+++ /dev/null
-/**
- * Author: Mark Larkin
- *
- * Copyright (c) 2007 Des Higgins, Julie Thompson and Toby Gibson.
- */
-#ifndef PROFILESTANDARD_H
-#define PROFILESTANDARD_H
-
-#include "../alignment/Alignment.h"
-#include "ProfileBase.h"
-
-namespace clustalw
-{
-
-class ProfileStandard : public ProfileBase
-{
- public:
- /* Functions */
- ProfileStandard(int prfLen, int firstS, int lastS);
- void resetPrf2();
- void calcStandardProfile(SeqArray* alignment, vector<int>* seqWeight);
-
- /* Attributes */
-
- private:
- /* Functions */
-
- /* Attributes */
-};
-
-}
-#endif