JAL-3397 impl.IntervalStore and nonc.IntervalStore unified api

[jalview.git] / src / jalview / datamodel / features / FeatureStoreI.java

diff --git a/src/jalview/datamodel/features/FeatureStoreI.java b/src/jalview/datamodel/features/FeatureStoreI.java
deleted file mode 100644 (file)
index fb32577..0000000
--- a/src/jalview/datamodel/features/FeatureStoreI.java
+++ /dev/null
@@ -1,58 +0,0 @@
-package jalview.datamodel.features;
-
-import jalview.datamodel.SequenceFeature;
-
-import java.util.Collection;
-import java.util.List;
-import java.util.Set;
-
-public interface FeatureStoreI
-{
-
-  boolean addFeature(SequenceFeature feature);
-
-  boolean contains(SequenceFeature feature);
-
-  boolean delete(SequenceFeature sf);
-
-  List<SequenceFeature> findOverlappingFeatures(long start, long end);
-
-  List<SequenceFeature> findOverlappingFeatures(long start, long end,
-          List<SequenceFeature> result);
-
-  List<SequenceFeature> getContactFeatures();
-
-  List<SequenceFeature> getContactFeatures(List<SequenceFeature> result);
-
-  int getFeatureCount(boolean positional);
-
-  Set<String> getFeatureGroups(boolean positionalFeatures);
-
-  Collection<SequenceFeature> getFeatures();
-
-  List<SequenceFeature> getFeaturesForGroup(boolean positional,
-          String group);
-
-  float getMaximumScore(boolean positional);
-
-  float getMinimumScore(boolean positional);
-
-  List<SequenceFeature> getNonPositionalFeatures();
-
-  List<SequenceFeature> getNonPositionalFeatures(
-          List<SequenceFeature> result);
-
-  List<SequenceFeature> getPositionalFeatures();
-
-  List<SequenceFeature> getPositionalFeatures(List<SequenceFeature> result);
-
-  int getTotalFeatureLength();
-
-  boolean isEmpty();
-
-  boolean shiftFeatures(int fromPosition, int shiftBy);
-
-  boolean listContains(List<SequenceFeature> features,
-          SequenceFeature feature);
-
-}