Delete unneeded directory

[jabaws.git] / website / archive / binaries / mac / src / mafft / core / seq2regtable.c

diff --git a/website/archive/binaries/mac/src/mafft/core/seq2regtable.c b/website/archive/binaries/mac/src/mafft/core/seq2regtable.c
deleted file mode 100644 (file)
index 58b9cc8..0000000
--- a/website/archive/binaries/mac/src/mafft/core/seq2regtable.c
+++ /dev/null
@@ -1,88 +0,0 @@
-#include "mltaln.h"
-
-#define DEBUG 0
-
-char *weboutfile = NULL;
-
-
-void arguments( int argc, char *argv[] )
-{
-    int c;
-
-    while( --argc > 0 && (*++argv)[0] == '-' )
-       {
-        while ( (c = *++argv[0]) )
-               {
-            switch( c )
-            {
-                               case 'i':
-                                       inputfile = *++argv;
-                                       fprintf( stderr, "inputfile = %s\n", inputfile );
-                                       --argc;
-                                       goto nextoption;
-                               case 'w':
-                                       weboutfile = *++argv;
-                                       fprintf( stderr, "weboutfile = %s\n", weboutfile );
-                                       --argc;
-                                       goto nextoption;
-                default:
-                    fprintf( stderr, "illegal option %c\n", c );
-                    argc = 0;
-                    break;
-            }
-               }
-               nextoption:
-                       ;
-       }
-    if( argc != 0 ) 
-    {
-        fprintf( stderr, "options: Check source file !\n" );
-        exit( 1 );
-    }
-}
-
-
-int main( int argc, char *argv[] )
-{
-       FILE *infp;
-       FILE *weboutfp;
-       int nlenmin;
-       int isaligned = 0;
-
-       arguments( argc, argv );
-
-       if( inputfile )
-       {
-               infp = fopen( inputfile, "r" );
-               if( !infp )
-               {
-                       fprintf( stderr, "Cannot open %s\n", inputfile );
-                       exit( 1 );
-               }
-       }
-       else
-               infp = stdin;
-
-       if( weboutfile )
-       {
-               weboutfp = fopen( weboutfile, "w" );
-               if( !weboutfp )
-               {
-                       fprintf( stderr, "Cannot open %s\n", weboutfile );
-                       exit( 1 );
-               }
-       }
-
-       dorp = NOTSPECIFIED;
-       if( weboutfile )
-       {
-               getnumlen_nogap_outallreg_web( infp, weboutfp, &nlenmin, &isaligned );
-               if( isaligned ) fprintf( stdout, "Aligned\n" );
-               else fprintf( stdout, "Not aligned\n" );
-       }
-       else
-               getnumlen_nogap_outallreg( infp, &nlenmin );
-
-       return( 0 );
-
-}