--- /dev/null
+<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
+<runConfiguration>
+ <taskId>Probcons#808615105294204</taskId>
+ <workDirectory>/cluster/gjb_lab/fc/www-jws2/jaba/local_jobsout/Probcons#808615105294204</workDirectory>
+ <parameters>
+ <paramList>
+ <entry>
+ <key>-v</key>
+ <value>
+ <position>-1</position>
+ <name>-v</name>
+ </value>
+ </entry>
+ <entry>
+ <key>-clustalw</key>
+ <value>
+ <position>-1</position>
+ <name>-clustalw</name>
+ </value>
+ </entry>
+ <entry>
+ <key>-annot</key>
+ <value>
+ <position>-1</position>
+ <name>-annot</name>
+ </value>
+ </entry>
+ <entry>
+ <key>annotation.txt</key>
+ <value>
+ <position>-1</position>
+ <name>annotation.txt</name>
+ </value>
+ </entry>
+ <entry>
+ <key>fasta.in</key>
+ <value>
+ <position>-1</position>
+ <name>fasta.in</name>
+ </value>
+ </entry>
+ </paramList>
+ <nameValueSeparator> </nameValueSeparator>
+ </parameters>
+ <error>error.txt</error>
+ <output>alignment.out</output>
+ <input>/cluster/gjb_lab/fc/www-jws2/jaba/local_jobsout/Probcons#808615105294204/fasta.in</input>
+ <runnerClassName>compbio.runner.msa.Probcons</runnerClassName>
+</runConfiguration>