Delete unneeded directory

[jabaws.git] / website / archive / binaries / mac / src / disembl / biopython-1.50 / Bio / cMarkovModelmodule.c

diff --git a/website/archive/binaries/mac/src/disembl/biopython-1.50/Bio/cMarkovModelmodule.c b/website/archive/binaries/mac/src/disembl/biopython-1.50/Bio/cMarkovModelmodule.c
deleted file mode 100644 (file)
index 8683113..0000000
--- a/website/archive/binaries/mac/src/disembl/biopython-1.50/Bio/cMarkovModelmodule.c
+++ /dev/null
@@ -1,61 +0,0 @@
-/* cMarkovModelmodule.c
- * jchang
- * Created: 1/13/01
- * Last modified: 11/26/02
- *
- * This optimizes some of the functions in MarkovModel.py.
- */
-
-#include "Python.h"
-#include "csupport.h"
-
-
-/* Functions in this module. */
-
-static char cMarkovModel__logadd__doc__[] = 
-"_logadd(logx, logy) -> log(x+y)\n";
-
-static PyObject *cMarkovModel__logadd(PyObject *self, PyObject *args)
-{
-    PyObject *py_logx, *py_logy;
-    double logx, logy, minxy;
-    double sum;
-
-    if(!PyArg_ParseTuple(args, "OO", &py_logx, &py_logy))
-       return NULL;
-    logx = PyNumber_AsDouble(py_logx);
-    logy = PyNumber_AsDouble(py_logy);
-    if(PyErr_Occurred())
-       return NULL;
-
-    if(logy-logx > 100.0) {
-       Py_INCREF(py_logy);
-       return py_logy;
-    } else if (logx-logy > 100.0) {
-       Py_INCREF(py_logx);
-       return py_logx;
-    }
-    minxy = (logx < logy) ? logx : logy;
-    sum = minxy + log(exp(logx-minxy) + exp(logy-minxy));
-    return PyFloat_FromDouble(sum);
-}
-       
-
-/* Module definition stuff */
-
-static PyMethodDef CMarkovModelMethods[] = {
-  {"_logadd", cMarkovModel__logadd, METH_VARARGS, cMarkovModel__logadd__doc__},
-  {NULL, NULL}
-};
-
-static char cMarkovModel__doc__[] =
-"This module provides optimized replacement functions for MarkovModel.\n\
-";
-
-void initcMarkovModel(void)
-{
-  Py_InitModule3("cMarkovModel", CMarkovModelMethods, cMarkovModel__doc__);
-}
-
-
-