<project default="build-all" name="Build Java Bioinformatics Analysis Web Services" basedir=".">
- <property name="LD_LIBRARY_PATH" value="/gridware/sge/lib/lx24-amd64"/>
+ <property name="LD_LIBRARY_PATH" value="/gridware/sge/lib/lx-amd64"/>
+ <property name="JAVA_TARGET" value="1.7"/>
<!-- Distributive file names-->
<property name="distdir" value="website/archive"/>
<!-- copy files to class path-->
<copy file="${basedir}/log/log4j.properties" tofile="${classes}/log4j.properties" />
<!-- Complile the datamodel first -->
- <javac srcdir="${basedir}/datamodel" destdir="${classes}" target="1.8" debug="on" encoding="UTF-8" verbose="false" nowarn="true" >
+ <javac srcdir="${basedir}/datamodel" destdir="${classes}" target="${JAVA_TARGET}" debug="on" encoding="UTF-8" verbose="false" nowarn="true" >
<compilerarg value="-Xlint:unchecked"/>
<classpath refid="project.classpath" />
</javac>
<!-- Complile the engines -->
- <javac srcdir="${basedir}/engine" destdir="${classes}" target="1.8" debug="on" encoding="UTF-8" verbose="false" nowarn="true" >
+ <javac srcdir="${basedir}/engine" destdir="${classes}" target="${JAVA_TARGET}" debug="on" encoding="UTF-8" verbose="false" nowarn="true" >
<compilerarg value="-Xlint:unchecked"/>
<classpath refid="project.classpath" />
</javac>
<!-- Complile the runners -->
- <javac srcdir="${basedir}/runner" destdir="${classes}" target="1.8" debug="on" encoding="UTF-8" verbose="false" nowarn="true" >
+ <javac srcdir="${basedir}/runner" destdir="${classes}" target="${JAVA_TARGET}" debug="on" encoding="UTF-8" verbose="false" nowarn="true" >
<compilerarg value="-Xlint:unchecked"/>
<classpath refid="project.classpath" />
</javac>
<!-- Complile the webservices -->
- <javac srcdir="${basedir}/webservices" destdir="${classes}" target="1.8" debug="on" encoding="UTF-8" verbose="false" nowarn="true" >
+ <javac srcdir="${basedir}/webservices" destdir="${classes}" target="${JAVA_TARGET}" debug="on" encoding="UTF-8" verbose="false" nowarn="true" >
<compilerarg value="-Xlint:unchecked"/>
<classpath refid="project.classpath" />
</javac>
<!-- Complile the tests -->
- <javac srcdir="${basedir}/testsrc" destdir="${classes}" target="1.8" debug="on" encoding="UTF-8" verbose="false" nowarn="true" >
+ <javac srcdir="${basedir}/testsrc" destdir="${classes}" target="${JAVA_TARGET}" debug="on" encoding="UTF-8" verbose="false" nowarn="true" >
<compilerarg value="-Xlint:unchecked"/>
<classpath refid="project.classpath" />
<classpath refid="test.classpath" />
<!-- copy files to class path-->
<copy file="${basedir}/log/log4j.properties" tofile="${classes}/log4j.properties" />
<!-- Complile the datamodel first -->
- <javac srcdir="${basedir}/datamodel" destdir="${classes}" target="1.8" debug="off" optimize="on" encoding="UTF-8" verbose="false" nowarn="true">
+ <javac srcdir="${basedir}/datamodel" destdir="${classes}" target="${JAVA_TARGET}" debug="off" optimize="on" encoding="UTF-8" verbose="false" nowarn="true">
<compilerarg value="-Xlint:-unchecked" />
<classpath refid="project.classpath" />
</javac>
<!-- Complile the engines -->
- <javac srcdir="${basedir}/engine" destdir="${classes}" target="1.8" debug="off" optimize="on" encoding="UTF-8" verbose="false" nowarn="true">
+ <javac srcdir="${basedir}/engine" destdir="${classes}" target="${JAVA_TARGET}" debug="off" optimize="on" encoding="UTF-8" verbose="false" nowarn="true">
<compilerarg value="-Xlint:all" />
<compilerarg value="-Xlint:-unchecked" />
<classpath refid="project.classpath" />
</javac>
<!-- Complile the runners -->
- <javac srcdir="${basedir}/runner" destdir="${classes}" target="1.8" debug="off" optimize="on" encoding="UTF-8" verbose="false" nowarn="true">
+ <javac srcdir="${basedir}/runner" destdir="${classes}" target="${JAVA_TARGET}" debug="off" optimize="on" encoding="UTF-8" verbose="false" nowarn="true">
<compilerarg value="-Xlint:-unchecked" />
<classpath refid="project.classpath" />
</javac>
<!-- Complile the webservices -->
- <javac srcdir="${basedir}/webservices" destdir="${classes}" target="1.8" debug="off" optimize="on" encoding="UTF-8" verbose="false" nowarn="true">
+ <javac srcdir="${basedir}/webservices" destdir="${classes}" target="${JAVA_TARGET}" debug="off" optimize="on" encoding="UTF-8" verbose="false" nowarn="true">
<compilerarg value="-Xlint:-unchecked" />
<classpath refid="project.classpath" />
</javac>
</testNG>
</target>
+ <target name="Test_webservices" depends="compile_with_debug">
+ <delete file="${activity.log}"/>
+ <testNG groups="webservices" haltonfailure="true" verbose="3" enableassert="true" >
+ <jvmarg value="-server" />
+ <jvmarg value="-enableassertions" />
+ <jvmarg value="-Xms1024m" />
+ <jvmarg value="-Xmx1024m" />
+ <classfileset dir="${classes}" includes="**/*.class" />
+ <env key="LD_LIBRARY_PATH" value="${LD_LIBRARY_PATH}"/>
+ <classpath refid="test.classpath" />
+ <classpath refid="project.classpath" />
+ <sysproperty key="TestingDataPath" value="${data.src}"/>
+ </testNG>
+ </target>
+
<target name="All_cluster_independent_windows_only_tests" depends="compile_with_debug">
<delete file="${activity.log}" failonerror="false"/>
<testNG excludedgroups="cluster, non_windows" haltonfailure="true" verbose="3" enableassert="true" >
<sysproperty key="TestingDataPath" value="${data.src}"/>
</testNG>
</target>
+
+ <target name="TestAll" depends="compile_with_debug">
+ <delete file="${activity.log}"/>
+ <testNG haltonfailure="true" enableassert="true" verbose="3" >
+ <jvmarg value="-server" />
+ <jvmarg value="-enableassertions" />
+ <jvmarg value="-Xms1024m" />
+ <jvmarg value="-Xmx1024m" />
+ <classfileset dir="${classes}" includes="**/*.class" />
+ <env key="LD_LIBRARY_PATH" value="${LD_LIBRARY_PATH}"/>
+ <classpath refid="test.classpath" />
+ <classpath refid="project.classpath" />
+ <sysproperty key="TestingDataPath" value="${data.src}"/>
+ </testNG>
+ </target>
+
</project>