JWS-112 Bumping version of T-Coffee to version 11.00.8cbe486.

[jabaws.git] / binaries / src / tcoffee / example / three_pdb.aln

diff --git a/binaries/src/tcoffee/example/three_pdb.aln b/binaries/src/tcoffee/example/three_pdb.aln
new file mode 100644 (file)
index 0000000..0ce15a2
--- /dev/null
+++ b/binaries/src/tcoffee/example/three_pdb.aln
@@ -0,0 +1,24 @@
+CLUSTAL FORMAT for T-COFFEE Version_4.32 [http://www.tcoffee.org], CPU=0.97 sec, SCORE=65, Nseq=3, Len=228 
+
+1FI8B           IIGGHEAKPHSRPYMAYLQIMYG---SKKCGGFLIREDFVLTAAHCS-GSKIQV-LGAHN
+1PPGE           IVGGRRARPHAWPFMVSLQLR-G---GHFCGATLIAPNFVMSAAHCVANVNVRVVLGAHN
+1NN6A           --GGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCA-GRSITVTLGAHN
+                  ** ..:**: *:*. *::  .   .: **. **  :**::****  . .: * *****
+
+1FI8B           IKEQEKMQQIIPVVKIIPHPAYNSKTISNDIMLLKLKSKAKRSSAVKPLNLPRRNVKVKP
+1PPGE           LSRREPTRQVFAVQRIFENG-YDPVNLLNDIVILQLNGSATINANVQVAQLPAQGRRLGN
+1NN6A           ITEEEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFPSQFNFVPP
+                :...*   * : * : : :  *:. .: :**::*:*: .*. .  *    :* :   :  
+
+1FI8B           GDVCYVAGWGKLGPMGKYSDTLQEVELTVQEDQKCESLKNYFDKANEICADPKIRASFRG
+1PPGE           GVQCLAMGWGLLGRNRGIASVLQELNVTVVTSL-C--------RRSNVCTLVRQAGVCFG
+1NN6A           GRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQACSHFRD-FDHNLQLCVGNPRKTAFKG
+                *  * . ***  *     :..***::: :     *        :  ::*.         *
+
+1FI8B           DSGGPLVCKKVAAGIVSYGQNDG--STPRAFTKVSTFLSWIKKTMK-K
+1PPGE           DSGSPLVCNGLIHGIASFVRGGCSGLYPDAFAPVAQFVNWIDSIIQ--
+1NN6A           DSGGPLLCAGVAQGIVSYGRSDA--KPPAVFTRISHYRPWINQILQAN
+                ***.**:*  :  **.*: :..     * .*: :: :  **.. ::  
+
+
+