24_MOUSE C114
+sp|Q28773|KLK1_PAPHA C115
+sp|P08419|ELA2A_PIG C116
+sp|P00767|CTRB_BOVIN C117
+sp|P47796|CTRA_GADMO C118
+sp|P81286|PLMN_SHEEP C119
+sp|P36374|KLK8_RAT C120
+sp|P12323|KLK2_CAVPO C121
+sp|Q03238|GRAM_RAT C122
+sp|P07288|KLK3_HUMAN C123
+sp|P40313|CTRL_HUMAN C124
+sp|Q6DT45|KLK3_MACFA C125
+sp|P20160|CAP7_HUMAN C126
+sp|P15949|KLKB9_MOUSE C127
+sp|P00755|KLK1_MOUSE C128
+sp|P36368|KLK13_MOUSE C129
+sp|P07338|CTRB1_RAT C130
+sp|P00757|KLKB4_MOUSE C131
+sp|P36369|KLK26_MOUSE C132
+sp|Q61759|KLKBL_MOUSE C133
+sp|Q07276|KLK1_MACFA C134
+sp|P00766|CTRA_BOVIN C135
+sp|Q28153|ELA1_BOVIN C136
+sp|P04813|CTR2_CANFA C137
+sp|P20918|PLMN_MOUSE C138
+sp|P00752|KLK_PIG C139
+sp|P05208|ELA2A_MOUSE C140
+sp|P07628|KLKB8_MOUSE C141
+sp|P80015|CAP7_PIG C142
+sp|P36375|KLK10_RAT C143
+sp|Q29461|ELA2A_BOVIN C144
+sp|P17538|CTRB1_HUMAN C145
+sp|P36373|KLK7_RAT C146
+sp|Q8BIK6|TMPS7_MOUSE C147
+sp|P07647|KLK9_RAT C148
+sp|P29786|TRY3_AEDAE C149
+sp|P35036|TRY2_ANOGA C150
+sp|Q8K0D2|HABP2_MOUSE C151
+sp_vs|Q8K0D2-2|Q8K0D2 C152
+sp|P35035|TRY1_ANOGA C153
+sp|P36376|KLK12_RAT C154
+sp|P00774|ELA2A_RAT C155
+sp|P08217|ELA2A_HUMAN C156
+sp|Q6L711|HABP2_RAT C157
+sp|P09093|ELA3A_HUMAN C158
+sp|P20231|TRYB2_HUMAN C159
+sp|Q15661|TRYB1_HUMAN C160
+sp|P80009|PLMN_CANFA C161
+sp|P00759|KLK2_RAT C162
+sp|P00772|ELA1_PIG C163
+sp|P35037|TRY3_ANOGA C164
+sp|P00773|ELA1_RAT C165
+sp|Q7RTY8|TMPS7_HUMAN C166
+sp|O19023|ELA3B_MACMU C167
+sp|O46644|ELA1_MACFA C168
+sp|Q9UNI1|ELA1_HUMAN C169
+sp|Q9UKR0|KLK12_HUMAN C170
+sp|P35041|TRY7_ANOGA C171
+sp|P08861|ELA3B_HUMAN C172