JWS-112 Bumping version of T-Coffee to version 11.00.8cbe486.

[jabaws.git] / binaries / src / tcoffee / t_coffee_source / km_coffee / Stack.c

diff --git a/binaries/src/tcoffee/t_coffee_source/km_coffee/Stack.c b/binaries/src/tcoffee/t_coffee_source/km_coffee/Stack.c
new file mode 100644 (file)
index 0000000..16a8047
--- /dev/null
+++ b/binaries/src/tcoffee/t_coffee_source/km_coffee/Stack.c
@@ -0,0 +1,66 @@
+/******************************COPYRIGHT NOTICE*******************************/
+/*  (c) Centro de Regulacio Genomica                                                        */
+/*  and                                                                                     */
+/*  Cedric Notredame                                                                        */
+/*  12 Aug 2014 - 22:07.                                                                    */
+/*All rights reserved.                                                                      */
+/*This file is part of T-COFFEE.                                                            */
+/*                                                                                          */
+/*    T-COFFEE is free software; you can redistribute it and/or modify                      */
+/*    it under the terms of the GNU General Public License as published by                  */
+/*    the Free Software Foundation; either version 2 of the License, or                     */
+/*    (at your option) any later version.                                                   */
+/*                                                                                          */
+/*    T-COFFEE is distributed in the hope that it will be useful,                           */
+/*    but WITHOUT ANY WARRANTY; without even the implied warranty of                        */
+/*    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                         */
+/*    GNU General Public License for more details.                                          */
+/*                                                                                          */
+/*    You should have received a copy of the GNU General Public License                     */
+/*    along with Foobar; if not, write to the Free Software                                 */
+/*    Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA             */
+/*...............................................                                           */
+/*  If you need some more information                                                       */
+/*  cedric.notredame@europe.com                                                             */
+/*...............................................                                           */
+/******************************COPYRIGHT NOTICE*******************************/
+// #include "Stack.h"
+#include "km_coffee_header.h"
+
+Stack * Stack_init()
+{
+       Stack *stack = (Stack*) my_malloc(sizeof(Stack));
+       stack->reserved = 0;
+       stack->size=0;
+       stack->data=NULL;
+       stack->last=NULL;
+       return stack;
+}
+
+void push(Stack *stack, void *data)
+{
+       if (stack->reserved +1 > stack->size)
+       {
+               stack->reserved += 10;
+               stack->data=(void**) realloc(stack->data, stack->reserved);
+       }
+       stack->data[stack->size] = data;
+       stack->last=stack->data[stack->size];
+       ++stack->size;
+}
+
+void * pop(Stack *stack)
+{
+       --stack->size;
+       if (stack->size == 0)
+               stack->last=NULL;
+       else
+               stack->last=stack->data[stack->size-1];
+       return stack->data[stack->size];
+}
+
+void delStack(Stack *stack)
+{
+       free(stack->data);
+       free(stack);
+}
\ No newline at end of file