+++ /dev/null
-# Some useful automake documentation:
-# http://www.openismus.com/documents/linux/automake/automake.shtml
-# http://www.bioinf.uni-freiburg.de/~mmann/HowTo/automake.html
-
-#SUBDIRS =
-#EXTRA_DIST =
-# LDADD = foofiles/libfoo.a
-
-AM_CXXFLAGS = -fno-strict-aliasing -DCLUSTALO -DCLUSTALO_NOFILE -DDEFAULT_FILTER=90 @OPENMP_CXXFLAGS@ @AM_CXXFLAGS@
-
-noinst_LTLIBRARIES = libhhalign.la
-
-libhhalign_la_SOURCES = hhalign.cpp hhalign.h \
- hash-C.h hash.h hhdecl-C.h hhfunc-C.h hhfunc.h \
- hhmatrices-C.h hhutil-C.h \
- hhalignment-C.h hhalignment.h \
- hhfullalignment-C.h hhfullalignment.h \
- hhhalfalignment-C.h hhhalfalignment.h \
- hhhit-C.h hhhit.h hhhitlist-C.h hhhitlist.h \
- hhhmm-C.h hhhmm.h \
- util-C.h list-C.h list.h \
- general.h
-
-library_includedir=$(includedir)/clustalo/hhalign
-
-library_include_HEADERS = general.h hhfunc.h