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[jabaws.git] / website / archive / binaries / mac / src / fasta34 / Makefile.pLinux_sql

diff --git a/website/archive/binaries/mac/src/fasta34/Makefile.pLinux_sql b/website/archive/binaries/mac/src/fasta34/Makefile.pLinux_sql
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-# $Name: fa_34_26_5 $ - $Id: Makefile.pLinux_sql,v 1.4 2004/11/19 15:28:26 wrp Exp $
-#
-# makefile for fasta3, fasta3_t.  Use makefile.pvm for pvcompxx.
-# this file works for DEC Alphas
-#
-# this file supports mmap()'ed databases in BLAST2 format use -DUSE_MMAP
-# for mmap()ed BLAST2 format.
-
-# the -DDEBUG option provides additional debugging information, particularly
-# with -D on the command line.
-
-# use -DBIG_LIB64 to generate and use 64-bit offsets in map_db .xin
-# files
-
-# for Tru64 4.0F, no "<inttypes.h>" 4.0G has inttypes.h
-
-CC= xlc_r
-
-#CC= cc -g3 -O -std1
-#CC= insure -g -DDEBUG
-#CC= cc -g -DDEBUG -std1
-
-#CC= gcc -g -Wall
-#
-
-CFLAGS= -O3 -qtune=auto -qarch=auto -DUNIX -DTIMES -DBIGMEM -DMAX_WORKERS=4 -DSFCHAR="':'" -DTHR_EXIT=pthread_exit -DPROGRESS -DUSE_MMAP -DIS_BIG_ENDIAN -DSAMP_STATS -DPGM_DOC -D_LARGE_FILES -DHAS_INTTYPES -D__pLinux__ -DFASTA_HOST='"fasta.bioch.virginia.edu/fasta/cgi"' -I/usr/include/mysql -DMYSQL_DB   
-#
-#(-DMYSQL_DB for mySQL databases)  (also requires change to Makefile34.common)
-
-# special options for SUPERFAMLIES
-#CFLAGS= -DM10_CONS -DUNIX -DTIMES -DHZ=60 -DBIGMEM -DSFCHAR="'|'" -DMAX_WORKERS=4 -DTHR_EXIT=pthread_exit -DPROGRESS -DSUPERFAMNUM -DIS_LITTLE_ENDIAN -DUSE_MMAP -DMAXBEST=200000
- 
-#LIB_M = -lm
-LIB_M = -L/usr/local/lib/mysql -lmysqlclient -lm
-# for mySQL databases
-
-HFLAGS= -o
-NFLAGS= -o
-
-#for DEC Unix V4.0 
-#THR_SUBS = pthr_subs2
-#THR_LIBS = -threads
-#THR_CC =
-
-#for Sun
-#THR_SUBS = uthr_subs
-#THR_LIBS = -lthread
-#THR_CC =
-#
-# for SGI with current pthreads
-#THR_SUBS = pthr_subs
-#THR_LIBS = -lpthreads
-#THR_CC = 
-#
-# for IBM with current pthreads
-#CC= xlc_r -v -g
-#THR_SUBS = ibm_pthr_subs
-#THR_LIBS = -lpthreads
-#THR_CC =
-
-# for IBM Linux with current pthreads
-THR_SUBS = pthr_subs2
-THR_LIBS = -lpthread
-
-XDIR = /seqprg/slib/bin
-
-DROPNFA_O = drop_nfa.o
-DROPGSW_O = dropgsw.o
-DROPRSS_O = dropnsw.o
-DROPTFA_O = drop_tfa.o
-
-# renamed (fasta34)  programs
-include Makefile34m.common_sql
-