+++ /dev/null
-/******************************************************************
- Copyright 2006 by Michael Farrar. All rights reserved.
- This program may not be sold or incorporated into a commercial product,
- in whole or in part, without written consent of Michael Farrar. For
- further information regarding permission for use or reproduction, please
- contact: Michael Farrar at farrar.michael@gmail.com.
-*******************************************************************/
-
-/*
- Written by Michael Farrar, 2006.
- Please send bug reports and/or suggestions to farrar.michael@gmail.com.
-*/
-
-#ifndef SMITH_WATERMAN_SSE2_H
-#define SMITH_WATERMAN_SSE2_H
-
-int
-smith_waterman_sse2_word(const unsigned char * query_sequence,
- unsigned short * query_profile_word,
- const int query_length,
- const unsigned char * db_sequence,
- const int db_length,
- unsigned short gap_open,
- unsigned short gap_extend,
- struct f_struct * f_str);
-
-
-int
-smith_waterman_sse2_byte(const unsigned char * query_sequence,
- unsigned char * query_profile_byte,
- const int query_length,
- const unsigned char * db_sequence,
- const int db_length,
- unsigned char bias,
- unsigned char gap_open,
- unsigned char gap_extend,
- struct f_struct * f_str);
-
-#endif /* SMITH_WATERMAN_SSE2_H */