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[jabaws.git] / website / archive / binaries / mac / src / fasta34 / readme.pvm_3.2

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---> August, 1999
-
-Corrected problem with opt_cut initialization that only appeared
-with p?compfa programs.
-
---> v3.26      July, 1999
-
-pvcomp* programs now use the same method for working with forward and
-reverse strands as the standard fast*3(_t) programs.  Thus, statistics
-for DNA sequences should be very similar for pvcompfa and fasta3 or
-fasta3_t.
-
-               February, 1999
-
-With release fasta32t02 of the FASTA package, the alignment
-routines for pvcompfa, pvcompsw, etc now work properly
-again.
-
-The PVM versions of the FASTA and Smith-Waterman search programs
-should now be functionally identical to the multithreaded (fasta3_t,
-ssearch3_t) and non-threaded (fasta3, ssearch3) versions.
-
-The programs have also been updated to provide similar -m 10
-information to the non-pvm versions.  There are some slight
-differences, because the pvcomp* versions are designed to work with
-multiple sequences.  But, in general, a script that looks for /^>>>/
-to start an alignment set and /^>>><<</ to end the set work work
-properly.
-
---> v3.23      March, 1999 
-
-Modified Makefile.pvm, showsum.c so that showsum.c is used by
-both the complib/_thr and pvcomplib (pvm parallel) versions.
-
-Corrected bug in reading first query for DNA sequences.
-
---> v3.25      May, 1999
-
-Fixed pvm_showalign.c so that FIRSTNODE (in msg.h) can be 1, rather
-than 0.  #define FIRSTNODE 1 is recommended when the virtual machine
-has 8 or more nodes.
-