+++ /dev/null
-DIsEMBL depends on BioPython and Tisean sav_gol executable
-both has to be installed
-DisEMBL.py script changes:
-move import sys statement up to append Bio python libraries path
-change path to python interpreter
-Comment out file argument read data from stdin instead
-was:
- file = str(sys.argv[7])
- db = open(file,'r')
-become:
-# file = str(sys.argv[7])
- db = sys.stdin
-
-Header
- print ' ____ _ _____ __ __ ____ _ _ _ _'
- print '| _ \(_)___| ____| \/ | __ )| | / || || |'
- print '| | | | / __| _| | |\/| | _ \| | | || || |_'
- print '| |_| | \__ \ |___| | | | |_) | |___ | ||__ _|'
- print '|____/|_|___/_____|_| |_|____/|_____| |_(_) |_|'
- print '# Copyright (C) 2004 - Rune Linding & Lars Juhl Jensen '
- print '# EMBL Biocomputing Unit - Heidelberg - Germany '
- print ''
-removed to facilitate parsing