Delete unneeded directory

[jabaws.git] / website / archive / binaries / mac / src / clustalw / src / general / Array2D.h

diff --git a/website/archive/binaries/mac/src/clustalw/src/general/Array2D.h b/website/archive/binaries/mac/src/clustalw/src/general/Array2D.h
deleted file mode 100644 (file)
index 9c61502..0000000
--- a/website/archive/binaries/mac/src/clustalw/src/general/Array2D.h
+++ /dev/null
@@ -1,141 +0,0 @@
-/**
- * Author: Mark Larkin
- * 
- * Copyright (c) 2007 Des Higgins, Julie Thompson and Toby Gibson.  
- */
-#ifndef ARRAY2D_H
-#define ARRAY2D_H
-
-#include<iostream>
-#include <vector>
-namespace clustalw
-{
-
-using namespace std;
-
-template <class T>
-class Array2D
-{
-public:
-   Array2D():m_dimRow(0), m_dimCol(0){;}
-   Array2D(int nRow, int nCol) 
-   {
-       m_dimRow = nRow;
-       m_dimCol = nCol;
-       for (int i=0; i < nRow; i++)
-       {
-           vector<T> x(nCol);
-           int y = x.size();
-           m_2DVector.push_back(x);
-       }
-   }
-   
-   int getRowSize()
-   {
-       return m_dimRow;
-   }
-   
-   int getColSize()
-   {
-       return m_dimCol;
-   }
-   
-   void SetAt(int nRow, int nCol, const T& value)
-   {
-       m_2DVector[nRow][nCol] = value;
-   }
-   T GetAt(int nRow, int nCol) 
-   {
-       return m_2DVector[nRow][nCol];
-   }
-   void GrowRow(int newSize) 
-   {
-       if (newSize <= (int)m_dimRow)
-           return;
-       m_dimRow = newSize;
-       for(int i = 0 ; i < newSize - (int)m_dimCol; i++)   
-       {
-           vector<T> x(m_dimRow);
-           m_2DVector.push_back(x);
-       }
-   }
-   void GrowCol(int newSize) 
-   {
-       if(newSize <= (int)m_dimCol)
-           return;
-       m_dimCol = newSize;
-       for (int i=0; i < (int)m_dimRow; i++)
-           m_2DVector[i].resize(newSize);
-   }
-   
-   void ResizeRect(int row, int col)
-   {
-       GrowRow(row);
-       GrowCol(col);
-   }
-
-   /* This is to get everything initialised to a value */
-   void GrowRow(int newSize, const T& value) 
-   {
-       if (newSize <= m_dimRow)
-           return;
-       m_dimRow = newSize;
-       for(int i = 0 ; i < newSize - m_dimCol; i++)   
-       {
-           vector<T> x(m_dimRow, value);
-           m_2DVector.push_back(x);
-       }
-   }
-   void GrowCol(int newSize, const T& value) 
-   {
-       if(newSize <= m_dimCol)
-           return;
-       m_dimCol = newSize;
-       for (int i=0; i <m_dimRow; i++)
-           m_2DVector[i].resize(newSize, value);
-   }
-   
-   void ResizeRect(int row, int col, const T& value)
-   {
-       GrowRow(row, value);
-       GrowCol(col, value);
-   }   
-      
-   void printArray()
-   {
-       for(int row=0; row < m_dimRow; row++)
-       {
-           for(int col=0; col < m_dimCol; col++)
-           {
-               cout <<" "<< m_2DVector[row][col];  
-           }
-           cout<<"\n";
-       }
-   }
-   
-   void clearArray()
-   {
-       int size = m_2DVector.size();
-       for(int i = 0; i < size; i++)
-       {
-           m_2DVector[i].clear();
-       }
-       m_2DVector.clear();
-       m_dimRow = 0;
-       m_dimCol = 0;
-       
-   }
-   
-   vector<T>& operator[](int x)    
-   {
-       return m_2DVector[x];
-   }
-private:
-   vector< vector <T> > m_2DVector;
-   unsigned int m_dimRow;
-   unsigned int m_dimCol;
-};
-
-}
-#endif
-