/*\r
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.6)\r
- * Copyright (C) 2010 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle\r
- * \r
- * This file is part of Jalview.\r
- * \r
- * Jalview is free software: you can redistribute it and/or\r
- * modify it under the terms of the GNU General Public License \r
- * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.\r
- * \r
- * Jalview is distributed in the hope that it will be useful, but \r
- * WITHOUT ANY WARRANTY; without even the implied warranty \r
- * of MERCHANTABILITY or FITNESS FOR A PARTICULAR \r
- * PURPOSE. See the GNU General Public License for more details.\r
- * \r
- * You should have received a copy of the GNU General Public License along with Jalview. If not, see <http://www.gnu.org/licenses/>.\r
+ * This class was automatically generated with \r
+ * <a href="http://www.castor.org">Castor 1.1</a>, using an XML\r
+ * Schema.\r
+ * $Id$\r
*/\r
+\r
package jalview.schemabinding.version2;\r
\r
-//---------------------------------/\r
-//- Imported classes and packages -/\r
+ //---------------------------------/\r
+ //- Imported classes and packages -/\r
//---------------------------------/\r
\r
import org.exolab.castor.xml.Marshaller;\r
* \r
* @version $Revision$ $Date$\r
*/\r
-public class Setting implements java.io.Serializable\r
-{\r
-\r
- // --------------------------/\r
- // - Class/Member Variables -/\r
- // --------------------------/\r
-\r
- /**\r
- * Field _type.\r
- */\r
- private java.lang.String _type;\r
-\r
- /**\r
- * Field _colour.\r
- */\r
- private int _colour;\r
-\r
- /**\r
- * keeps track of state for field: _colour\r
- */\r
- private boolean _has_colour;\r
-\r
- /**\r
- * Field _display.\r
- */\r
- private boolean _display;\r
-\r
- /**\r
- * keeps track of state for field: _display\r
- */\r
- private boolean _has_display;\r
-\r
- /**\r
- * Field _order.\r
- */\r
- private float _order;\r
-\r
- /**\r
- * keeps track of state for field: _order\r
- */\r
- private boolean _has_order;\r
-\r
- /**\r
- * Optional minimum colour for graduated feature colour\r
- */\r
- private int _mincolour;\r
-\r
- /**\r
- * keeps track of state for field: _mincolour\r
- */\r
- private boolean _has_mincolour;\r
-\r
- /**\r
- * threshold value for graduated feature colour\r
- */\r
- private float _threshold;\r
-\r
- /**\r
- * keeps track of state for field: _threshold\r
- */\r
- private boolean _has_threshold;\r
-\r
- /**\r
- * threshold type for graduated feature colour\r
- */\r
- private int _threshstate;\r
-\r
- /**\r
- * keeps track of state for field: _threshstate\r
- */\r
- private boolean _has_threshstate;\r
-\r
- /**\r
- * Field _max.\r
- */\r
- private float _max;\r
-\r
- /**\r
- * keeps track of state for field: _max\r
- */\r
- private boolean _has_max;\r
-\r
- /**\r
- * Field _min.\r
- */\r
- private float _min;\r
-\r
- /**\r
- * keeps track of state for field: _min\r
- */\r
- private boolean _has_min;\r
-\r
- /**\r
- * Field _colourByLabel.\r
- */\r
- private boolean _colourByLabel;\r
-\r
- /**\r
- * keeps track of state for field: _colourByLabel\r
- */\r
- private boolean _has_colourByLabel;\r
-\r
- /**\r
- * Field _autoScale.\r
- */\r
- private boolean _autoScale;\r
-\r
- /**\r
- * keeps track of state for field: _autoScale\r
- */\r
- private boolean _has_autoScale;\r
-\r
- // ----------------/\r
- // - Constructors -/\r
- // ----------------/\r
-\r
- public Setting()\r
- {\r
- super();\r
- }\r
-\r
- // -----------/\r
- // - Methods -/\r
- // -----------/\r
-\r
- /**\r
- */\r
- public void deleteAutoScale()\r
- {\r
- this._has_autoScale = false;\r
- }\r
-\r
- /**\r
- */\r
- public void deleteColour()\r
- {\r
- this._has_colour = false;\r
- }\r
-\r
- /**\r
- */\r
- public void deleteColourByLabel()\r
- {\r
- this._has_colourByLabel = false;\r
- }\r
-\r
- /**\r
- */\r
- public void deleteDisplay()\r
- {\r
- this._has_display = false;\r
- }\r
-\r
- /**\r
- */\r
- public void deleteMax()\r
- {\r
- this._has_max = false;\r
- }\r
-\r
- /**\r
- */\r
- public void deleteMin()\r
- {\r
- this._has_min = false;\r
- }\r
-\r
- /**\r
- */\r
- public void deleteMincolour()\r
- {\r
- this._has_mincolour = false;\r
- }\r
-\r
- /**\r
- */\r
- public void deleteOrder()\r
- {\r
- this._has_order = false;\r
- }\r
-\r
- /**\r
- */\r
- public void deleteThreshold()\r
- {\r
- this._has_threshold = false;\r
- }\r
-\r
- /**\r
- */\r
- public void deleteThreshstate()\r
- {\r
- this._has_threshstate = false;\r
- }\r
-\r
- /**\r
- * Returns the value of field 'autoScale'.\r
- * \r
- * @return the value of field 'AutoScale'.\r
- */\r
- public boolean getAutoScale()\r
- {\r
- return this._autoScale;\r
- }\r
-\r
- /**\r
- * Returns the value of field 'colour'.\r
- * \r
- * @return the value of field 'Colour'.\r
- */\r
- public int getColour()\r
- {\r
- return this._colour;\r
- }\r
-\r
- /**\r
- * Returns the value of field 'colourByLabel'.\r
- * \r
- * @return the value of field 'ColourByLabel'.\r
- */\r
- public boolean getColourByLabel()\r
- {\r
- return this._colourByLabel;\r
- }\r
-\r
- /**\r
- * Returns the value of field 'display'.\r
- * \r
- * @return the value of field 'Display'.\r
- */\r
- public boolean getDisplay()\r
- {\r
- return this._display;\r
- }\r
-\r
- /**\r
- * Returns the value of field 'max'.\r
- * \r
- * @return the value of field 'Max'.\r
- */\r
- public float getMax()\r
- {\r
- return this._max;\r
- }\r
-\r
- /**\r
- * Returns the value of field 'min'.\r
- * \r
- * @return the value of field 'Min'.\r
- */\r
- public float getMin()\r
- {\r
- return this._min;\r
- }\r
-\r
- /**\r
- * Returns the value of field 'mincolour'. The field 'mincolour' has the\r
- * following description: Optional minimum colour for graduated feature colour\r
- * \r
- * @return the value of field 'Mincolour'.\r
- */\r
- public int getMincolour()\r
- {\r
- return this._mincolour;\r
- }\r
-\r
- /**\r
- * Returns the value of field 'order'.\r
- * \r
- * @return the value of field 'Order'.\r
- */\r
- public float getOrder()\r
- {\r
- return this._order;\r
- }\r
-\r
- /**\r
- * Returns the value of field 'threshold'. The field 'threshold' has the\r
- * following description: threshold value for graduated feature colour\r
- * \r
- * @return the value of field 'Threshold'.\r
- */\r
- public float getThreshold()\r
- {\r
- return this._threshold;\r
- }\r
-\r
- /**\r
- * Returns the value of field 'threshstate'. The field 'threshstate' has the\r
- * following description: threshold type for graduated feature colour\r
- * \r
- * @return the value of field 'Threshstate'.\r
- */\r
- public int getThreshstate()\r
- {\r
- return this._threshstate;\r
- }\r
-\r
- /**\r
- * Returns the value of field 'type'.\r
- * \r
- * @return the value of field 'Type'.\r
- */\r
- public java.lang.String getType()\r
- {\r
- return this._type;\r
- }\r
-\r
- /**\r
- * Method hasAutoScale.\r
- * \r
- * @return true if at least one AutoScale has been added\r
- */\r
- public boolean hasAutoScale()\r
- {\r
- return this._has_autoScale;\r
- }\r
-\r
- /**\r
- * Method hasColour.\r
- * \r
- * @return true if at least one Colour has been added\r
- */\r
- public boolean hasColour()\r
- {\r
- return this._has_colour;\r
- }\r
-\r
- /**\r
- * Method hasColourByLabel.\r
- * \r
- * @return true if at least one ColourByLabel has been added\r
- */\r
- public boolean hasColourByLabel()\r
- {\r
- return this._has_colourByLabel;\r
- }\r
-\r
- /**\r
- * Method hasDisplay.\r
- * \r
- * @return true if at least one Display has been added\r
- */\r
- public boolean hasDisplay()\r
- {\r
- return this._has_display;\r
- }\r
-\r
- /**\r
- * Method hasMax.\r
- * \r
- * @return true if at least one Max has been added\r
- */\r
- public boolean hasMax()\r
- {\r
- return this._has_max;\r
- }\r
-\r
- /**\r
- * Method hasMin.\r
- * \r
- * @return true if at least one Min has been added\r
- */\r
- public boolean hasMin()\r
- {\r
- return this._has_min;\r
- }\r
-\r
- /**\r
- * Method hasMincolour.\r
- * \r
- * @return true if at least one Mincolour has been added\r
- */\r
- public boolean hasMincolour()\r
- {\r
- return this._has_mincolour;\r
- }\r
-\r
- /**\r
- * Method hasOrder.\r
- * \r
- * @return true if at least one Order has been added\r
- */\r
- public boolean hasOrder()\r
- {\r
- return this._has_order;\r
- }\r
-\r
- /**\r
- * Method hasThreshold.\r
- * \r
- * @return true if at least one Threshold has been added\r
- */\r
- public boolean hasThreshold()\r
- {\r
- return this._has_threshold;\r
- }\r
-\r
- /**\r
- * Method hasThreshstate.\r
- * \r
- * @return true if at least one Threshstate has been added\r
- */\r
- public boolean hasThreshstate()\r
- {\r
- return this._has_threshstate;\r
- }\r
-\r
- /**\r
- * Returns the value of field 'autoScale'.\r
- * \r
- * @return the value of field 'AutoScale'.\r
- */\r
- public boolean isAutoScale()\r
- {\r
- return this._autoScale;\r
- }\r
-\r
- /**\r
- * Returns the value of field 'colourByLabel'.\r
- * \r
- * @return the value of field 'ColourByLabel'.\r
- */\r
- public boolean isColourByLabel()\r
- {\r
- return this._colourByLabel;\r
- }\r
-\r
- /**\r
- * Returns the value of field 'display'.\r
- * \r
- * @return the value of field 'Display'.\r
- */\r
- public boolean isDisplay()\r
- {\r
- return this._display;\r
- }\r
-\r
- /**\r
- * Method isValid.\r
- * \r
- * @return true if this object is valid according to the schema\r
- */\r
- public boolean isValid()\r
- {\r
- try\r
- {\r
- validate();\r
- } catch (org.exolab.castor.xml.ValidationException vex)\r
- {\r
- return false;\r
- }\r
- return true;\r
- }\r
-\r
- /**\r
- * \r
- * \r
- * @param out\r
- * @throws org.exolab.castor.xml.MarshalException\r
- * if object is null or if any SAXException is thrown during\r
- * marshaling\r
- * @throws org.exolab.castor.xml.ValidationException\r
- * if this object is an invalid instance according to the schema\r
- */\r
- public void marshal(final java.io.Writer out)\r
- throws org.exolab.castor.xml.MarshalException,\r
- org.exolab.castor.xml.ValidationException\r
- {\r
- Marshaller.marshal(this, out);\r
- }\r
-\r
- /**\r
- * \r
- * \r
- * @param handler\r
- * @throws java.io.IOException\r
- * if an IOException occurs during marshaling\r
- * @throws org.exolab.castor.xml.ValidationException\r
- * if this object is an invalid instance according to the schema\r
- * @throws org.exolab.castor.xml.MarshalException\r
- * if object is null or if any SAXException is thrown during\r
- * marshaling\r
- */\r
- public void marshal(final org.xml.sax.ContentHandler handler)\r
- throws java.io.IOException,\r
- org.exolab.castor.xml.MarshalException,\r
- org.exolab.castor.xml.ValidationException\r
- {\r
- Marshaller.marshal(this, handler);\r
- }\r
-\r
- /**\r
- * Sets the value of field 'autoScale'.\r
- * \r
- * @param autoScale\r
- * the value of field 'autoScale'.\r
- */\r
- public void setAutoScale(final boolean autoScale)\r
- {\r
- this._autoScale = autoScale;\r
- this._has_autoScale = true;\r
- }\r
-\r
- /**\r
- * Sets the value of field 'colour'.\r
- * \r
- * @param colour\r
- * the value of field 'colour'.\r
- */\r
- public void setColour(final int colour)\r
- {\r
- this._colour = colour;\r
- this._has_colour = true;\r
- }\r
-\r
- /**\r
- * Sets the value of field 'colourByLabel'.\r
- * \r
- * @param colourByLabel\r
- * the value of field 'colourByLabel'.\r
- */\r
- public void setColourByLabel(final boolean colourByLabel)\r
- {\r
- this._colourByLabel = colourByLabel;\r
- this._has_colourByLabel = true;\r
- }\r
-\r
- /**\r
- * Sets the value of field 'display'.\r
- * \r
- * @param display\r
- * the value of field 'display'.\r
- */\r
- public void setDisplay(final boolean display)\r
- {\r
- this._display = display;\r
- this._has_display = true;\r
- }\r
-\r
- /**\r
- * Sets the value of field 'max'.\r
- * \r
- * @param max\r
- * the value of field 'max'.\r
- */\r
- public void setMax(final float max)\r
- {\r
- this._max = max;\r
- this._has_max = true;\r
- }\r
-\r
- /**\r
- * Sets the value of field 'min'.\r
- * \r
- * @param min\r
- * the value of field 'min'.\r
- */\r
- public void setMin(final float min)\r
- {\r
- this._min = min;\r
- this._has_min = true;\r
- }\r
-\r
- /**\r
- * Sets the value of field 'mincolour'. The field 'mincolour' has the\r
- * following description: Optional minimum colour for graduated feature colour\r
- * \r
- * @param mincolour\r
- * the value of field 'mincolour'.\r
- */\r
- public void setMincolour(final int mincolour)\r
- {\r
- this._mincolour = mincolour;\r
- this._has_mincolour = true;\r
- }\r
-\r
- /**\r
- * Sets the value of field 'order'.\r
- * \r
- * @param order\r
- * the value of field 'order'.\r
- */\r
- public void setOrder(final float order)\r
- {\r
- this._order = order;\r
- this._has_order = true;\r
- }\r
-\r
- /**\r
- * Sets the value of field 'threshold'. The field 'threshold' has the\r
- * following description: threshold value for graduated feature colour\r
- * \r
- * @param threshold\r
- * the value of field 'threshold'.\r
- */\r
- public void setThreshold(final float threshold)\r
- {\r
- this._threshold = threshold;\r
- this._has_threshold = true;\r
- }\r
-\r
- /**\r
- * Sets the value of field 'threshstate'. The field 'threshstate' has the\r
- * following description: threshold type for graduated feature colour\r
- * \r
- * @param threshstate\r
- * the value of field 'threshstate'.\r
- */\r
- public void setThreshstate(final int threshstate)\r
- {\r
- this._threshstate = threshstate;\r
- this._has_threshstate = true;\r
- }\r
-\r
- /**\r
- * Sets the value of field 'type'.\r
- * \r
- * @param type\r
- * the value of field 'type'.\r
- */\r
- public void setType(final java.lang.String type)\r
- {\r
- this._type = type;\r
- }\r
-\r
- /**\r
- * Method unmarshal.\r
- * \r
- * @param reader\r
- * @throws org.exolab.castor.xml.MarshalException\r
- * if object is null or if any SAXException is thrown during\r
- * marshaling\r
- * @throws org.exolab.castor.xml.ValidationException\r
- * if this object is an invalid instance according to the schema\r
- * @return the unmarshaled jalview.schemabinding.version2.Settin\r
- */\r
- public static jalview.schemabinding.version2.Setting unmarshal(\r
- final java.io.Reader reader)\r
- throws org.exolab.castor.xml.MarshalException,\r
- org.exolab.castor.xml.ValidationException\r
- {\r
- return (jalview.schemabinding.version2.Setting) Unmarshaller.unmarshal(\r
- jalview.schemabinding.version2.Setting.class, reader);\r
- }\r
-\r
- /**\r
- * \r
- * \r
- * @throws org.exolab.castor.xml.ValidationException\r
- * if this object is an invalid instance according to the schema\r
- */\r
- public void validate() throws org.exolab.castor.xml.ValidationException\r
- {\r
- org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator();\r
- validator.validate(this);\r
- }\r
+public class Setting implements java.io.Serializable {\r
+\r
+\r
+ //--------------------------/\r
+ //- Class/Member Variables -/\r
+ //--------------------------/\r
+\r
+ /**\r
+ * Field _type.\r
+ */\r
+ private java.lang.String _type;\r
+\r
+ /**\r
+ * Field _colour.\r
+ */\r
+ private int _colour;\r
+\r
+ /**\r
+ * keeps track of state for field: _colour\r
+ */\r
+ private boolean _has_colour;\r
+\r
+ /**\r
+ * Field _display.\r
+ */\r
+ private boolean _display;\r
+\r
+ /**\r
+ * keeps track of state for field: _display\r
+ */\r
+ private boolean _has_display;\r
+\r
+ /**\r
+ * Field _order.\r
+ */\r
+ private float _order;\r
+\r
+ /**\r
+ * keeps track of state for field: _order\r
+ */\r
+ private boolean _has_order;\r
+\r
+ /**\r
+ * Optional minimum colour for graduated feature colour\r
+ */\r
+ private int _mincolour;\r
+\r
+ /**\r
+ * keeps track of state for field: _mincolour\r
+ */\r
+ private boolean _has_mincolour;\r
+\r
+ /**\r
+ * threshold value for graduated feature colour\r
+ */\r
+ private float _threshold;\r
+\r
+ /**\r
+ * keeps track of state for field: _threshold\r
+ */\r
+ private boolean _has_threshold;\r
+\r
+ /**\r
+ * threshold type for graduated feature colour\r
+ */\r
+ private int _threshstate;\r
+\r
+ /**\r
+ * keeps track of state for field: _threshstate\r
+ */\r
+ private boolean _has_threshstate;\r
+\r
+ /**\r
+ * Field _max.\r
+ */\r
+ private float _max;\r
+\r
+ /**\r
+ * keeps track of state for field: _max\r
+ */\r
+ private boolean _has_max;\r
+\r
+ /**\r
+ * Field _min.\r
+ */\r
+ private float _min;\r
+\r
+ /**\r
+ * keeps track of state for field: _min\r
+ */\r
+ private boolean _has_min;\r
+\r
+ /**\r
+ * Field _colourByLabel.\r
+ */\r
+ private boolean _colourByLabel;\r
+\r
+ /**\r
+ * keeps track of state for field: _colourByLabel\r
+ */\r
+ private boolean _has_colourByLabel;\r
+\r
+ /**\r
+ * Field _autoScale.\r
+ */\r
+ private boolean _autoScale;\r
+\r
+ /**\r
+ * keeps track of state for field: _autoScale\r
+ */\r
+ private boolean _has_autoScale;\r
+\r
+\r
+ //----------------/\r
+ //- Constructors -/\r
+ //----------------/\r
+\r
+ public Setting() {\r
+ super();\r
+ }\r
+\r
+\r
+ //-----------/\r
+ //- Methods -/\r
+ //-----------/\r
+\r
+ /**\r
+ */\r
+ public void deleteAutoScale(\r
+ ) {\r
+ this._has_autoScale= false;\r
+ }\r
+\r
+ /**\r
+ */\r
+ public void deleteColour(\r
+ ) {\r
+ this._has_colour= false;\r
+ }\r
+\r
+ /**\r
+ */\r
+ public void deleteColourByLabel(\r
+ ) {\r
+ this._has_colourByLabel= false;\r
+ }\r
+\r
+ /**\r
+ */\r
+ public void deleteDisplay(\r
+ ) {\r
+ this._has_display= false;\r
+ }\r
+\r
+ /**\r
+ */\r
+ public void deleteMax(\r
+ ) {\r
+ this._has_max= false;\r
+ }\r
+\r
+ /**\r
+ */\r
+ public void deleteMin(\r
+ ) {\r
+ this._has_min= false;\r
+ }\r
+\r
+ /**\r
+ */\r
+ public void deleteMincolour(\r
+ ) {\r
+ this._has_mincolour= false;\r
+ }\r
+\r
+ /**\r
+ */\r
+ public void deleteOrder(\r
+ ) {\r
+ this._has_order= false;\r
+ }\r
+\r
+ /**\r
+ */\r
+ public void deleteThreshold(\r
+ ) {\r
+ this._has_threshold= false;\r
+ }\r
+\r
+ /**\r
+ */\r
+ public void deleteThreshstate(\r
+ ) {\r
+ this._has_threshstate= false;\r
+ }\r
+\r
+ /**\r
+ * Returns the value of field 'autoScale'.\r
+ * \r
+ * @return the value of field 'AutoScale'.\r
+ */\r
+ public boolean getAutoScale(\r
+ ) {\r
+ return this._autoScale;\r
+ }\r
+\r
+ /**\r
+ * Returns the value of field 'colour'.\r
+ * \r
+ * @return the value of field 'Colour'.\r
+ */\r
+ public int getColour(\r
+ ) {\r
+ return this._colour;\r
+ }\r
+\r
+ /**\r
+ * Returns the value of field 'colourByLabel'.\r
+ * \r
+ * @return the value of field 'ColourByLabel'.\r
+ */\r
+ public boolean getColourByLabel(\r
+ ) {\r
+ return this._colourByLabel;\r
+ }\r
+\r
+ /**\r
+ * Returns the value of field 'display'.\r
+ * \r
+ * @return the value of field 'Display'.\r
+ */\r
+ public boolean getDisplay(\r
+ ) {\r
+ return this._display;\r
+ }\r
+\r
+ /**\r
+ * Returns the value of field 'max'.\r
+ * \r
+ * @return the value of field 'Max'.\r
+ */\r
+ public float getMax(\r
+ ) {\r
+ return this._max;\r
+ }\r
+\r
+ /**\r
+ * Returns the value of field 'min'.\r
+ * \r
+ * @return the value of field 'Min'.\r
+ */\r
+ public float getMin(\r
+ ) {\r
+ return this._min;\r
+ }\r
+\r
+ /**\r
+ * Returns the value of field 'mincolour'. The field\r
+ * 'mincolour' has the following description: Optional minimum\r
+ * colour for graduated feature colour\r
+ * \r
+ * @return the value of field 'Mincolour'.\r
+ */\r
+ public int getMincolour(\r
+ ) {\r
+ return this._mincolour;\r
+ }\r
+\r
+ /**\r
+ * Returns the value of field 'order'.\r
+ * \r
+ * @return the value of field 'Order'.\r
+ */\r
+ public float getOrder(\r
+ ) {\r
+ return this._order;\r
+ }\r
+\r
+ /**\r
+ * Returns the value of field 'threshold'. The field\r
+ * 'threshold' has the following description: threshold value\r
+ * for graduated feature colour\r
+ * \r
+ * @return the value of field 'Threshold'.\r
+ */\r
+ public float getThreshold(\r
+ ) {\r
+ return this._threshold;\r
+ }\r
+\r
+ /**\r
+ * Returns the value of field 'threshstate'. The field\r
+ * 'threshstate' has the following description: threshold type\r
+ * for graduated feature colour\r
+ * \r
+ * @return the value of field 'Threshstate'.\r
+ */\r
+ public int getThreshstate(\r
+ ) {\r
+ return this._threshstate;\r
+ }\r
+\r
+ /**\r
+ * Returns the value of field 'type'.\r
+ * \r
+ * @return the value of field 'Type'.\r
+ */\r
+ public java.lang.String getType(\r
+ ) {\r
+ return this._type;\r
+ }\r
+\r
+ /**\r
+ * Method hasAutoScale.\r
+ * \r
+ * @return true if at least one AutoScale has been added\r
+ */\r
+ public boolean hasAutoScale(\r
+ ) {\r
+ return this._has_autoScale;\r
+ }\r
+\r
+ /**\r
+ * Method hasColour.\r
+ * \r
+ * @return true if at least one Colour has been added\r
+ */\r
+ public boolean hasColour(\r
+ ) {\r
+ return this._has_colour;\r
+ }\r
+\r
+ /**\r
+ * Method hasColourByLabel.\r
+ * \r
+ * @return true if at least one ColourByLabel has been added\r
+ */\r
+ public boolean hasColourByLabel(\r
+ ) {\r
+ return this._has_colourByLabel;\r
+ }\r
+\r
+ /**\r
+ * Method hasDisplay.\r
+ * \r
+ * @return true if at least one Display has been added\r
+ */\r
+ public boolean hasDisplay(\r
+ ) {\r
+ return this._has_display;\r
+ }\r
+\r
+ /**\r
+ * Method hasMax.\r
+ * \r
+ * @return true if at least one Max has been added\r
+ */\r
+ public boolean hasMax(\r
+ ) {\r
+ return this._has_max;\r
+ }\r
+\r
+ /**\r
+ * Method hasMin.\r
+ * \r
+ * @return true if at least one Min has been added\r
+ */\r
+ public boolean hasMin(\r
+ ) {\r
+ return this._has_min;\r
+ }\r
+\r
+ /**\r
+ * Method hasMincolour.\r
+ * \r
+ * @return true if at least one Mincolour has been added\r
+ */\r
+ public boolean hasMincolour(\r
+ ) {\r
+ return this._has_mincolour;\r
+ }\r
+\r
+ /**\r
+ * Method hasOrder.\r
+ * \r
+ * @return true if at least one Order has been added\r
+ */\r
+ public boolean hasOrder(\r
+ ) {\r
+ return this._has_order;\r
+ }\r
+\r
+ /**\r
+ * Method hasThreshold.\r
+ * \r
+ * @return true if at least one Threshold has been added\r
+ */\r
+ public boolean hasThreshold(\r
+ ) {\r
+ return this._has_threshold;\r
+ }\r
+\r
+ /**\r
+ * Method hasThreshstate.\r
+ * \r
+ * @return true if at least one Threshstate has been added\r
+ */\r
+ public boolean hasThreshstate(\r
+ ) {\r
+ return this._has_threshstate;\r
+ }\r
+\r
+ /**\r
+ * Returns the value of field 'autoScale'.\r
+ * \r
+ * @return the value of field 'AutoScale'.\r
+ */\r
+ public boolean isAutoScale(\r
+ ) {\r
+ return this._autoScale;\r
+ }\r
+\r
+ /**\r
+ * Returns the value of field 'colourByLabel'.\r
+ * \r
+ * @return the value of field 'ColourByLabel'.\r
+ */\r
+ public boolean isColourByLabel(\r
+ ) {\r
+ return this._colourByLabel;\r
+ }\r
+\r
+ /**\r
+ * Returns the value of field 'display'.\r
+ * \r
+ * @return the value of field 'Display'.\r
+ */\r
+ public boolean isDisplay(\r
+ ) {\r
+ return this._display;\r
+ }\r
+\r
+ /**\r
+ * Method isValid.\r
+ * \r
+ * @return true if this object is valid according to the schema\r
+ */\r
+ public boolean isValid(\r
+ ) {\r
+ try {\r
+ validate();\r
+ } catch (org.exolab.castor.xml.ValidationException vex) {\r
+ return false;\r
+ }\r
+ return true;\r
+ }\r
+\r
+ /**\r
+ * \r
+ * \r
+ * @param out\r
+ * @throws org.exolab.castor.xml.MarshalException if object is\r
+ * null or if any SAXException is thrown during marshaling\r
+ * @throws org.exolab.castor.xml.ValidationException if this\r
+ * object is an invalid instance according to the schema\r
+ */\r
+ public void marshal(\r
+ final java.io.Writer out)\r
+ throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException {\r
+ Marshaller.marshal(this, out);\r
+ }\r
+\r
+ /**\r
+ * \r
+ * \r
+ * @param handler\r
+ * @throws java.io.IOException if an IOException occurs during\r
+ * marshaling\r
+ * @throws org.exolab.castor.xml.ValidationException if this\r
+ * object is an invalid instance according to the schema\r
+ * @throws org.exolab.castor.xml.MarshalException if object is\r
+ * null or if any SAXException is thrown during marshaling\r
+ */\r
+ public void marshal(\r
+ final org.xml.sax.ContentHandler handler)\r
+ throws java.io.IOException, org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException {\r
+ Marshaller.marshal(this, handler);\r
+ }\r
+\r
+ /**\r
+ * Sets the value of field 'autoScale'.\r
+ * \r
+ * @param autoScale the value of field 'autoScale'.\r
+ */\r
+ public void setAutoScale(\r
+ final boolean autoScale) {\r
+ this._autoScale = autoScale;\r
+ this._has_autoScale = true;\r
+ }\r
+\r
+ /**\r
+ * Sets the value of field 'colour'.\r
+ * \r
+ * @param colour the value of field 'colour'.\r
+ */\r
+ public void setColour(\r
+ final int colour) {\r
+ this._colour = colour;\r
+ this._has_colour = true;\r
+ }\r
+\r
+ /**\r
+ * Sets the value of field 'colourByLabel'.\r
+ * \r
+ * @param colourByLabel the value of field 'colourByLabel'.\r
+ */\r
+ public void setColourByLabel(\r
+ final boolean colourByLabel) {\r
+ this._colourByLabel = colourByLabel;\r
+ this._has_colourByLabel = true;\r
+ }\r
+\r
+ /**\r
+ * Sets the value of field 'display'.\r
+ * \r
+ * @param display the value of field 'display'.\r
+ */\r
+ public void setDisplay(\r
+ final boolean display) {\r
+ this._display = display;\r
+ this._has_display = true;\r
+ }\r
+\r
+ /**\r
+ * Sets the value of field 'max'.\r
+ * \r
+ * @param max the value of field 'max'.\r
+ */\r
+ public void setMax(\r
+ final float max) {\r
+ this._max = max;\r
+ this._has_max = true;\r
+ }\r
+\r
+ /**\r
+ * Sets the value of field 'min'.\r
+ * \r
+ * @param min the value of field 'min'.\r
+ */\r
+ public void setMin(\r
+ final float min) {\r
+ this._min = min;\r
+ this._has_min = true;\r
+ }\r
+\r
+ /**\r
+ * Sets the value of field 'mincolour'. The field 'mincolour'\r
+ * has the following description: Optional minimum colour for\r
+ * graduated feature colour\r
+ * \r
+ * @param mincolour the value of field 'mincolour'.\r
+ */\r
+ public void setMincolour(\r
+ final int mincolour) {\r
+ this._mincolour = mincolour;\r
+ this._has_mincolour = true;\r
+ }\r
+\r
+ /**\r
+ * Sets the value of field 'order'.\r
+ * \r
+ * @param order the value of field 'order'.\r
+ */\r
+ public void setOrder(\r
+ final float order) {\r
+ this._order = order;\r
+ this._has_order = true;\r
+ }\r
+\r
+ /**\r
+ * Sets the value of field 'threshold'. The field 'threshold'\r
+ * has the following description: threshold value for graduated\r
+ * feature colour\r
+ * \r
+ * @param threshold the value of field 'threshold'.\r
+ */\r
+ public void setThreshold(\r
+ final float threshold) {\r
+ this._threshold = threshold;\r
+ this._has_threshold = true;\r
+ }\r
+\r
+ /**\r
+ * Sets the value of field 'threshstate'. The field\r
+ * 'threshstate' has the following description: threshold type\r
+ * for graduated feature colour\r
+ * \r
+ * @param threshstate the value of field 'threshstate'.\r
+ */\r
+ public void setThreshstate(\r
+ final int threshstate) {\r
+ this._threshstate = threshstate;\r
+ this._has_threshstate = true;\r
+ }\r
+\r
+ /**\r
+ * Sets the value of field 'type'.\r
+ * \r
+ * @param type the value of field 'type'.\r
+ */\r
+ public void setType(\r
+ final java.lang.String type) {\r
+ this._type = type;\r
+ }\r
+\r
+ /**\r
+ * Method unmarshal.\r
+ * \r
+ * @param reader\r
+ * @throws org.exolab.castor.xml.MarshalException if object is\r
+ * null or if any SAXException is thrown during marshaling\r
+ * @throws org.exolab.castor.xml.ValidationException if this\r
+ * object is an invalid instance according to the schema\r
+ * @return the unmarshaled jalview.schemabinding.version2.Settin\r
+ */\r
+ public static jalview.schemabinding.version2.Setting unmarshal(\r
+ final java.io.Reader reader)\r
+ throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException {\r
+ return (jalview.schemabinding.version2.Setting) Unmarshaller.unmarshal(jalview.schemabinding.version2.Setting.class, reader);\r
+ }\r
+\r
+ /**\r
+ * \r
+ * \r
+ * @throws org.exolab.castor.xml.ValidationException if this\r
+ * object is an invalid instance according to the schema\r
+ */\r
+ public void validate(\r
+ )\r
+ throws org.exolab.castor.xml.ValidationException {\r
+ org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator();\r
+ validator.validate(this);\r
+ }\r
\r
}\r
git://source.jalview.org / jalview.git / blobdiff