Mac binaries

[jabaws.git] / website / archive / binaries / mac / src / fasta34 / test_z.sh

diff --git a/website/archive/binaries/mac/src/fasta34/test_z.sh b/website/archive/binaries/mac/src/fasta34/test_z.sh
new file mode 100644 (file)
index 0000000..d150b9a
--- /dev/null
+++ b/website/archive/binaries/mac/src/fasta34/test_z.sh
@@ -0,0 +1,33 @@
+#!/bin/csh -f
+echo "starting fasta34_t - protein" `date`
+foreach z ( 1 2 3 6 11 )
+fasta34_t -q  -z $z mgstm1.aa a > test_m1_a.ok2_t_${z}
+fasta34_t -q  -z $z oohu.aa a > test_m1_b.ok2_t_${z}
+fasta34_t -q -S -z $z prio_atepa.aa a > test_m1_c.ok2S_t_${z}
+fasta34_t -q -S -z $z h10_human.aa a > test_m1_d.ok2S_t_${z}
+end
+echo "done"
+echo "starting ssearch34_t" `date`
+foreach z ( 1 2 3 6 11 )
+ssearch34_t -q  -z $z mgstm1.aa a > test_m1_a.ssS_t_${z}
+ssearch34_t -q  -z $z oohu.aa a > test_m1_b.ssS_t_${z}
+ssearch34_t -q -sBL62 -S -f -11 -z $z prio_atepa.aa a > test_m1_c.ssSbl62_t_${z}
+ssearch34_t -q -sBL62 -S -f -11 -z $z h10_human.aa a > test_m1_d.ssSbl62_t_${z}
+end
+echo "done"
+echo "starting fasta34 - protein" `date`
+foreach z ( 1 2 3 6 11 )
+fasta34 -q  -z $z mgstm1.aa a > test_m1_a.ok2_${z}
+fasta34 -q  -z $z oohu.aa a > test_m1_b.ok2_${z}
+fasta34 -q -S -sBL62 -f -11 -z $z prio_atepa.aa a > test_m1_c.ok2Sbl62_${z}
+fasta34 -q -S -sBL62 -f -11 -z $z h10_human.aa a > test_m1_d.ok2Sbl62_${z}
+end
+echo "done"
+echo "starting ssearch3" `date`
+foreach z ( 1 2 3 6 11 )
+ssearch34 -q  -z $z mgstm1.aa a > test_m1_a.ssS_${z}
+ssearch34 -q  -z $z oohu.aa a > test_m1_b.ssS_${z}
+ssearch34 -q -S -z $z prio_atepa.aa a > test_m1_c.ssS_${z}
+ssearch34 -q -S -z $z h10_human.aa a > test_m1_d.ssS_${z}
+end
+echo "done" `date`