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[jabaws.git] / website / archive / binaries / mac / src / fasta34 / vtml160.mat

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-#
-#     VTML160
-#
-# This matrix was produced with scripts written by
-# Tobias Mueller and Sven Rahmann [June-2001]. 
-#
-# VTML160 substitution matrix, Units = Third-Bits
-# Expected Score = -1.297840 Third-Bits
-# Lowest Score = -7, Highest Score = 16
-#
-# Entropy H = 0.562489 Bits
-#
-# 30-Jun-2001 
-    A   R   N   D   C   Q   E   G   H   I   L   K   M   F   P   S   T   W   Y   V   B   Z   X   * 
-A   5  -2  -1  -1   1  -1  -1   0  -2  -1  -2  -1  -1  -3   0   1   1  -5  -3   0  -1  -1   0  -7 
-R  -2   7   0  -3  -3   2  -1  -3   1  -4  -3   4  -2  -5  -2  -1  -1  -4  -3  -4  -2   0   0  -7 
-N  -1   0   7   3  -3   0   0   0   1  -4  -4   0  -3  -5  -2   1   0  -5  -2  -4   5   0   0  -7 
-D  -1  -3   3   7  -5   1   3  -1   0  -6  -6   0  -5  -7  -1   0  -1  -7  -5  -4   6   3   0  -7 
-C   1  -3  -3  -5  13  -4  -5  -2  -2  -1  -4  -4  -1  -4  -3   1   0  -7  -1   1  -4  -5   0  -7 
-Q  -1   2   0   1  -4   6   2  -3   2  -4  -2   2  -1  -4  -1   0  -1  -6  -4  -3   0   4   0  -7 
-E  -1  -1   0   3  -5   2   6  -2  -1  -5  -4   1  -3  -6  -1   0  -1  -7  -3  -3   2   5   0  -7 
-G   0  -3   0  -1  -2  -3  -2   8  -3  -7  -6  -2  -5  -6  -3   0  -2  -5  -5  -5  -1  -2   0  -7 
-H  -2   1   1   0  -2   2  -1  -3   9  -4  -3   0  -3   0  -2  -1  -1  -1   3  -3   0   0   0  -7 
-I  -1  -4  -4  -6  -1  -4  -5  -7  -4   6   3  -4   2   0  -4  -3  -1  -2  -2   4  -5  -4   0  -7 
-L  -2  -3  -4  -6  -4  -2  -4  -6  -3   3   6  -3   4   2  -3  -3  -2  -1  -1   2  -5  -3   0  -7 
-K  -1   4   0   0  -4   2   1  -2   0  -4  -3   5  -2  -5  -1  -1  -1  -5  -3  -3   0   2   0  -7 
-M  -1  -2  -3  -5  -1  -1  -3  -5  -3   2   4  -2   8   1  -4  -3  -1  -4  -2   1  -4  -3   0  -7 
-F  -3  -5  -5  -7  -4  -4  -6  -6   0   0   2  -5   1   9  -5  -3  -3   3   6  -1  -6  -5   0  -7 
-P   0  -2  -2  -1  -3  -1  -1  -3  -2  -4  -3  -1  -4  -5   9   0  -1  -5  -6  -3  -2  -1   0  -7 
-S   1  -1   1   0   1   0   0   0  -1  -3  -3  -1  -3  -3   0   4   2  -4  -2  -2   1   0   0  -7 
-T   1  -1   0  -1   0  -1  -1  -2  -1  -1  -2  -1  -1  -3  -1   2   5  -6  -3   0   0  -1   0  -7 
-W  -5  -4  -5  -7  -7  -6  -7  -5  -1  -2  -1  -5  -4   3  -5  -4  -6  16   4  -5  -6  -7   0  -7 
-Y  -3  -3  -2  -5  -1  -4  -3  -5   3  -2  -1  -3  -2   6  -6  -2  -3   4  10  -3  -3  -4   0  -7 
-V   0  -4  -4  -4   1  -3  -3  -5  -3   4   2  -3   1  -1  -3  -2   0  -5  -3   5  -4  -3   0  -7 
-B  -1  -2   5   6  -4   0   2  -1   0  -5  -5   0  -4  -6  -2   1   0  -6  -3  -4   5   2   0  -7 
-Z  -1   0   0   3  -5   4   5  -2   0  -4  -3   2  -3  -5  -1   0  -1  -7  -4  -3   2   5   0  -7 
-X   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  -7 
-*  -7  -7  -7  -7  -7  -7  -7  -7  -7  -7  -7  -7  -7  -7  -7  -7  -7  -7  -7  -7  -7  -7  -7   1