Delete unneeded directory

[jabaws.git] / website / archive / binaries / mac / src / fasta34 / Makefile.freebsd

diff --git a/website/archive/binaries/mac/src/fasta34/Makefile.freebsd b/website/archive/binaries/mac/src/fasta34/Makefile.freebsd
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-#
-# Makefile for building fasta3 on FreeBSD
-#
-# Fernan Aguero - <fernan@iib.unsam.edu.ar>
-
-# we take care of doing variable assignment using the '?=' and '+='
-# operators to preserve the value of variables if they are already
-# defined. In FreeBSD this happens when fasta3 is build from the port or
-# when the user has set these variables -- most notably CC and/or CFLAGS
-# -- in /etc/make.conf
-
-# Compiler executable, and optional flags
-CC?=           gcc
-CFLAGS?=       -g -O2
-
-# your FASTA host
-FASTA_HOST?=   "your_fasta_host"
-
-# common CFLAGS. These are the set of CFLAGS that are always used
-COMMON_CFLAGS= -DSHOWSIM -DUNIX -DTIMES -DHZ=100 -c -DMAX_WORKERS=2 \
-               -DTHR_EXIT=pthread_exit -DPROGRESS -DUSE_MMAP -D_REENTRANT \
-               -D_LARGE_FILE_SOURCE -D_FILE_OFFSET_BITS=64 -DUSE_FSEEKO \
-               -DHAS_INTTYPES -DSAMP_STATS
-
-# standard options, these will be added to the common CFLAGS if
-# selected below
-STANDARD_CFLAGS=       -DSFCHAR="':'" -DFASTA_HOST='${FASTA_HOST}' \
-                       -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -DPGM_DOC
-
-# options for superfamily validations, these will be added to the common
-# CFLAGS if selected below
-SUPERFAMILY_CFLAGS=    -DSFCHAR="'|'" -DSUPERFAMNUM -DBIG_LIB64
-
-# here we define CFLAGS to be the sum of common flags plus a subset of
-# optional flags that define our intended use.
-# The default standard flags are selected by default, although the user
-# can override this if s/he wants
-CFLAGS+=       ${COMMON_CFLAGS} ${STANDARD_CFLAGS}
-
-XDIR?=         /usr/local/bin
-
-LIB_M+=                -lm
-
-HFLAGS+=       -o
-NFLAGS+=       -o
-
-# FreeBSD users BEWARE! Different threading models ahead!
-
-# The threading model has changed along the way from FreeBSD-4 to
-# FreeBSD-6. If you're building fasta3 on your own, you will need to
-# adjust this accordingly. The default works in FreeBSD-6x (currently
-# the recommended major version for use in production). Or better yet,
-# use the biology/fasta3 port from the ports collection, which will use
-# the correct threading library for your OSVERSION
-
-THR_SUBS?=     pthr_subs2
-THR_LIBS?=     -lpthread
-THR_CC?=       
-
-DROPNFA_O = drop_nfa.o
-DROPGSW_O = dropgsw.o
-DROPRSS_O = dropnsw.o
-DROPTFA_O = drop_tfa.o
-
-include Makefile34m.common