Mac binaries
[jabaws.git] / website / archive / binaries / mac / src / mafft / test / sample.dpparttree
diff --git a/website/archive/binaries/mac/src/mafft/test/sample.dpparttree b/website/archive/binaries/mac/src/mafft/test/sample.dpparttree
new file mode 100644 (file)
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--- /dev/null
@@ -0,0 +1,576 @@
+>     1== M63632   1 Lampetra japonica rhodopsin <>[BBRC174,1125-1132'91]
+M-----------------------------------------------------------
+-----------------------------------NGTE--GDNFYVPF-----------
+---------------------------------------------SNKTGLARSPYEYPQ
+Y-YLAEPW------------K--------------------------------YSALAAY
+MFFLILVGFPVNFLTLFVTVQHKKLRTPLNYILLNLAMANLFMVLFG-FTVTMYTS-MN-
+GYFV--FGPTMCSIEGFFATLGGEVALWSLVVLAIERYIVICKPMGN-FRFGNTHAIMGV
+AFTWIMALAC-AAPPLVG-WSRYIP-------EGM----QCSCGPDYYTLNPNFNNESYV
+VYMFVVHFLVPFVIIFFCYGRLLCTV----KE----------------------------
+------------------------------------------------------------
+----------------------------------------------AAAAQQE-------
+------------------------------SASTQKAEKEVTRMVVLMVIGFLVCWVPYA
+SVAFYIFT-HQG-S--DFGATFMTLPAFFAKSSALYNPVIYILMNKQFRNCMITTLC-C-
+--GKNP-------------------LGDDE--SGASTSKT-E--VSSVS-TSPV------
+------------------------------------------------------------
+-------------------SP-A---
+>     2== U22180   1 rat opsin <rod>[J.Mol.Neurosci.5(3),207-209'94]
+M-----------------------------------------------------------
+-----------------------------------NGTE--GPNFYVPF-----------
+---------------------------------------------SNITGVVRSPFEQPQ
+Y-YLAEPW------------Q--------------------------------FSMLAAY
+MFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGG-FTTTLYTS-LH-
+GYFV--FGPTGCNLEGFFATLGGEIGLWSLVVLAIERYVVVCKPMSN-FRFGENHAIMGV
+AFTWVMALAC-AAPPLVG-WSRYIP-------EGM----QCSCGIDYYTLKPEVNNESFV
+IYMFVVHFTIPMIVIFFCYGQLVFTV----KE----------------------------
+------------------------------------------------------------
+----------------------------------------------AAAQQQE-------
+------------------------------SATTQKAEKEVTRMVIIMVIFFLICWLPYA
+SVAMYIFT-HQG-S--NFGPIFMTLPAFFAKTASIYNPIIYIMMNKQFRNCMLTSLC-C-
+--GKNP-------------------LGDDE--ASATASKT-E--------TSQV------
+------------------------------------------------------------
+-------------------AP-A---
+>     3== M92038   1 chicken green sensitive cone opsin <retina>[PNAS89,5932-5936'9
+M-----------------------------------------------------------
+-----------------------------------NGTE--GINFYVPM-----------
+---------------------------------------------SNKTGVVRSPFEYPQ
+Y-YLAEPW------------K--------------------------------YRLVCCY
+IFFLISTGLPINLLTLLVTFKHKKLRQPLNYILVNLAVADLFMACFG-FTVTFYTA-WN-
+GYFV--FGPVGCAVEGFFATLGGQVALWSLVVLAIERYIVVCKPMGN-FRFSATHAMMGI
+AFTWVMAFSC-AAPPLFG-WSRYMP-------EGM----QCSCGPDYYTHNPDYHNESYV
+LYMFVIHFIIPVVVIFFSYGRLICKV----RE----------------------------
+------------------------------------------------------------
+----------------------------------------------AAAQQQE-------
+------------------------------SATTQKAEKEVTRMVILMVLGFMLAWTPYA
+VVAFWIFT-NKG-A--DFTATLMAVPAFFSKSSSLYNPIIYVLMNKQFRNCMITTIC-C-
+--GKNP-------------------FGDEDVSSTVSQSKT-E--VSSVS-SSQV------
+------------------------------------------------------------
+-------------------SP-A---
+>     4=p A45229 opsin, green-sensitive (clone GFgr-1) - goldfish
+M-----------------------------------------------------------
+-----------------------------------NGTE--GKNFYVPM-----------
+---------------------------------------------SNRTGLVRSPFEYPQ
+Y-YLAEPW------------Q--------------------------------FKILALY
+LFFLMSMGLPINGLTLVVTAQHKKLRQPLNFILVNLAVAGTIMVCFG-FTVTFYTA-IN-
+GYFV--LGPTGCAVEGFMATLGGEVALWSLVVLAIERYIVVCKPMGS-FKFSSSHAFAGI
+AFTWVMALAC-AAPPLFG-WSRYIP-------EGM----QCSCGPDYYTLNPDYNNESYV
+IYMFVCHFILPVAVIFFTYGRLVCTV----KA----------------------------
+------------------------------------------------------------
+----------------------------------------------AAAQQQD-------
+------------------------------SASTQKAEREVTKMVILMVFGFLIAWTPYA
+TVAAWIFF-NKG-A--DFSAKFMAIPAFFSKSSALYNPVIYVLLNKQFRNCMLTTIF-C-
+--GKNP-------------------LGDDE-SSTVSTSKT-E--VSS------V------
+------------------------------------------------------------
+-------------------SP-A---
+>     5=p B45229 opsin, green-sensitive (clone GFgr-2) - goldfish
+M-----------------------------------------------------------
+-----------------------------------NGTE--GNNFYVPL-----------
+---------------------------------------------SNRTGLVRSPFEYPQ
+Y-YLAEPW------------Q--------------------------------FKLLAVY
+MFFLICLGLPINGLTLICTAQHKKLRQPLNFILVNLAVAGAIMVCFG-FTVTFYTA-IN-
+GYFA--LGPTGCAVEGFMATLGGEVALWSLVVLAIERYIVVCKPMGS-FKFSSTHASAGI
+AFTWVMAMAC-AAPPLVG-WSRYIP-------EGI----QCSCGPDYYTLNPEYNNESYV
+LYMFICHFILPVTIIFFTYGRLVCTV----KA----------------------------
+------------------------------------------------------------
+----------------------------------------------AAAQQQD-------
+------------------------------SASTQKAEREVTKMVILMVLGFLVAWTPYA
+TVAAWIFF-NKG-A--AFSAQFMAIPAFFSKTSALYNPVIYVLLNKQFRSCMLTTLF-C-
+--GKNP-------------------LGDEE-SSTVSTSKT-E--VSS------V------
+------------------------------------------------------------
+-------------------SP-A---
+>     6== L11864   1 Carassius auratus blue cone opsin <retina>[Biochemistry32,208-
+M-----------------------------------------------------------
+-----------------------------------KQVPEFHEDFYIPIPL---------
+-------------------------------------------DINNLS--AYSPFLVPQ
+D-HLGNQG------------I--------------------------------FMAMSVF
+MFFIFIGGASINILTILCTIQFKKLRSHLNYILVNLSIANLFVAIFG-SPLSFYSF-FN-
+RYFI--FGATACKIEGFLATLGGMVGLWSLAVVAFERWLVICKPLGN-FTFKTPHAIAGC
+ILPWISALAA-SLPPLFG-WSRYIP-------EGL----QCSCGPDWYTTNNKYNNESYV
+MFLFCFCFAVPFGTIVFCYGQLLITL----KL----------------------------
+------------------------------------------------------------
+----------------------------------------------AAKAQAD-------
+------------------------------SASTQKAEREVTKMVVVMVLGFLVCWAPYA
+SFSLWIVS-HRG-E--EFDLRMATIPSCLSKASTVYNPVIYVLMNKQFRSCMM-KMV-C-
+--GKN--------------------IEEDE--ASTSSQVT-Q--VSS------V------
+------------------------------------------------------------
+-------------------APEK---
+>     7== M13299   1 human BCP <>[Science232(4747),193-202'86]
+M-----------------------------------------------------------
+-----------------------------------RKMS--EEEFYL---F---------
+---------------------------------------------KNISSV--GPWDGPQ
+Y-HIAPVW------------A--------------------------------FYLQAAF
+MGTVFLIGFPLNAMVLVATLRYKKLRQPLNYILVNVSFGGFLLCIFS-VFPVFVAS-CN-
+GYFV--FGRHVCALEGFLGTVAGLVTGWSLAFLAFERYIVICKPFGN-FRFSSKHALTVV
+LATWTIGIGV-SIPPFFG-WSRFIP-------EGL----QCSCGPDWYTVGTKYRSESYT
+WFLFIFCFIVPLSLICFSYTQLLRAL----KA----------------------------
+------------------------------------------------------------
+----------------------------------------------VAAQQQE-------
+------------------------------SATTQKAEREVSRMVVVMVGSFCVCYVPYA
+AFAMYMVN-NRN-H--GLDLRLVTIPSFFSKSACIYNPIIYCFMNKQFQACIM-KMV-C-
+--GKA--------------------MTDES--DTCSSQKT-E--VSTVS-STQV------
+------------------------------------------------------------
+-------------------GP-N---
+>     8=opsin, greensensitive  human (fragment) S07060
+------------------------------------------------------------
+------------------------------------------------------------
+------------------------------------------------------------
+------------------------------------------------------------
+---------------------------------------DLAETVIA-STISIVNQ-VS-
+GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGN-VRFDAKLAIVGI
+AFSWIWAAVW-TAPPIFG-WSRYWP-------HGL----KTSCGPDVFSGSSYPGVQSYM
+IVLMVTCCITPLSIIVLCYLQVWLAI----RA----------------------------
+------------------------------------------------------------
+----------------------------------------------VAKQQKE-------
+------------------------------SESTQKAEKEVTRMVVVMVLAFC-------
+------------------------------------------------------------
+------------------------------------------------------------
+------------------------------------------------------------
+--------------------------
+>     9== K03494   1 human GCP <>[Science232(4747),193-202'86]
+M--------------AQQWSLQRLAGRHPQDSYE--------------------------
+-----------------------------------DSTQ--SSIFTYTN-----------
+---------------------------------------------SNST---RGPFEGPN
+Y-HIAPRW------------V--------------------------------YHLTSVW
+MIFVVIASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIA-STISVVNQ-VY-
+GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWMVVCKPFGN-VRFDAKLAIVGI
+AFSWIWAAVW-TAPPIFG-WSRYWP-------HGL----KTSCGPDVFSGSSYPGVQSYM
+IVLMVTCCITPLSIIVLCYLQVWLAI----RA----------------------------
+------------------------------------------------------------
+----------------------------------------------VAKQQKE-------
+------------------------------SESTQKAEKEVTRMVVVMVLAFCFCWGPYA
+FFACFAAA-NPG-Y--PFHPLMAALPAFFAKSATIYNPVIYVFMNRQFRNCIL-QLF---
+--GKK--------------------VDDGS--ELSSASKT-E--VSSV---SSV------
+------------------------------------------------------------
+-------------------SP-A---
+>    10== Z68193   1 human Red Opsin <>[]
+M--------------AQQWSLQRLAGRHPQDSYE--------------------------
+-----------------------------------DSTQ--SSIFTYTN-----------
+---------------------------------------------SNST---RGPFEGPN
+Y-HIAPRW------------V--------------------------------YHLTSVW
+MIFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIA-STISIVNQ-VS-
+GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGN-VRFDAKLAIVGI
+AFSWIWSAVW-TAPPIFG-WSRYWP-------HGL----KTSCGPDVFSGSSYPGVQSYM
+IVLMVTCCIIPLAIIMLCYLQVWLAI----RA----------------------------
+------------------------------------------------------------
+----------------------------------------------VAKQQKE-------
+------------------------------SESTQKAEKEVTRMVVVMIFAYCVCWGPYT
+FFACFAAA-NPG-Y--AFHPLMAALPAYFAKSATIYNPVIYVFMNRQFRNCIL-QLF---
+--GKK--------------------VDDGS--ELSSASKT-E--VSSV---SSV------
+------------------------------------------------------------
+-------------------SP-A---
+>    11== M92036   1 Gecko gecko P521 <retina>[PNAS89,6841-6845'92]
+M--------------TEAWNVAVFAARRSRDD-D--------------------------
+-----------------------------------DTTR--GSVFTYTN-----------
+---------------------------------------------TNNT---RGPFEGPN
+Y-HIAPRW------------V--------------------------------YNLVSFF
+MIIVVIASCFTNGLVLVATAKFKKLRHPLNWILVNLAFVDLVETLVA-STISVFNQ-IF-
+GYFI--LGHPLCVIEGYVVSSCGITGLWSLAIISWERWFVVCKPFGN-IKFDSKLAIIGI
+VFSWVWAWGW-SAPPIFG-WSRYWP-------HGL----KTSCGPDVFSGSVELGCQSFM
+LTLMITCCFLPLFIIIVCYLQVWMAI----RA----------------------------
+------------------------------------------------------------
+----------------------------------------------VAAQQKE-------
+------------------------------SESTQKAEREVSRMVVVMIVAFCICWGPYA
+SFVSFAAA-NPG-Y--AFHPLAAALPAYFAKSATIYNPVIYVFMNRQFRNCIM-QLF---
+--GKK--------------------VDDGS--EASTTSRT-E--VSSVS-NSSV------
+------------------------------------------------------------
+-------------------AP-A---
+>    12== M62903   1 chicken visual pigment <>[BBRC173,1212-1217'90]
+M--------------AA-WEAAFAARRRHEE--E--------------------------
+-----------------------------------DTTR--DSVFTYTN-----------
+---------------------------------------------SNNT---RGPFEGPN
+Y-HIAPRW------------V--------------------------------YNLTSVW
+MIFVVAASVFTNGLVLVATWKFKKLRHPLNWILVNLAVADLGETVIA-STISVINQ-IS-
+GYFI--LGHPMCVVEGYTVSACGITALWSLAIISWERWFVVCKPFGN-IKFDGKLAVAGI
+LFSWLWSCAW-TAPPIFG-WSRYWP-------HGL----KTSCGPDVFSGSSDPGVQSYM
+VVLMVTCCFFPLAIIILCYLQVWLAI----RA----------------------------
+------------------------------------------------------------
+----------------------------------------------VAAQQKE-------
+------------------------------SESTQKAEKEVSRMVVVMIVAYCFCWGPYT
+FFACFAAA-NPG-Y--AFHPLAAALPAYFAKSATIYNPIIYVFMNRQFRNCIL-QLF---
+--GKK--------------------VDDGS--EVST-SRT-E--VSSVS-NSSV------
+------------------------------------------------------------
+-------------------SP-A---
+>    13== S75720   1 chicken P-opsin <>[Science267(5203),1502-1506'95]
+M--------------S-----------------S--------------------------
+-----------------------------------NSSQ--AP-----------------
+---------------------------------------------PNGT---PGPFDGPQ
+WPYQAPQS------------T--------------------------------YVGVAVL
+MGTVVACASVVNGLVIVVSICYKKLRSPLNYILVNLAVADLLVTLCG-SSVSLSNN-IN-
+GFFV--FGRRMCELEGFMVSLTGIVGLWSLAILALERYVVVCKPLGD-FQFQRRHAVSGC
+AFTWGWALLW-SAPPLLG-WSSYVP-------EGL----RTSCGPNWYTGGSNN--NSYI
+LSLFVTCFVLPLSLILFSYTNLLLTL----RA----------------------------
+------------------------------------------------------------
+----------------------------------------------AAAQQKE-------
+------------------------------ADTTQRAEREVTRMVIVMVMAFLLCWLPYS
+TFALVVAT-HKG-I--IIQPVLASLPSYFSKTATVYNPIIYVFMNKQFQSCLL-EMLCCG
+YQPQR--------------------TGKAS--PGTPGPHA-D--VTAAGLRNKV------
+------------------------------------------------------------
+-------------------MP-AHPV
+>    14== M17718   1 D.melanogaster Rh3 <>[J.Neurosci.7,1550-1557'87]
+M--------------------------------ES-G-----------------------
+-----------------------------------NVSS-----------SLFGNVSTAL
+RPEA------------------RLSA---ETRLLGWNVPPEELR----------------
+--HIPEHW------------LT---------YPEPPESM--------------NYLLGTL
+YIFFTLMSMLGNGLVIWVFSAAKSLRTPSNILVINLAFCDFMMMVK--TPIFIYNS-FH-
+QGYA--LGHLGCQIFGIIGSYTGIAAGATNAFIAYDRFNVITRPMEG--KMTHGKAIAMI
+IFIYMYATPW-VVACYTETWGRFVP-------EGY----LTSCTFDYLT--DNFDTRLFV
+ACIFFFSFVCPTTMITYYYSQIVGHVFSHEKA----------------------------
+------------------------------------------------------------
+----------------------------------------------LRDQAKK--MNVES
+L------------------------RS-NVDKNKETAEIRIAKAAITICFLFFCSWTPYG
+VMSLIGAF-GDK-T--LLTPGATMIPACACKMVACIDPFVYAISHPRYRMELQ-------
+--KRCP----WLALNE---KAPE--SSAVA--STSTTQEP-Q------------------
+-------QT---------------------------------------------------
+-------------------TA-A---
+>    15== X65879   1 Drosophila pseudoobscura Dpse\Rh3 <>[Genetics132(1),193-204'92
+M--------------------------------EY-H-----------------------
+-----------------------------------NVSS-----------VL-GNVSSVL
+RPDA------------------RLSA---ESRLLGWNVPPDELR----------------
+--HIPEHW------------LI---------YPEPPESM--------------NYLLGTL
+YIFFTVISMIGNGLVMWVFSAAKSLRTPSNILVINLAFCDFMMMIK--TPIFIYNS-FH-
+QGYA--LGHLGCQIFGVIGSYTGIAAGATNAFIAYDRYNVITRPMEG--KMTHGKAIAMI
+IFIYLYATPW-VVACYTESWGRFVP-------EGY----LTSCTFDYLT--DNFDTRLFV
+ACIFFFSFVCPTTMITYYYSQIVGHVFSHEKA----------------------------
+------------------------------------------------------------
+----------------------------------------------LRDQAKK--MNVDS
+L------------------------RS-NVDKSKEAAEIRIAKAAITICFLFFASWTPYG
+VMSLIGAF-GDK-T--LLTPGATMIPACTCKMVACIDPFVYAISHPRYRMELQ-------
+--KRCP----WLAISE---KAPE--SRAAI--STSTTQEQ-Q------------------
+-------QT---------------------------------------------------
+-------------------TA-A---
+>    16== M17730   1 D.melanogaster Rh4 opsin <>[J.Neurosci.7,1558-1566'87]
+M--------------------------------EPLC-----------------------
+-----------------------------------NASE-----------PP-------L
+RPEA------------------R-SSGNGDLQFLGWNVPPDQIQ----------------
+--YIPEHW------------LT---------QLEPPASM--------------HYMLGVF
+YIFLFCASTVGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDLIMCLK--APIF--NS-FH-
+RGFAIYLGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNVITKPMNR--NMTFTKAVIMN
+IIIWLYCTPW-VVLPLTQFWDRFVP-------EGY----LTSCSFDYLS--DNFDTRLFV
+GTIFFFSFVCPTLMILYYYSQIVGHVFSHEKA----------------------------
+------------------------------------------------------------
+----------------------------------------------LREQAKK--MNVES
+L------------------------RS-NVDKSKETAEIRIAKAAITICFLFFVSWTPYG
+VMSLIGAF-GDK-S--LLTQGATMIPACTCKLVACIDPFVYAISHPRYRLELQ-------
+--KRCP----WLGVNE---KSGE--ISSAQ--ST-TTQEQ-Q------------------
+-------QT---------------------------------------------------
+-------------------TA-A---
+>    17== X65880   1 Drosophila pseudoobscura Dpse\Rh4 <>[Genetics132(1),193-204'92
+M--------------------------------DALC-----------------------
+-----------------------------------NASE-----------PP-------L
+RPEA------------------RMSSGSDELQFLGWNVPPDQIQ----------------
+--YIPEHW------------LT---------QLEPPASM--------------HYMLGVF
+YIFLFFASTLGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDLIMCLK--APIFIYNS-FH-
+RGFA--LGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNVITKPMNR--NMTFTKAVIMN
+IIIWLYCTPW-VVLPLTQFWDRFVP-------EGY----LTSCSFDYLS--DNFDTRLFV
+GTIFLFSFVVPTLMILYYYSQIVGHVFNHEKA----------------------------
+------------------------------------------------------------
+----------------------------------------------LREQAKK--MNVES
+L------------------------RS-NVDKSKETAEIRIAKAAITICFLFFVSWTPYG
+VMSLIGAF-GDK-S--LLTPGATMIPACTCKLVACIEPFVYAISHPRYRMELQ-------
+--KRCP----WLGVNE---KSGE--ASSAQ--ST-TTQEQTQ------------------
+-------QT---------------------------------------------------
+-------------------SA-A---
+>    18== D50584   1 Hemigrapsus sanguineus opsin BcRh2 <compound eye>[J.Exp.Biol.1
+M--------------------------------------------TNATGPQMAYYGAAS
+MDFGYPE----------------------------GVSI-----------VD--------
+------------------------------------FVRPEIKP----------------
+--YVHQHW------------YN---------YPPVNPMW--------------HYLLGVI
+YLFLGTVSIFGNGLVIYLFNKSAALRTPANILVVNLALSDLIMLTTN-VPFFTYNC-FSG
+GVWM--FSPQYCEIYACLGAITGVCSIWLLCMISFDRYNIICNGFNG-PKLTTGKAVVFA
+LISWVIAIGC-ALPPFFG-WGNYIL-------EGI----LDSCSYDYLT--QDFNTFSYN
+IFIFVFDYFLPAAIIVFSYVFIVKAIFAHEAA----------------------------
+------------------------------------------------------------
+----------------------------------------------MRAQAKK--MNVST
+L------------------------RS-N-EADAQRAEIRIAKTALVNVSLWFICWTPYA
+LISLKGVM-GDT-S--GITPLVSTLPALLAKSCSCYNPFVYAISHPKYRLAIT-------
+--QHLP----WFCVHE---TETKS-NDDSQ--SNSTVAQ---------------------
+------------------------------------------------------------
+-------------------DK-A---
+>    19== D50583   1 Hemigrapsus sanguineus opsin BcRh1 <compound eye>[J.Exp.Biol.1
+M--------------------------------------------ANVTGPQMAFYGSGA
+ATFGYPE----------------------------GMTV-----------AD--------
+------------------------------------FVPDRVKH----------------
+--MVLDHW------------YN---------YPPVNPMW--------------HYLLGVV
+YLFLGVISIAGNGLVIYLYMKSQALKTPANMLIVNLALSDLIMLTTN-FPPFCYNC-FSG
+GRWM--FSGTYCEIYAALGAITGVCSIWTLCMISFDRYNIICNGFNG-PKLTQGKATFMC
+GLAWVISVGW-SLPPFFG-WGSYTL-------EGI----LDSCSYDYFT--RDMNTITYN
+ICIFIFDFFLPASVIVFSYVFIVKAIFAHEAA----------------------------
+------------------------------------------------------------
+----------------------------------------------MRAQAKK--MNVTN
+L------------------------RS-N-EAETQRAEIRIAKTALVNVSLWFICWTPYA
+AITIQGLL-GNA-E--GITPLLTTLPALLAKSCSCYNPFVYAISHPKFRLAIT-------
+--QHLP----WFCVHE---KDPND-VEENQ--SSNTQTQ---------------------
+------------------------------------------------------------
+-------------------EK-S---
+>    20== K02320   1 D.melanogaster opsin <>[Cell40,851-858'85]
+M--------------------------------E------SFAVAAAQLGPHFAPLS---
+-----------------------------------NGSV-----------VD--------
+------------------------------------KVTPDMAH----------------
+--LISPYW------------NQ---------FPAMDPIW--------------AKILTAY
+MIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-TPMMGINL-YF-
+ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG-RPMTIPLALGKM
+----------------------YVP-------EGN----LTSCGIDYLE--RDWNPRSYL
+IFYSIFVYYIPLFLICYSYWFIIAAVSAHEKA----------------------------
+------------------------------------------------------------
+----------------------------------------------MREQAKK--MNVKS
+L------------------------RS-S-EDAEKSAEGKLAKVALVTITLWFMAWTPYL
+VINCMGLF--KF-E--GLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALK-------
+--EKCP----CCVFGK---VDDGK-SSDAQ--SQATASEA-E------------------
+------------------------------------------------------------
+-------------------SK-A---
+>    21== K02315   1 D.melanogaster ninaE <>[Cell40,839-850'85]
+M--------------------------------E------SFAVAAAQLGPHFAPLS---
+-----------------------------------NGSV-----------VD--------
+------------------------------------KVTPDMAH----------------
+--LISPYW------------NQ---------FPAMDPIW--------------AKILTAY
+MIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-TPMMGINL-YF-
+ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG-RPMTIPLALGKI
+AYIWFMSSIW-CLAPAFG-WSRYVP-------EGN----LTSCGIDYLE--RDWNPRSYL
+IFYSIFVYYIPLFLICYSYWFIIAAVSAHEKA----------------------------
+------------------------------------------------------------
+----------------------------------------------MREQAKK--MNVKS
+L------------------------RS-S-EDAEKSAEGKLAKVALVTITLWFMAWTPYL
+VINCMGLF--KF-E--GLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALK-------
+--EKCP----CCVFGK---VDDGK-SSDAQ--SQATASEA-E------------------
+------------------------------------------------------------
+-------------------SK-A---
+>    22== X65877   1 Drosophila pseudoobscura Dpse\ninaE <>[Genetics132(1),193-204'
+M--------------------------------D------SFAAVATQLGPQFAAPS---
+-----------------------------------NGSV-----------VD--------
+------------------------------------KVTPDMAH----------------
+--LISPYW------------DQ---------FPAMDPIW--------------AKILTAY
+MIIIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-TPMMGINL-YF-
+ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG-RPMTIPLALGKI
+AYIWFMSTIWCCLAPVFG-WSRYVP-------EGN----LTSCGIDYLE--RDWNPRSYL
+IFYSIFVYYIPLFLICYSYWFIIAAVSAHEKA----------------------------
+------------------------------------------------------------
+----------------------------------------------MREQAKK--MNVKS
+L------------------------RS-S-EDADKSAEGKLAKVALVTISLWFMAWTPYL
+VINCMGLF--KF-E--GLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALK-------
+--EKCP----CCVFGK---VDDGK-SSEAQ--SQATTSEA-E------------------
+------------------------------------------------------------
+-------------------SK-A---
+>    23== M12896   1 D.melanogaster Rh2 <>[Cell44,705-710'86]
+M--------------------------------ER-SHLPETPFDLAHSGPRFQAQSSG-
+-----------------------------------NGSV-----------LD--------
+------------------------------------NVLPDMAH----------------
+--LVNPYW------------SR---------FAPMDPMM--------------SKILGLF
+TLAIMIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMASQ-SPVMIINF-YY-
+ETWV--LGPLWCDIYAGCGSLFGCVSIWSMCMIAFDRYNVIVKGING-TPMTIKTSIMKI
+LFIWMMAVFW-TVMPLIG-WSAYVP-------EGN----LTACSIDYMT--RMWNPRSYL
+ITYSLFVYYTPLFLICYSYWFIIAAVAAHEKA----------------------------
+------------------------------------------------------------
+----------------------------------------------MREQAKK--MNVKS
+L------------------------RS-S-EDCDKSAEGKLAKVALTTISLWFMAWTPYL
+VICYFGLF--KI-D--GLTPLTTIWGATFAKTSAVYNPIVYGISHPKYRIVLK-------
+--EKCP----MCVFGN---TDEPKPDAPAS--DTETTSEA-D------------------
+------------------------------------------------------------
+-------------------SK-A---
+>    24== X65878   1 Drosophila pseudoobscura Dpse\Rh2 <>[Genetics132(1),193-204'92
+M--------------------------------ER-SLLPEPPLAMALLGPRFEAQTGG-
+-----------------------------------NRSV-----------LD--------
+------------------------------------NVLPDMAP----------------
+--LVNPHW------------SR---------FAPMDPTM--------------SKILGLF
+TLVILIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMASQ-SPVMIINF-YY-
+ETWV--LGPLWCDIYAACGSLFGCVSIWSMCMIAFDRYNVIVKGING-TPMTIKTSIMKI
+AFIWMMAVFW-TIMPLIG-WSSYVP-------EGN----LTACSIDYMT--RQWNPRSYL
+ITYSLFVYYTPLFMICYSYWFIIATVAAHEKA----------------------------
+------------------------------------------------------------
+----------------------------------------------MRDQAKK--MNVKS
+L------------------------RS-S-EDCDKSAENKLAKVALTTISLWFMAWTPYL
+IICYFGLF--KI-D--GLTPLTTIWGATFAKTSAVYNPIVYGISHPNDRLVLK-------
+--EKCP----MCVCGT---TDEPKPDAPPS--DTETTSEA-E------------------
+------------------------------------------------------------
+-------------------SK-D---
+>    25== U26026   1 Apis mellifera long-wavelength rhodopsin <>[]
+M--------------------------------------------IAVSGPSYEAFSYG-
+---GQAR--------------------------FNNQTV-----------VD--------
+------------------------------------KVPPDMLH----------------
+--LIDANW------------YQ---------YPPLNPMW--------------HGILGFV
+IGMLGFVSAMGNGMVVYIFLSTKSLRTPSNLFVINLAISNFLMMFCM-SPPMVINC-YY-
+ETWV--LGPLFCQIYAMLGSLFGCGSIWTMTMIAFDRYNVIVKGLSG-KPLSINGALIRI
+IAIWLFSLGW-TIAPMFG-WNRYVP-------EGN----MTACGTDYFN--RGLLSASYL
+VCYGIWVYFVPLFLIIYSYWFIIQAVAAHEKN----------------------------
+------------------------------------------------------------
+----------------------------------------------MREQAKK--MNVAS
+L------------------------RS-S-ENQNTSAECKLAKVALMTISLWFMAWTPYL
+VINFSGIF--NL-V--KISPLFTIWGSLFAKANAVYNPIVYGISHPKYRAALF-------
+--AKFP----SLAC-A---AEPSS-DAVST--TSGTTTVT-D------------------
+------------------------------------------------------------
+---------------NEK-SN-A---
+>    26== L03781   1 Limulus polyphemus opsin <>[PNAS90,6150-6154'93]
+M----------------------------------------------ANQLSYSSLGWP-
+---YQP-----------------------------NASV-----------VD--------
+------------------------------------TMPKEMLY----------------
+--MIHEHW------------YA---------FPPMNPLW--------------YSILGVA
+MIILGIICVLGNGMVIYLMMTTKSLRTPTNLLVVNLAFSDFCMMAFM-MPTMTSNC-FA-
+ETWI--LGPFMCEVYGMAGSLFGCASIWSMVMITLDRYNVIVRGMAA-APLTHKKATLLL
+LFVWIWSGGW-TILPFFG-WSRYVP-------EGN----LTSCTVDYLT--KDWSSASYV
+VIYGLAVYFLPLITMIYCYFFIVHAVAEHEKQ----------------------------
+------------------------------------------------------------
+----------------------------------------------LREQAKK--MNVAS
+L------------------------RANA-DQQKQSAECRLAKVAMMTVGLWFMAWTPYL
+IISWAGVF--SSGT--RLTPLATIWGSVFAKANSCYNPIVYGISHPRYKAALY-------
+--QRFP----SLACGS---GESGS-DVKSE--ASATTTME-E------------------
+------------------------------------------------------------
+---------------KPKIPE-A---
+>    27== X07797   1 Octopus dofleini rhodopsin <>[FEBS232(1),69-72'88]
+M-----------------------------------------------------------
+---VESTTLV------------------NQTWWY-NPTV-----------D---------
+------------------------------------------------------------
+---IHPHW------------AK---------FDPIPDAV--------------YYSVGIF
+IGVVGIIGILGNGVVIYLFSKTKSLQTPANMFIINLAMSDLSFSAINGFPLKTISA-FM-
+KKWI--FGKVACQLYGLLGGIFGFMSINTMAMISIDRYNVIGRPMAASKKMSHRRAFLMI
+IFVWMWSIVW-SVGPVFN-WGAYVP-------EGI----LTSCSFDYLS--TDPSTRSFI
+LCMYFCGFMLPIIIIAFCYFNIVMSVSNHEKE----------------------------
+------------------------------------------------------------
+----------------------------------------------MAAMAKR--LNAKE
+L------------------------RK---AQAGASAEMKLAKISMVIITQFMLSWSPYA
+IIALLAQF-GPA-E--WVTPYAAELPVLFAKASAIHNPIVYSVSHPKFREAIQ-------
+--TTFPWLLTCCQFDE---KECED-ANDAE--EEVVASER---GGESRD-AAQMKEMMAM
+MQKMQAQQAAYQPPPPPQGY--PPQGYPPQGAYPPPQGYPPQGYPPQGYPPQGYPPQGAP
+PQVEAPQGAPPQGVDNQA-YQ-A---
+>    28== X70498   1 Todarodes pacificus rhodopsin <retina>[FEBS317(1-2),5-11'93]
+M-----------------------------------------------------------
+---GRDLR-D------------------NETWWY-NPSI-----------V---------
+------------------------------------------------------------
+---VHPHW------------RE---------FDQVPDAV--------------YYSLGIF
+IGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISC-FL-
+KKWI--FGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMI
+IFVWLWSVLW-AIGPIFG-WGAYTL-------EGV----LCNCSFDYIS--RDSTTRSNI
+LCMFILGFFGPILIIFFCYFNIVMSVSNHEKE----------------------------
+------------------------------------------------------------
+----------------------------------------------MAAMAKR--LNAKE
+L------------------------RK---AQAGANAEMRLAKISIVIVSQFLLSWSPYA
+VVALLAQF-GPL-E--WVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAIS-------
+--QTFPWVLTCCQFDD---KETED-DKDAE--TEIPAGES-SDAAPSAD-AAQMKEMMAM
+MQKMQQQQAAY----PPQGYAPPPQGYPPQGY--PPQGYPPQGYPPQGYPP---PPQGAP
+PQ-GAPPAAPPQGVDNQA-YQ-A---
+>    29== L21195   1 human serotonin 5-HT7 receptor protein <placenta and fetal bra
+MMDVNSSGRPDLY-----------------------------------------------
+-----------------GHLRSFL--LPEVGR---GLPD--------------------L
+SPDGGADPVAGSWAPHLLS---EVTA----------------------------------
+--SPAPTW-----------------------DAPPDNAS--GCGEQINYGRVEKVVIGSI
+LTLITLLTIAGNCLVVISVCFVKKLRQPSNYLIVSLALADLSVAVAV-MPFVSVTDLIG-
+GKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAKMI
+LSVWLLSASI-TLPPLFG-WAQNVN--DDK---------VCLISQDF----------GYT
+IYSTAVAFYIPMSVMLFMYYQIYKAAR---------------------------------
+-----------------KSAAKHKFPGFPRVEPDSVI----------------------A
+LNGIVK----------------------LQKEVEECAN--------LSRLLKH-------
+-------------------------ER-K-NISIFKREQKAATTLGIIVGAFTVCWLPFF
+LLSTARPFICGT-SCSCIPLWVERTFLWLGYANSLINPFIYAFFNRDLRTTYR-SLL---
+----------QCQYRN-INRKLSA-AGMHE--ALKLAERP-E--------RPEF-----V
+LQNADY--------CRKKGHD---------------------------------------
+----------------------S---
+>    30== L15228   1 rat 5HT-7 serotonin receptor <>[JBC268,18200-18204'93]
+M-----------------------------------------------------------
+------------------------------------------------------------
+--------------PHLLSGFLEVTA----------------------------------
+--SPAPTW-----------------------DAPPDNVS--GCGEQINYGRVEKVVIGSI
+LTLITLLTIAGNCLVVISVSFVKKLRQPSNYLIVSLALADLSVAVAV-MPFVSVTDLIG-
+GKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAKMI
+LSVWLLSASI-TLPPLFG-WAQNVN--DDK---------VCLISQDF----------GYT
+IYSTAVAFYIPMSVMLFMYYQIYKAAR---------------------------------
+-----------------KSAAKHKFPGFPRVQPESVI----------------------S
+LNGVVK----------------------LQKEVEECAN--------LSRLLKH-------
+-------------------------ER-K-NISIFKREQKAATTLGIIVGAFTVCWLPFF
+LLSTARPFICGT-SCSCIPLWVERTCLWLGYANSLINPFIYAFFNRDLRPTSR-SLL---
+----------QCQYRN-INRKLSA-AGMHE--ALKLAERP-E--------RSEF-----V
+LQNSDH--------CGKKGHD---------------------------------------
+----------------------T---
+>    31=p A47425 serotonin receptor 5HT-7 - rat
+M-----------------------------------------------------------
+------------------------------------------------------------
+--------------PHLLSGFLEVTA----------------------------------
+--SPAPTW-----------------------DAPPDNVS--GCGEQINYGRVEKVVIGSI
+LTLITLLTIAGNCLVVISVSFVKKLRQPSNYLIVSLALADLSVAVAV-MPFVSVTDLIG-
+GKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAKMI
+LSVWLLSASI-TLPPLFG-WAQNVN--DDK---------VCLISQDF----------GYT
+IYSTAVAFYIPMSVMLFMYYQIYKAAR---------------------------------
+-----------------KSAAKHKFPGFPRVQPESVI----------------------S
+LNGVVK----------------------LQKEVEECAN--------LSRLLKH-------
+-------------------------ER-K-NISIFKREQKAATTLGIIVGAFTVCWLPFF
+LLSTARPFICGT-SCSCIPLWVERTCLWLGYANSLINPFIYAFFNRDLRTTYR-SLL---
+----------QCQYRN-INRKLSA-AGMHE--ALKLAERP-E--------RSEF-----V
+LQNSDH--------CGKKGHD---------------------------------------
+----------------------T---
+>    32== M83181   1 human serotonin receptor <>[JBC267(11),7553-7562'92]
+M-DVLSPGQ---------------------------------------------------
+-----------------GNNTTSPPAPFETGG---NTTG--------------------I
+-------------------------S----------------------------------
+--DVTVSY---------------------------------------------QVITSLL
+LGTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLV-LPMAALYQ-VL-
+NKWT--LGQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVNKRTPRRAAALI
+SLTWLIGFLI-SIPPMLG-WRTPEDRSDPD---------ACTISKDH----------GYT
+IYSTFGAFYIPLLLMLVLYGRIFRAARFRIRK----------------------------
+-----------TVKKVEKTGADTRHGASPAPQPKKSVNGESGSRNWRLGVESKAGGAL-C
+ANGAVRQGDDGAALEVIEVHRVGNSKEHLPLPSEAGPTPCAP-----ASFERK-------
+----NERNA----------------EA-K-RKMALARERKTVKTLGIIMGTFILCWLPFF
+IVALVLPF-CES-SC-HMPTLLGAIINWLGYSNSLLNPVIYAYFNKDFQNAFK-KII---
+----------KCKFCR--------------------------------------------
+------------------------------------------------------------
+----------------------Q---
+>    33=p A35181 serotonin receptor class 1A - rat
+M-DVFSFGQ---------------------------------------------------
+-----------------GNNTTASQEPFGTGG---NVTS--------------------I
+-------------------------S----------------------------------
+--DVTFSY---------------------------------------------QVITSLL
+LGTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLV-LPMAALYQ-VL-
+NKWT--LGQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVNKRTPRRAAALI
+SLTWLIGFLI-SIPPMLG-WRTPEDRSDPD---------ACTISKDH----------GYT
+IYSTFGAFYIPLLLMLVLYGRIFRAARFRIRK----------------------------
+-----------TVRKVEKKGAGTSLGTSSAPPPKKSLNGQPGSGDWRRCAENRAVGTP-C
+TNGAVRQGDDEATLEVIEVHRVGNSKEHLPLPSESGSNSYAP-----ACLERK-------
+----NERNA----------------EA-K-RKMALARERKTVKTLGIIMGTFILCWLPFF
+IVALVLPF-CES-SC-HMPALLGAIINWLGYSNSLLNPVIYAYFNKDFQNAFK-KII---
+----------KCKFCR--------------------------------------------
+------------------------------------------------------------
+----------------------R---
+>    34== L06803   1 Lymnaea stagnalis serotonin receptor <>[PNAS90,11-15'93]
+M-ANFTFGDLALD-----------------------------------------------
+-------------VARMGGLASTPSGLRSTGL---TTPG--------------------L
+SPTG------------------LVTS----------------------------------
+--DFNDSYGLTGQFINGSHSSRSRDNASAN-DTSATNMTDDRYWSLTVYSHEHLVLTSVI
+LGLFVLCCIIGNCFVIAAVMLERSLHNVANYLILSLAVADLMVAVLV-MPLSVVSE-IS-
+KVWF--LHSEVCDMWISVDVLCCTASILHLVAIAMDRYWAVTS-IDYIRRRSARRILLMI
+MVVWIVALFI-SIPPLFG-WRDPNN--DPD------KTGTCIISQDK----------GYT
+IFSTVGAFYLPMLVMMIIYIRIWLVARSRIRKDKFQMTKARLKTEETTLVASPKTEYSVV
+SDCNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKK----------------NRAKKLPEN
+ANGVNSNSSSSERLKQIQIE-----------TAEAFANGCAEEAS-IAMLERQ-CNNGKK
+ISSNDTPYS----------------RT-R-EKLELKRERKAARTLAIITGAFLICWLPFF
+IIALIGPF-VDP-E--GIPPFARSFVLWLGYFNSLLNPIIYTIFSPEFRSAFQ-KIL---
+----------FGKYRR--------------------------------------------
+------------------GH----------------------------------------
+----------------------R---
+>    35=p A47174 serotonin receptor, 5HTlym receptor - great pond snail
+M-ANFTFGDLALD-----------------------------------------------
+-------------VARMGGLASTPSGLRSTGL---TTPG--------------------L
+SPTG------------------LVTS----------------------------------
+--DFNDSYGLTGQFINGSHSSRSRDNASAN-DTSATNMTDDRYWSLTVYSHEHLVLTSVI
+LGLFVLCCIIGNCFVIAAVMLERSLHNVANYLILSLAVADLMVAVLV-MPLSVVSE-IS-
+KVWF--LHSEVCDMWISVDVLCCTASILHLVAIAMDRYWAVTS-IDYIRRRSARRILLMI
+MVVWIVALFI-SIPPLFG-WRDPNN--DPD------KTGTCIISQDK----------GYT
+IFSTVGAFYLPMLVMMIIYIRIWLVARSRIRKDKFQMTKARLKTEETTLVASPKTEYSVV
+SDCNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKK----------------NRAKKLPEN
+ANGVNSNSSSSERLKQIQIE-----------TAEAFANGCAEEAS-IAMLERQ-CNNGKK
+ISSNDTPYS----------------RT-R-EKLELKRERKAARTLAIITGAFLICWLPFF
+IIALIGPF-VDP-E--GIPPFARSFVLWLGYFNSLLNPIIYTIFSPEFRSAFQ-KIL---
+----------FGKYRR--------------------------------------------
+------------------GH----------------------------------------
+----------------------R---
+>    36== X95604   1 Bombyx mori serotonin receptor <antennae>[InsectBiochem.Mol.Bi
+M-EGAE-GQEELDWEA--------------------------------------------
+---------LYLRLP-----------LQNCSW---NSTG--------------------W
+EPNW------------------NVTV----------------------------------
+--VPNTTW----------------WQASAPFDTPAALVR--------------AAAKAVV
+LGLLILATVVGNVFVIAAILLERHLRSAANNLILSLAVADLLVACLV-MPLGAVYE-VV-
+QRWT--LGPELCDMWTSGDVLCCTASILHLVAIALDRYWAVTN-IDYIHASTAKRVGMMI
+ACVWTVSFFV-CIAQLLG-WK------DPDWNQRVSEDLRCVVSQDV----------GYQ
+IFATASSFYVPVLIILILYWRIYQTARKRIRR----------------------------
+-----------------RRGATARGGVGPPPVP---------------------------
+AGGALVAGGGSGGIAAAVVAVIGRP---LPTISETTTTGFTNVSSNNTSPEKQSCANGLE
+A---DPPTTGYGAVAAAYYPSLVRRKP-K-EAADSKRERKAAKTLAIITGAFVACWLPFF
+VLAILVPT-CDC-E---VSPVLTSLSLWLGYFNSTLNPVIYTVFSPEFRHAFQ-RLL---
+----------CGRRVRRR------------------------------------------
+-----------------RAP----------------------------------------
+----------------------Q---