--- /dev/null
+2010-06-17 Release 0.0.1 (Dubliniensis)
+
+ First "release" as program has been able for a while to perform
+ all basic tasks without problems.
+
+ Non-standard features already built-in include:
+ HMM-iteration (using HMMER for building an HMM) and guide-tree
+ iteration. On top of that HMM input works fine and
+ background-frequencies are added to the HHalign process.
+
+ Known issues: RNA/DNA alignment is considered buggy. Aligned
+ sequences have to be dealigned for HHalign to work properly.
+
+ The HMMER version message can be ignored if no HMM-iteration
+ was used.