--- /dev/null
+<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
+<runConfiguration>
+ <taskId>@Tcoffee#9974534735170965</taskId>
+ <workDirectory>/cluster/gjb_lab/fc/www-jws2/jaba/jobsout/@Tcoffee#9974534735170965</workDirectory>
+ <parameters>
+ <paramList>
+ <entry>
+ <key>-output</key>
+ <value>
+ <position>-1</position>
+ <name>-output</name>
+ <value>clustalw</value>
+ </value>
+ </entry>
+ <entry>
+ <key>-seq</key>
+ <value>
+ <position>-1</position>
+ <name>-seq</name>
+ <value>fasta.in</value>
+ </value>
+ </entry>
+ <entry>
+ <key>-n_core</key>
+ <value>
+ <position>-1</position>
+ <name>-n_core</name>
+ <value>4</value>
+ </value>
+ </entry>
+ </paramList>
+ <nameValueSeparator>=</nameValueSeparator>
+ </parameters>
+ <error>error.txt</error>
+ <output>fasta.out</output>
+ <input>/cluster/gjb_lab/fc/www-jws2/jaba/jobsout/@Tcoffee#9974534735170965/fasta.in</input>
+ <runnerClassName>compbio.runner.msa.Tcoffee</runnerClassName>
+</runConfiguration>