+++ /dev/null
-/* Concurrent read version */
-
-/* $Name: fa_34_26_5 $ - $Id: p_mw.h,v 1.17 2006/04/12 18:00:02 wrp Exp $ */
-
-#ifndef FSEEK_T_DEF
-#ifndef USE_FSEEKO
-typedef long fseek_t;
-#else
-typedef off_t fseek_t;
-#endif
-#endif
-
-struct beststr {
- int n1; /* sequence number */
- int score[3]; /* score */
- int rscore; /* score from shuffled sequence */
- int sw_score; /* optimal score from alignment */
- double comp; /* karlin 1/lambda comp.parameter */
- double H; /* karlin H information content */
- double zscore;
- double escore;
- double r_escore;
- int segnum;
- int seglen;
- int lib;
- fseek_t lseek;
- int cont;
- int frame;
- int m_seqnm;
- int seqnm;
- int wrkr;
- struct sql *desptr;
- struct a_struct *aln_d;
- char *aln_code;
- int aln_code_n;
- float percent, gpercent;
-};
-
-struct stat_str {
- int score;
- int n1;
- double comp;
- double H;
- double escore;
- int segnum;
- int seglen;
-};
-
-/* this structure passes library sequences to the worker threads
- and returns scores */
-
-#include "w_mw.h"
-
-/*
-struct pbuf_head {
- int buf_cnt;
- unsigned char *start;
- struct sqs2 *buf;
-};
-*/