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[jabaws.git] / website / archive / binaries / mac / src / mafft / test / sample.fftns2
diff --git a/website/archive/binaries/mac/src/mafft/test/sample.fftns2 b/website/archive/binaries/mac/src/mafft/test/sample.fftns2
deleted file mode 100644 (file)
index c3f02b2..0000000
--- a/website/archive/binaries/mac/src/mafft/test/sample.fftns2
+++ /dev/null
@@ -1,468 +0,0 @@
->     1== M63632   1 Lampetra japonica rhodopsin <>[BBRC174,1125-1132'91]
-------------------------------------------------------------
----------MNGTE--GDNFYVP----FSNKTGLARSPYEYPQY-YLAEPWK--------
--YSALAAYMFFLILVGFPVNFLTLFVTVQHKKLRTPLNYILLNLAMANLFMVLFG-FTVT
-MYTSMN-GYFV--FGPTMCSIEGFFATLGGEVALWSLVVLAIERYIVICKPMGN-FRFGN
-THAIMGVAFTWIMALAC-AAPPLVG-W-----SRYIPEGMQCSCGPDYYTLNPNFNNESY
-VVYMFVVHFLVPFVIIFFCYGRLLCTV---------------------------------
-------------------------------------------------------------
-------------------------------KEAAAAQQ----------ESASTQKA----
--------------------------EKEVTRMVVLMVIGFLVCWVPYASVAFYIFTHQGS
-D---FGATFMTLPAFFAKSSALYNPVIYILMNKQFRNCMITTLCCGKN------PLGDDE
---SGASTSKTEVSSVS-TSPVSPA------------------------------------
----------------------------------------------------
->     2== U22180   1 rat opsin <rod>[J.Mol.Neurosci.5(3),207-209'94]
-------------------------------------------------------------
----------MNGTE--GPNFYVP----FSNITGVVRSPFEQPQY-YLAEPWQ--------
--FSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGG-FTTT
-LYTSLH-GYFV--FGPTGCNLEGFFATLGGEIGLWSLVVLAIERYVVVCKPMSN-FRFGE
-NHAIMGVAFTWVMALAC-AAPPLVG-W-----SRYIPEGMQCSCGIDYYTLKPEVNNESF
-VIYMFVVHFTIPMIVIFFCYGQLVFTV---------------------------------
-------------------------------------------------------------
-------------------------------KEAAAQQQ----------ESATTQKA----
--------------------------EKEVTRMVIIMVIFFLICWLPYASVAMYIFTHQGS
-N---FGPIFMTLPAFFAKTASIYNPIIYIMMNKQFRNCMLTSLCCGKN------PLGDDE
---ASATASKTE------TSQVAPA------------------------------------
----------------------------------------------------
->     3== M92038   1 chicken green sensitive cone opsin <retina>[PNAS89,5932-5936'9
-------------------------------------------------------------
----------MNGTE--GINFYVP----MSNKTGVVRSPFEYPQY-YLAEPWK--------
--YRLVCCYIFFLISTGLPINLLTLLVTFKHKKLRQPLNYILVNLAVADLFMACFG-FTVT
-FYTAWN-GYFV--FGPVGCAVEGFFATLGGQVALWSLVVLAIERYIVVCKPMGN-FRFSA
-THAMMGIAFTWVMAFSC-AAPPLFG-W-----SRYMPEGMQCSCGPDYYTHNPDYHNESY
-VLYMFVIHFIIPVVVIFFSYGRLICKV---------------------------------
-------------------------------------------------------------
-------------------------------REAAAQQQ----------ESATTQKA----
--------------------------EKEVTRMVILMVLGFMLAWTPYAVVAFWIFTNKGA
-D---FTATLMAVPAFFSKSSSLYNPIIYVLMNKQFRNCMITTICCGKN------PFGDED
-VSSTVSQSKTEVSSVS-SSQVSPA------------------------------------
----------------------------------------------------
->     4=p A45229 opsin, green-sensitive (clone GFgr-1) - goldfish
-------------------------------------------------------------
----------MNGTE--GKNFYVP----MSNRTGLVRSPFEYPQY-YLAEPWQ--------
--FKILALYLFFLMSMGLPINGLTLVVTAQHKKLRQPLNFILVNLAVAGTIMVCFG-FTVT
-FYTAIN-GYFV--LGPTGCAVEGFMATLGGEVALWSLVVLAIERYIVVCKPMGS-FKFSS
-SHAFAGIAFTWVMALAC-AAPPLFG-W-----SRYIPEGMQCSCGPDYYTLNPDYNNESY
-VIYMFVCHFILPVAVIFFTYGRLVCTV---------------------------------
-------------------------------------------------------------
-------------------------------KAAAAQQQ----------DSASTQKA----
--------------------------EREVTKMVILMVFGFLIAWTPYATVAAWIFFNKGA
-D---FSAKFMAIPAFFSKSSALYNPVIYVLLNKQFRNCMLTTIFCGKN------PLGDDE
--SSTVSTSKTEVSS------VSPA------------------------------------
----------------------------------------------------
->     5=p B45229 opsin, green-sensitive (clone GFgr-2) - goldfish
-------------------------------------------------------------
----------MNGTE--GNNFYVP----LSNRTGLVRSPFEYPQY-YLAEPWQ--------
--FKLLAVYMFFLICLGLPINGLTLICTAQHKKLRQPLNFILVNLAVAGAIMVCFG-FTVT
-FYTAIN-GYFA--LGPTGCAVEGFMATLGGEVALWSLVVLAIERYIVVCKPMGS-FKFSS
-THASAGIAFTWVMAMAC-AAPPLVG-W-----SRYIPEGIQCSCGPDYYTLNPEYNNESY
-VLYMFICHFILPVTIIFFTYGRLVCTV---------------------------------
-------------------------------------------------------------
-------------------------------KAAAAQQQ----------DSASTQKA----
--------------------------EREVTKMVILMVLGFLVAWTPYATVAAWIFFNKGA
-A---FSAQFMAIPAFFSKTSALYNPVIYVLLNKQFRSCMLTTLFCGKN------PLGDEE
--SSTVSTSKTEVSS------VSPA------------------------------------
----------------------------------------------------
->     6== L11864   1 Carassius auratus blue cone opsin <retina>[Biochemistry32,208-
-------------------------------------------------------------
----------MKQVPEFHEDFYIPIPLDINNLS--AYSPFLVPQD-HLGNQGI--------
--FMAMSVFMFFIFIGGASINILTILCTIQFKKLRSHLNYILVNLSIANLFVAIFG-SPLS
-FYSFFN-RYFI--FGATACKIEGFLATLGGMVGLWSLAVVAFERWLVICKPLGN-FTFKT
-PHAIAGCILPWISALAA-SLPPLFG-W-----SRYIPEGLQCSCGPDWYTTNNKYNNESY
-VMFLFCFCFAVPFGTIVFCYGQLLITL---------------------------------
-------------------------------------------------------------
-------------------------------KLAAKAQA----------DSASTQKA----
--------------------------EREVTKMVVVMVLGFLVCWAPYASFSLWIVSHRGE
-E---FDLRMATIPSCLSKASTVYNPVIYVLMNKQFRSCMM-KMVCGKN-------IEEDE
---ASTSSQVTQVSS------VAPEK-----------------------------------
----------------------------------------------------
->     7== M13299   1 human BCP <>[Science232(4747),193-202'86]
-------------------------------------------------------------
----------MRKMS--EEEFYL-----FKNISSV--GPWDGPQY-HIAPVWA--------
--FYLQAAFMGTVFLIGFPLNAMVLVATLRYKKLRQPLNYILVNVSFGGFLLCIFS-VFPV
-FVASCN-GYFV--FGRHVCALEGFLGTVAGLVTGWSLAFLAFERYIVICKPFGN-FRFSS
-KHALTVVLATWTIGIGV-SIPPFFG-W-----SRFIPEGLQCSCGPDWYTVGTKYRSESY
-TWFLFIFCFIVPLSLICFSYTQLLRAL---------------------------------
-------------------------------------------------------------
-------------------------------KAVAAQQQ----------ESATTQKA----
--------------------------EREVSRMVVVMVGSFCVCYVPYAAFAMYMVNNRNH
-G---LDLRLVTIPSFFSKSACIYNPIIYCFMNKQFQACIM-KMVCGKA-------MTDES
---DTCSSQKTEVSTVS-STQVGPN------------------------------------
----------------------------------------------------
->     8=opsin, greensensitive  human (fragment) S07060
-------------------------------------------------------------
-------------------------------------------------------------
------------------------------------------------DLAETVIA-STIS
-IVNQVS-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGN-VRFDA
-KLAIVGIAFSWIWAAVW-TAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSSYPGVQSY
-MIVLMVTCCITPLSIIVLCYLQVWLAI---------------------------------
-------------------------------------------------------------
-------------------------------RAVAKQQK----------ESESTQKA----
--------------------------EKEVTRMVVVMVLAFC-------------------
-------------------------------------------------------------
-------------------------------------------------------------
----------------------------------------------------
->     9== K03494   1 human GCP <>[Science232(4747),193-202'86]
-----------------------------------------------------------MA
-QQWSLQRLAGRHPQDSYEDSTQSSIFTYTNSNS-TRGPFEGPNY-HIAPRWV--------
--YHLTSVWMIFVVIASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIA-STIS
-VVNQVY-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWMVVCKPFGN-VRFDA
-KLAIVGIAFSWIWAAVW-TAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSSYPGVQSY
-MIVLMVTCCITPLSIIVLCYLQVWLAI---------------------------------
-------------------------------------------------------------
-------------------------------RAVAKQQK----------ESESTQKA----
--------------------------EKEVTRMVVVMVLAFCFCWGPYAFFACFAAANPGY
-P---FHPLMAALPAFFAKSATIYNPVIYVFMNRQFRNCILQLF-----------GKKVDD
-GSELSSASKTEVSSV---SSVSPA------------------------------------
----------------------------------------------------
->    10== Z68193   1 human Red Opsin <>[]
-----------------------------------------------------------MA
-QQWSLQRLAGRHPQDSYEDSTQSSIFTYTNSNS-TRGPFEGPNY-HIAPRWV--------
--YHLTSVWMIFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIA-STIS
-IVNQVS-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGN-VRFDA
-KLAIVGIAFSWIWSAVW-TAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSSYPGVQSY
-MIVLMVTCCIIPLAIIMLCYLQVWLAI---------------------------------
-------------------------------------------------------------
-------------------------------RAVAKQQK----------ESESTQKA----
--------------------------EKEVTRMVVVMIFAYCVCWGPYTFFACFAAANPGY
-A---FHPLMAALPAYFAKSATIYNPVIYVFMNRQFRNCILQLF-----------GKKVDD
-GSELSSASKTEVSSV---SSVSPA------------------------------------
----------------------------------------------------
->    11== M92036   1 Gecko gecko P521 <retina>[PNAS89,6841-6845'92]
-----------------------------------------------------------MT
-EAWNVAVFAARRSRDD-DDTTRGSVFTYTNTNN-TRGPFEGPNY-HIAPRWV--------
--YNLVSFFMIIVVIASCFTNGLVLVATAKFKKLRHPLNWILVNLAFVDLVETLVA-STIS
-VFNQIF-GYFI--LGHPLCVIEGYVVSSCGITGLWSLAIISWERWFVVCKPFGN-IKFDS
-KLAIIGIVFSWVWAWGW-SAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSVELGCQSF
-MLTLMITCCFLPLFIIIVCYLQVWMAI---------------------------------
-------------------------------------------------------------
-------------------------------RAVAAQQK----------ESESTQKA----
--------------------------EREVSRMVVVMIVAFCICWGPYASFVSFAAANPGY
-A---FHPLAAALPAYFAKSATIYNPVIYVFMNRQFRNCIMQLF-----------GKKVDD
-GSEASTTSRTEVSSVS-NSSVAPA------------------------------------
----------------------------------------------------
->    12== M62903   1 chicken visual pigment <>[BBRC173,1212-1217'90]
------------------------------------------------------------M
-AAWEAAFAARRRHEE--EDTTRDSVFTYTNSNN-TRGPFEGPNY-HIAPRWV--------
--YNLTSVWMIFVVAASVFTNGLVLVATWKFKKLRHPLNWILVNLAVADLGETVIA-STIS
-VINQIS-GYFI--LGHPMCVVEGYTVSACGITALWSLAIISWERWFVVCKPFGN-IKFDG
-KLAVAGILFSWLWSCAW-TAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSSDPGVQSY
-MVVLMVTCCFFPLAIIILCYLQVWLAI---------------------------------
-------------------------------------------------------------
-------------------------------RAVAAQQK----------ESESTQKA----
--------------------------EKEVSRMVVVMIVAYCFCWGPYTFFACFAAANPGY
-A---FHPLAAALPAYFAKSATIYNPIIYVFMNRQFRNCILQLF-----------GKKVDD
-GSEVST-SRTEVSSVS-NSSVSPA------------------------------------
----------------------------------------------------
->    13== S75720   1 chicken P-opsin <>[Science267(5203),1502-1506'95]
-------------------------------------------------------------
----------------------MSSNSSQAPPNG-TPGPFDGPQWPYQAPQST--------
--YVGVAVLMGTVVACASVVNGLVIVVSICYKKLRSPLNYILVNLAVADLLVTLCG-SSVS
-LSNNIN-GFFV--FGRRMCELEGFMVSLTGIVGLWSLAILALERYVVVCKPLGD-FQFQR
-RHAVSGCAFTWGWALLW-SAPPLLG-W-----SSYVPEGLRTSCGPNWYTGGSNN--NSY
-ILSLFVTCFVLPLSLILFSYTNLLLTL---------------------------------
-------------------------------------------------------------
-------------------------------RAAAAQQK----------EADTTQRA----
--------------------------EREVTRMVIVMVMAFLLCWLPYSTFALVVATHKGI
-I---IQPVLASLPSYFSKTATVYNPIIYVFMNKQFQSCLLEMLCCGYQ------PQRTGK
-ASPGTPGPHADVTAAGLRNKVMPAHPV---------------------------------
----------------------------------------------------
->    14== M17718   1 D.melanogaster Rh3 <>[J.Neurosci.7,1550-1557'87]
-------------------------------------------------------MESGNV
-SSSLFGNVSTALRPEARLSA---E-----TRLLGWNVPPEELR--HIPEHWLTYPEPPES
-MNYLLGTLYIFFTLMSMLGNGLVIWVFSAAKSLRTPSNILVINLAFCDFMMMVK--TPIF
-IYNSFH-QGYA--LGHLGCQIFGIIGSYTGIAAGATNAFIAYDRFNVITRPMEG--KMTH
-GKAIAMIIFIYMYATPW-VVACYTETW-----GRFVPEGYLTSCTFDYLT--DNFDTRLF
-VACIFFFSFVCPTTMITYYYSQIVGHVFSH------------------------------
-------------------------------------------------------------
------------------------------EKALRDQAKKMNVESLRSNVDKNKETA----
--------------------------EIRIAKAAITICFLFFCSWTPYGVMSLIGAFGDKT
-L---LTPGATMIPACACKMVACIDPFVYAISHPRYRMELQKRCPWLAL---------NEK
-APESSAVASTSTTQEPQQTTAA--------------------------------------
----------------------------------------------------
->    15== X65879   1 Drosophila pseudoobscura Dpse\Rh3 <>[Genetics132(1),193-204'92
-------------------------------------------------------MEYHNV
-SSVL-GNVSSVLRPDARLSA---E-----SRLLGWNVPPDELR--HIPEHWLIYPEPPES
-MNYLLGTLYIFFTVISMIGNGLVMWVFSAAKSLRTPSNILVINLAFCDFMMMIK--TPIF
-IYNSFH-QGYA--LGHLGCQIFGVIGSYTGIAAGATNAFIAYDRYNVITRPMEG--KMTH
-GKAIAMIIFIYLYATPW-VVACYTESW-----GRFVPEGYLTSCTFDYLT--DNFDTRLF
-VACIFFFSFVCPTTMITYYYSQIVGHVFSH------------------------------
-------------------------------------------------------------
------------------------------EKALRDQAKKMNVDSLRSNVDKSKEAA----
--------------------------EIRIAKAAITICFLFFASWTPYGVMSLIGAFGDKT
-L---LTPGATMIPACTCKMVACIDPFVYAISHPRYRMELQKRCPWLAI---------SEK
-APESRAAISTSTTQEQQQTTAA--------------------------------------
----------------------------------------------------
->    16== M17730   1 D.melanogaster Rh4 opsin <>[J.Neurosci.7,1558-1566'87]
-------------------------------------------------------ME----
---PLCNASEPPLRPEAR-SSGNGD-----LQFLGWNVPPDQIQ--YIPEHWLTQLEPPAS
-MHYMLGVFYIFLFCASTVGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDLIMCLK--APIF
---NSFH-RGFAIYLGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNVITKPMNR--NMTF
-TKAVIMNIIIWLYCTPW-VVLPLTQFW-----DRFVPEGYLTSCSFDYLS--DNFDTRLF
-VGTIFFFSFVCPTLMILYYYSQIVGHVFSH------------------------------
-------------------------------------------------------------
------------------------------EKALREQAKKMNVESLRSNVDKSKETA----
--------------------------EIRIAKAAITICFLFFVSWTPYGVMSLIGAFGDKS
-L---LTQGATMIPACTCKLVACIDPFVYAISHPRYRLELQKRCPWLGV---------NEK
-SGEISSAQSTTTQEQ-QQTTAA--------------------------------------
----------------------------------------------------
->    17== X65880   1 Drosophila pseudoobscura Dpse\Rh4 <>[Genetics132(1),193-204'92
-------------------------------------------------------MD----
---ALCNASEPPLRPEARMSSGSDE-----LQFLGWNVPPDQIQ--YIPEHWLTQLEPPAS
-MHYMLGVFYIFLFFASTLGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDLIMCLK--APIF
-IYNSFH-RGFA--LGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNVITKPMNR--NMTF
-TKAVIMNIIIWLYCTPW-VVLPLTQFW-----DRFVPEGYLTSCSFDYLS--DNFDTRLF
-VGTIFLFSFVVPTLMILYYYSQIVGHVFNH------------------------------
-------------------------------------------------------------
------------------------------EKALREQAKKMNVESLRSNVDKSKETA----
--------------------------EIRIAKAAITICFLFFVSWTPYGVMSLIGAFGDKS
-L---LTPGATMIPACTCKLVACIEPFVYAISHPRYRMELQKRCPWLGV---------NEK
-SGEASSAQSTTTQEQTQQTSAA--------------------------------------
----------------------------------------------------
->    18== D50584   1 Hemigrapsus sanguineus opsin BcRh2 <compound eye>[J.Exp.Biol.1
-------------------------------------------------------------
----MTNATGPQMAYYGAASMDFGYPE---GVSIVDFVRPEIKP--YVHQHWYNYPPVNPM
-WHYLLGVIYLFLGTVSIFGNGLVIYLFNKSAALRTPANILVVNLALSDLIMLTTN-VPFF
-TYNCFSGGVWM--FSPQYCEIYACLGAITGVCSIWLLCMISFDRYNIICNGFNG-PKLTT
-GKAVVFALISWVIAIGC-ALPPFFG-W-----GNYILEGILDSCSYDYLT--QDFNTFSY
-NIFIFVFDYFLPAAIIVFSYVFIVKAIFAH------------------------------
-------------------------------------------------------------
------------------------------EAAMRAQAKKMNVSTLRS-NEADAQRA----
--------------------------EIRIAKTALVNVSLWFICWTPYALISLKGVMGDTS
-G---ITPLVSTLPALLAKSCSCYNPFVYAISHPKYRLAITQHLPWFCV------HETETK
-SNDDSQSNSTVAQDKA--------------------------------------------
----------------------------------------------------
->    19== D50583   1 Hemigrapsus sanguineus opsin BcRh1 <compound eye>[J.Exp.Biol.1
-------------------------------------------------------------
----MANVTGPQMAFYGSGAATFGYPE---GMTVADFVPDRVKH--MVLDHWYNYPPVNPM
-WHYLLGVVYLFLGVISIAGNGLVIYLYMKSQALKTPANMLIVNLALSDLIMLTTN-FPPF
-CYNCFSGGRWM--FSGTYCEIYAALGAITGVCSIWTLCMISFDRYNIICNGFNG-PKLTQ
-GKATFMCGLAWVISVGW-SLPPFFG-W-----GSYTLEGILDSCSYDYFT--RDMNTITY
-NICIFIFDFFLPASVIVFSYVFIVKAIFAH------------------------------
-------------------------------------------------------------
------------------------------EAAMRAQAKKMNVTNLRS-NEAETQRA----
--------------------------EIRIAKTALVNVSLWFICWTPYAAITIQGLLGNAE
-G---ITPLLTTLPALLAKSCSCYNPFVYAISHPKFRLAITQHLPWFCV------HEKDPN
-DVEENQSSNTQTQEKS--------------------------------------------
----------------------------------------------------
->    20== K02320   1 D.melanogaster opsin <>[Cell40,851-858'85]
----------------------------------------------------------MES
-FAVAAAQLGPHFA-----PLS--------NGSVVDKVTPDMAH--LISPYWNQFPAMDPI
-WAKILTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-TPMM
-GINLYF-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG-RPMTI
-PLALGKM---------------------------YVPEGNLTSCGIDYLE--RDWNPRSY
-LIFYSIFVYYIPLFLICYSYWFIIAAVSAH------------------------------
-------------------------------------------------------------
------------------------------EKAMREQAKKMNVKSLRS-SEDAEKSA----
--------------------------EGKLAKVALVTITLWFMAWTPYLVINCMGLFKF-E
-G---LTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVF------GKVDDG
-K-SSDAQSQATASEAESKA-----------------------------------------
----------------------------------------------------
->    21== K02315   1 D.melanogaster ninaE <>[Cell40,839-850'85]
----------------------------------------------------------MES
-FAVAAAQLGPHFA-----PLS--------NGSVVDKVTPDMAH--LISPYWNQFPAMDPI
-WAKILTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-TPMM
-GINLYF-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG-RPMTI
-PLALGKIAYIWFMSSIW-CLAPAFG-W-----SRYVPEGNLTSCGIDYLE--RDWNPRSY
-LIFYSIFVYYIPLFLICYSYWFIIAAVSAH------------------------------
-------------------------------------------------------------
------------------------------EKAMREQAKKMNVKSLRS-SEDAEKSA----
--------------------------EGKLAKVALVTITLWFMAWTPYLVINCMGLFKF-E
-G---LTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVF------GKVDDG
-K-SSDAQSQATASEAESKA-----------------------------------------
----------------------------------------------------
->    22== X65877   1 Drosophila pseudoobscura Dpse\ninaE <>[Genetics132(1),193-204'
----------------------------------------------------------MDS
-FAAVATQLGPQFA-----APS--------NGSVVDKVTPDMAH--LISPYWDQFPAMDPI
-WAKILTAYMIIIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-TPMM
-GINLYF-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG-RPMTI
-PLALGKIAYIWFMSTIWCCLAPVFG-W-----SRYVPEGNLTSCGIDYLE--RDWNPRSY
-LIFYSIFVYYIPLFLICYSYWFIIAAVSAH------------------------------
-------------------------------------------------------------
------------------------------EKAMREQAKKMNVKSLRS-SEDADKSA----
--------------------------EGKLAKVALVTISLWFMAWTPYLVINCMGLFKF-E
-G---LTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVF------GKVDDG
-K-SSEAQSQATTSEAESKA-----------------------------------------
----------------------------------------------------
->    23== M12896   1 D.melanogaster Rh2 <>[Cell44,705-710'86]
-----------------------------------------------------MERSHLPE
-TPFDLAHSGPRFQ-----AQSSG------NGSVLDNVLPDMAH--LVNPYWSRFAPMDPM
-MSKILGLFTLAIMIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMASQ-SPVM
-IINFYY-ETWV--LGPLWCDIYAGCGSLFGCVSIWSMCMIAFDRYNVIVKGING-TPMTI
-KTSIMKILFIWMMAVFW-TVMPLIG-W-----SAYVPEGNLTACSIDYMT--RMWNPRSY
-LITYSLFVYYTPLFLICYSYWFIIAAVAAH------------------------------
-------------------------------------------------------------
------------------------------EKAMREQAKKMNVKSLRS-SEDCDKSA----
--------------------------EGKLAKVALTTISLWFMAWTPYLVICYFGLFKI-D
-G---LTPLTTIWGATFAKTSAVYNPIVYGISHPKYRIVLKEKCPMCVF------GNTDEP
-KPDAPASDTETTSEADSKA-----------------------------------------
----------------------------------------------------
->    24== X65878   1 Drosophila pseudoobscura Dpse\Rh2 <>[Genetics132(1),193-204'92
-----------------------------------------------------MERSLLPE
-PPLAMALLGPRFE-----AQTGG------NRSVLDNVLPDMAP--LVNPHWSRFAPMDPT
-MSKILGLFTLVILIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMASQ-SPVM
-IINFYY-ETWV--LGPLWCDIYAACGSLFGCVSIWSMCMIAFDRYNVIVKGING-TPMTI
-KTSIMKIAFIWMMAVFW-TIMPLIG-W-----SSYVPEGNLTACSIDYMT--RQWNPRSY
-LITYSLFVYYTPLFMICYSYWFIIATVAAH------------------------------
-------------------------------------------------------------
------------------------------EKAMRDQAKKMNVKSLRS-SEDCDKSA----
--------------------------ENKLAKVALTTISLWFMAWTPYLIICYFGLFKI-D
-G---LTPLTTIWGATFAKTSAVYNPIVYGISHPNDRLVLKEKCPMCVC------GTTDEP
-KPDAPPSDTETTSEAESKD-----------------------------------------
----------------------------------------------------
->    25== U26026   1 Apis mellifera long-wavelength rhodopsin <>[]
-------------------------------------------------------------
----MIAVSGPSYE-----AFSYGGQARFNNQTVVDKVPPDMLH--LIDANWYQYPPLNPM
-WHGILGFVIGMLGFVSAMGNGMVVYIFLSTKSLRTPSNLFVINLAISNFLMMFCM-SPPM
-VINCYY-ETWV--LGPLFCQIYAMLGSLFGCGSIWTMTMIAFDRYNVIVKGLSG-KPLSI
-NGALIRIIAIWLFSLGW-TIAPMFG-W-----NRYVPEGNMTACGTDYFN--RGLLSASY
-LVCYGIWVYFVPLFLIIYSYWFIIQAVAAH------------------------------
-------------------------------------------------------------
------------------------------EKNMREQAKKMNVASLRS-SENQNTSA----
--------------------------ECKLAKVALMTISLWFMAWTPYLVINFSGIFNL-V
-K---ISPLFTIWGSLFAKANAVYNPIVYGISHPKYRAALFAKFPSLAC-------AAEPS
-SDAVSTTSGTTTVTDNEKSNA---------------------------------------
----------------------------------------------------
->    26== L03781   1 Limulus polyphemus opsin <>[PNAS90,6150-6154'93]
-------------------------------------------------------------
------MANQLSYS-----SLGWPYQP---NASVVDTMPKEMLY--MIHEHWYAFPPMNPL
-WYSILGVAMIILGIICVLGNGMVIYLMMTTKSLRTPTNLLVVNLAFSDFCMMAFM-MPTM
-TSNCFA-ETWI--LGPFMCEVYGMAGSLFGCASIWSMVMITLDRYNVIVRGMAA-APLTH
-KKATLLLLFVWIWSGGW-TILPFFG-W-----SRYVPEGNLTSCTVDYLT--KDWSSASY
-VVIYGLAVYFLPLITMIYCYFFIVHAVAEH------------------------------
-------------------------------------------------------------
------------------------------EKQLREQAKKMNVASLRANADQQKQSA----
--------------------------ECRLAKVAMMTVGLWFMAWTPYLIISWAGVFSSGT
-R---LTPLATIWGSVFAKANSCYNPIVYGISHPRYKAALYQRFPSLAC------GSGESG
-SDVKSEASATTTMEEKPKIPEA--------------------------------------
----------------------------------------------------
->    27== X07797   1 Octopus dofleini rhodopsin <>[FEBS232(1),69-72'88]
-------------------------------------------------------------
-----------MVESTTLVNQTWWY-----NPTVD------------IHPHWAKFDPIPDA
-VYYSVGIFIGVVGIIGILGNGVVIYLFSKTKSLQTPANMFIINLAMSDLSFSAINGFPLK
-TISAFM-KKWI--FGKVACQLYGLLGGIFGFMSINTMAMISIDRYNVIGRPMAASKKMSH
-RRAFLMIIFVWMWSIVW-SVGPVFN-W-----GAYVPEGILTSCSFDYLS--TDPSTRSF
-ILCMYFCGFMLPIIIIAFCYFNIVMSVSNH------------------------------
-------------------------------------------------------------
------------------------------EKEMAAMAKRLNAKELR--KAQAGASA----
--------------------------EMKLAKISMVIITQFMLSWSPYAIIALLAQFGPAE
-W---VTPYAAELPVLFAKASAIHNPIVYSVSHPKFREAIQTTFPWLLTCCQFDEKECEDA
-NDAEEEVVASER--GGESRDAAQMKEMMAMMQKMQAQQAAYQPPPPPQGY--PPQGYPPQ
-GAYPPPQGYPPQGYPPQGYPPQGYPPQGAPPQVEAPQGAPPQGVDNQAYQA
->    28== X70498   1 Todarodes pacificus rhodopsin <retina>[FEBS317(1-2),5-11'93]
-------------------------------------------------------------
------------MGRDLRDNETWWY-----NPSIV------------VHPHWREFDQVPDA
-VYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLM
-TISCFL-KKWI--FGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSH
-RRAFIMIIFVWLWSVLW-AIGPIFG-W-----GAYTLEGVLCNCSFDYIS--RDSTTRSN
-ILCMFILGFFGPILIIFFCYFNIVMSVSNH------------------------------
-------------------------------------------------------------
------------------------------EKEMAAMAKRLNAKELR--KAQAGANA----
--------------------------EMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLE
-W---VTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQFDDKETEDD
-KDAETEIPAGESSDAAPSADAAQMKEMMAMMQKMQQQQAAY----PPQGYAPPPQGYPPQ
-GY--PPQGYPPQGYPPQGYPP---PPQGAPPQ-GAPPAAPPQGVDNQAYQA
->    29== L21195   1 human serotonin 5-HT7 receptor protein <placenta and fetal bra
----------MMDVNSSGRPDLYGHLRSFLLPEVGRGLPDLSPDGGADPVAGSWAPHLLS-
---EVTASPAPTW------------DAPPDNASGCGEQIN-----------------YGRV
-EKVVIGSILTLITLLTIAGNCLVVISVCFVKKLRQPSNYLIVSLALADLSVAVAV-MPFV
-SVTDLIGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNG
-KCMAKMILSVWLLSASI-TLPPLFG-W-----AQNVNDDKVCLISQDF----------GY
-TIYSTAVAFYIPMSVMLFMYYQIYKAAR--------------------------------
-------------------KSAAKHKFPGFPRVEPDSVIAL--------------------
------------------------------NGIVKLQKEVEECANLSRLL-----------
--------------KHERKNISIFKREQKAATTLGIIVGAFTVCWLPFFLLSTARPFICGT
-SCSCIPLWVERTFLWLGYANSLINPFIYAFFNRDLRTTYRSLLQCQYRNINRKLSAAGMH
-EALKLAERPERPEFVLQNADYCRKKGHDS-------------------------------
----------------------------------------------------
->    30== L15228   1 rat 5HT-7 serotonin receptor <>[JBC268,18200-18204'93]
------------------------------------------------------MPHLLSG
-FLEVTASPAPTW------------DAPPDNVSGCGEQIN-----------------YGRV
-EKVVIGSILTLITLLTIAGNCLVVISVSFVKKLRQPSNYLIVSLALADLSVAVAV-MPFV
-SVTDLIGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNG
-KCMAKMILSVWLLSASI-TLPPLFG-W-----AQNVNDDKVCLISQDF----------GY
-TIYSTAVAFYIPMSVMLFMYYQIYKAAR--------------------------------
-------------------KSAAKHKFPGFPRVQPESVISL--------------------
------------------------------NGVVKLQKEVEECANLSRLL-----------
--------------KHERKNISIFKREQKAATTLGIIVGAFTVCWLPFFLLSTARPFICGT
-SCSCIPLWVERTCLWLGYANSLINPFIYAFFNRDLRPTSRSLLQCQYRNINRKLSAAGMH
-EALKLAERPERSEFVLQNSDHCGKKGHDT-------------------------------
----------------------------------------------------
->    31=p A47425 serotonin receptor 5HT-7 - rat
------------------------------------------------------MPHLLSG
-FLEVTASPAPTW------------DAPPDNVSGCGEQIN-----------------YGRV
-EKVVIGSILTLITLLTIAGNCLVVISVSFVKKLRQPSNYLIVSLALADLSVAVAV-MPFV
-SVTDLIGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNG
-KCMAKMILSVWLLSASI-TLPPLFG-W-----AQNVNDDKVCLISQDF----------GY
-TIYSTAVAFYIPMSVMLFMYYQIYKAAR--------------------------------
-------------------KSAAKHKFPGFPRVQPESVISL--------------------
------------------------------NGVVKLQKEVEECANLSRLL-----------
--------------KHERKNISIFKREQKAATTLGIIVGAFTVCWLPFFLLSTARPFICGT
-SCSCIPLWVERTCLWLGYANSLINPFIYAFFNRDLRTTYRSLLQCQYRNINRKLSAAGMH
-EALKLAERPERSEFVLQNSDHCGKKGHDT-------------------------------
----------------------------------------------------
->    32== M83181   1 human serotonin receptor <>[JBC267(11),7553-7562'92]
-----------MDVLSPGQ-------GN----------------------NTTSPPAPFET
-GGNTTGISDVTV-----------------------------------------------S
-YQVITSLLLGTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLV-LPMA
-ALYQVL-NKWT--LGQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVNKRTP
-RRAAALISLTWLIGFLI-SIPPMLG-WRTPEDRSDPDA---CTISKDH----------GY
-TIYSTFGAFYIPLLLMLVLYGRIFRAARFRIRK---------------------------
-------------TVKKVEKTGADTRHGASPAPQPKKS-----------VNGESGSR----
------NWRLGVESKAGGALCANGAVRQGDDGAALEVIEVHRVGNSKEHLPLPSEAG--PT
-PCAPASFERKNERNAEAKRKMALARERKTVKTLGIIMGTFILCWLPFFIVALVLPF-CES
-SCH-MPTLLGAIINWLGYSNSLLNPVIYAYFNKDFQNAFKKIIKCKFCRQ----------
-------------------------------------------------------------
----------------------------------------------------
->    33=p A35181 serotonin receptor class 1A - rat
-----------MDVFSFGQ-------GN----------------------NTTASQEPFGT
-GGNVTSISDVTF-----------------------------------------------S
-YQVITSLLLGTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLV-LPMA
-ALYQVL-NKWT--LGQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVNKRTP
-RRAAALISLTWLIGFLI-SIPPMLG-WRTPEDRSDPDA---CTISKDH----------GY
-TIYSTFGAFYIPLLLMLVLYGRIFRAARFRIRK---------------------------
-------------TVRKVEKKGAGTSLGTSSAPPPKKS-----------LNGQPGSG----
------DWRRCAENRAVGTPCTNGAVRQGDDEATLEVIEVHRVGNSKEHLPLPSESG--SN
-SYAPACLERKNERNAEAKRKMALARERKTVKTLGIIMGTFILCWLPFFIVALVLPF-CES
-SCH-MPALLGAIINWLGYSNSLLNPVIYAYFNKDFQNAFKKIIKCKFCRR----------
-------------------------------------------------------------
----------------------------------------------------
->    34== L06803   1 Lymnaea stagnalis serotonin receptor <>[PNAS90,11-15'93]
-MANFTFGDLALDVARMGGLASTPSGLR----------------------STGLTTPGLSP
-TGLVTSDFNDSYGLTGQFINGSHSSRSRDNASANDTSATN-----MTDDRYWSLTVYSHE
-HLVLTSVILGLFVLCCIIGNCFVIAAVMLERSLHNVANYLILSLAVADLMVAVLV-MPLS
-VVSEIS-KVWF--LHSEVCDMWISVDVLCCTASILHLVAIAMDRYWAVTS-IDYIRRRSA
-RRILLMIMVVWIVALFI-SIPPLFG-WRDP--NNDPDKTGTCIISQDK----------GY
-TIFSTVGAFYLPMLVMMIIYIRIWLVARSRIRKDKFQMTKARLKTEETTLVASPKTEYSV
-VSDCNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKKNRAKKLPENANGVNSNSSS-----
------SERLKQIQIETAEAFANGCA----EEASIAMLERQ-CNNGKKISSNDTPYS----
----------RTREKLELK------RERKAARTLAIITGAFLICWLPFFIIALIGPF-VDP
-E-G-IPPFARSFVLWLGYFNSLLNPIIYTIFSPEFRSAFQKILFGKYRRGHR--------
-------------------------------------------------------------
----------------------------------------------------
->    35=p A47174 serotonin receptor, 5HTlym receptor - great pond snail
-MANFTFGDLALDVARMGGLASTPSGLR----------------------STGLTTPGLSP
-TGLVTSDFNDSYGLTGQFINGSHSSRSRDNASANDTSATN-----MTDDRYWSLTVYSHE
-HLVLTSVILGLFVLCCIIGNCFVIAAVMLERSLHNVANYLILSLAVADLMVAVLV-MPLS
-VVSEIS-KVWF--LHSEVCDMWISVDVLCCTASILHLVAIAMDRYWAVTS-IDYIRRRSA
-RRILLMIMVVWIVALFI-SIPPLFG-WRDP--NNDPDKTGTCIISQDK----------GY
-TIFSTVGAFYLPMLVMMIIYIRIWLVARSRIRKDKFQMTKARLKTEETTLVASPKTEYSV
-VSDCNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKKNRAKKLPENANGVNSNSSS-----
------SERLKQIQIETAEAFANGCA----EEASIAMLERQ-CNNGKKISSNDTPYS----
----------RTREKLELK------RERKAARTLAIITGAFLICWLPFFIIALIGPF-VDP
-E-G-IPPFARSFVLWLGYFNSLLNPIIYTIFSPEFRSAFQKILFGKYRRGHR--------
-------------------------------------------------------------
----------------------------------------------------
->    36== X95604   1 Bombyx mori serotonin receptor <antennae>[InsectBiochem.Mol.Bi
--MEGAEGQEELDWEAL--YLRLP--LQ----------------------NCSWNSTGWEP
-NWNVTVVPNTTW---------WQASAPFDTPAALVRAAAK--------------------
------AVVLGLLILATVVGNVFVIAAILLERHLRSAANNLILSLAVADLLVACLV-MPLG
-AVYEVV-QRWT--LGPELCDMWTSGDVLCCTASILHLVAIALDRYWAVTN-IDYIHASTA
-KRVGMMIACVWTVSFFV-CIAQLLG-WKDPDWNQRVSEDLRCVVSQDV----------GY
-QIFATASSFYVPVLIILILYWRIYQTARKRIR----------------------------
------------------RRRGATARGGVGPPP---------VPAGGALVAGGGSGGIAAA
-VVAVIGRPLPTISETTTTGFTNVSS----NNTS---PEKQSCANGLEADPPTTGYGAVAA
-AYYPSLVRRKPKEAADSK------RERKAAKTLAIITGAFVACWLPFFVLAILVPT-CDC
-E---VSPVLTSLSLWLGYFNSTLNPVIYTVFSPEFRHAFQRLLCGRRVRRRRAPQ-----
-------------------------------------------------------------
----------------------------------------------------