Delete unneeded directory

[jabaws.git] / website / archive / binaries / mac / src / clustalo / src / clustal / util.h

diff --git a/website/archive/binaries/mac/src/clustalo/src/clustal/util.h b/website/archive/binaries/mac/src/clustalo/src/clustal/util.h
deleted file mode 100644 (file)
index 2d29115..0000000
--- a/website/archive/binaries/mac/src/clustalo/src/clustal/util.h
+++ /dev/null
@@ -1,76 +0,0 @@
-/*********************************************************************
- * Clustal Omega - Multiple sequence alignment
- *
- * Copyright (C) 2010 University College Dublin
- *
- * Clustal-Omega is free software; you can redistribute it and/or
- * modify it under the terms of the GNU General Public License as
- * published by the Free Software Foundation; either version 2 of the
- * License, or (at your option) any later version.
- *
- * This file is part of Clustal-Omega.
- *
- ********************************************************************/
-
-/*
- *  RCS $Id: util.h 230 2011-04-09 15:37:50Z andreas $
- */
-
-#include <limits.h>
-#include <string.h>
-#include <strings.h>
-#include <stdarg.h>
-#include <stdbool.h>
-
-#ifndef CLUSTALO_UTIL_H
-#define CLUSTALO_UTIL_H
-
-
-#define CKMALLOC(b) CkMalloc((b), __FUNCTION__, __LINE__)
-#define CKCALLOC(c, s) CkCalloc((c), (s), __FUNCTION__, __LINE__)
-#define CKREALLOC(p, b) CkRealloc((p), (b), __FUNCTION__, __LINE__)
-#define CKFREE(b) ((b)=CkFree((b), __FUNCTION__, __LINE__))
-
-#ifndef MAX
-#define MAX(a,b) ((a)>(b)?(a):(b))
-#endif
-#ifndef MIN
-#define MIN(a,b) ((a)<(b)?(a):(b))
-#endif
-
-/* STR_EQ: strings are equal, case sensitive */
-#define STR_EQ(a,b)         (strcmp((a),(b)) == 0)
-/*  STR_NC_EQ: strings are equal, ignoring case */
-#define STR_NC_EQ(a,b)      (strcasecmp((a),(b)) == 0)
-
-
-/* type boolean and false and true defined in stdbool.h */
-#ifndef TRUE
-#define TRUE true
-#endif
-#ifndef FALSE
-#define FALSE false
-#endif
-
-/* clashes with hhalign
-#define FAIL -1
-#define OK 0
-*/
-
-
-
-/* don't use the following directly; use macros provided above instead
- */
-void *CkMalloc(size_t size, const char *function, const int line);
-void *CkCalloc(size_t count, size_t size, const char *function, const int line);
-void *CkRealloc(void *ptr, size_t bytes, const char *function, const int line);
-void *CkFree(void *ptr, const char *function, const int line);
-char *CkStrdup(const char *s);
-void PermutationArray(int **array, const int len);
-void RandomUniqueIntArray(int *array, const int array_len, const int max_value);
-int IntCmp(const void *a, const void *b);
-bool FileIsWritable(char *pcFileName);
-void QSortAndTrackIndex(int *piSortedIndices, int *piArrayToSort,
-                        const int uArrayLen, const char cOrder, const bool bOverwriteArrayToSort);
-
-#endif