relocate pre-compiled executables from binaries folder

[jabaws.git] / website / archive / binaries / linux_x86 / fasta34 / Makefile.nmk_icl

diff --git a/website/archive/binaries/linux_x86/fasta34/Makefile.nmk_icl b/website/archive/binaries/linux_x86/fasta34/Makefile.nmk_icl
new file mode 100644 (file)
index 0000000..d64d1a4
--- /dev/null
+++ b/website/archive/binaries/linux_x86/fasta34/Makefile.nmk_icl
@@ -0,0 +1,34 @@
+#
+# makefile for fasta3, fasta3_t.  Use makefile.pvm for pvcompxx.
+#
+# options for Intel C compiler (v9.1) 
+#
+# must be compiled/linked with /MT (or /MTd for debugging) to ensure
+# multi-threaded staticly linked executables.  /MD uses dynamic
+# linking to DLL's, which may not be available on the users machine
+
+CC= icl /O2 /MT /W1
+#CC= icl /Zi /MTd /W1
+CL= icl /O2 /MT
+#CL= icl /Zi /MTd
+
+# standard options
+CFLAGS= -DSHOWSIM -DWIN32 -DHZ=100 -DPROGRESS -DSAMP_STATS -DPGM_DOC -DTHR_EXIT=pthread_exit -D_CRT_SECURE_NO_WARNINGS=1
+
+XDIR = /seqprg/bin
+
+THR_SUBS = pthr_subs2
+THR_LIBS= pthreadVC2.lib
+
+DROPNFA_O = drop_nfa.obj
+DROPGSW_O = dropgsw.obj
+DROPGSW_SSE2_O = dropgsw_sse2.obj smith_waterman_sse2.obj
+DROPRSS_O = dropnsw.obj
+DROPRSS_SSE2_O = dropgsw_sse2.obj smith_waterman_sse2.obj
+# 
+
+# renamed (fasta33)  programs
+include Makefile34.nmk_com
+# conventional (fasta3) names
+# include Makefile.common
+