Delete unneeded directory

[jabaws.git] / website / archive / binaries / mac / src / fasta34 / Makefile.linux_mysql

diff --git a/website/archive/binaries/mac/src/fasta34/Makefile.linux_mysql b/website/archive/binaries/mac/src/fasta34/Makefile.linux_mysql
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-#
-# makefile for fasta3, fasta3_t.  Use makefile.pvm for pvcompxx.
-#
-# On the version of linux that I use, MININT is defined and causes a warning
-# as dropnfa.c is compiled.  Unfortunately, using the Linux definition of
-# MININT causes the code to break. Do not change the MININT definition
-# in dropnfa.c  (wrp 3/19/1998)
-#
-# for DEC/Compaq Alpha/LINUX, use gcc -mieee -g to avoid buggy compilers
-
-CC= gcc -g -O2
-
-#CC= gcc -g -DDEBUG
-#CC=/opt/parasoft/bin.linux2/insure -g -DDEBUG
-
-# this file works for x86 LINUX
-
-# standard options
-CFLAGS= -DSHOWSIM -DUNIX -DTIMES -DHZ=100 -DSFCHAR="':'" -c -DMAX_WORKERS=2 -DTHR_EXIT=pthread_exit -DPROGRESS -DFASTA_HOST='"your_fasta_host_here"' -DUSE_MMAP -D_REENTRANT -I/usr/include/mysql -DMYSQL_DB -D_FILE_OFFSET_BITS=64 -DUSE_FSEEKO -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -DHAS_INTTYPES -DSAMP_STATS -DPGM_DOC -DM10_CONS
-
-# use options below for superfamily validations
-#CFLAGS= -DSHOWSIM -DUNIX -DTIMES -DHZ=100 -DSFCHAR="'|'" -c -DMAX_WORKERS=2 -DTHR_EXIT=pthread_exit -DPROGRESS -DSUPERFAMNUM -DUSE_MMAP -D_REENTRANT
-
-# -I/usr/local/include/mysql -DMYSQL_DB 
-#
-#(for mySQL databases)  (also requires change to Makefile34.common)
-
-#LIB_M = -lm
-#LIB_M = -L/usr/lib/mysql -lmysqlclient -lm
-# for mySQL databases
-
-HFLAGS= -o
-NFLAGS= -o
-
-# for Linux
-THR_SUBS = pthr_subs2
-THR_LIBS = -lpthread
-THR_CC =
-
-XDIR = /seqprg/bin
-
-DROPNFA_O = drop_nfa.o
-DROPGSW_O = dropgsw.o
-DROPRSS_O = dropnsw.o
-DROPTFA_O = drop_tfa.o
-
-# renamed (fasta34)  programs
-include Makefile34m.common_mysql
-# conventional (fasta3) names
-# include Makefile.common