+++ /dev/null
-/* Concurrent read version */
-
-/* $Name: fa_34_26_5 $ - $Id: mw.h,v 1.20 2006/03/20 17:38:15 wrp Exp $ */
-
-#include <sys/types.h>
-
-#include "aln_structs.h"
-
-#ifndef FSEEK_T_DEF
-#ifndef USE_FSEEKO
-typedef long fseek_t;
-#else
-typedef off_t fseek_t;
-#endif
-#endif
-
-struct beststr {
- int n1; /* sequence length */
- int *n1tot_p; /* pointer (or NULL) to long sequence length */
- int score[3]; /* score */
- int sw_score; /* do_walign() score */
- double comp;
- double H;
- double zscore;
- double escore;
- int segnum;
- int seglen;
- struct lmf_str *m_file_p;
- fseek_t lseek;
- char libstr[MAX_UID];
- int cont;
- int frame;
- int nsfnum;
- int sfnum[10];
- long loffset;
- struct a_struct aln_d; /* these values are used by -m9 */
- struct a_res_str a_res; /* need only a_res, not a_res[2], because different frames
- for the same sequence are stored separately */
- int have_ares;
- float percent, gpercent;
-};
-
-struct stat_str {
- int score;
- int n1;
- double comp;
- double H;
- double escore;
- int segnum;
- int seglen;
-};
-
-