+++ /dev/null
-
-#ifndef A_STRUCT
-#define A_STRUCT
-
-struct a_struct {
- int smin0; /* coordinate of display start in seqc0 */
- int smin1; /* coordinate of display start in seqc1 */
- int amin0, amax0; /* coordinate of alignment start in seqc0 */
- int amin1, amax1; /* coordinate of alignment start in seqc1 */
-
- int llen;
- int llcntx, llcntx_flg, showall;
-
- int qlrev, qlfact;
- int llrev, llfact, llmult;
- int frame;
-
- int a_len; /* consensus alignment length */
- int nident, nsim, ngap_q, ngap_l, nfs; /* number of identities, gaps in q, l */
- long d_start0,d_stop0;
- long d_start1,d_stop1;
-};
-
-struct a_res_str {
- int min0, max0; /* boundaries of alignment in aa0 */
- int min1, max1; /* boundaries of alignment in aa1 */
- int *res;
- int nres;
-};
-#endif