Delete unneeded directory
[jabaws.git] / website / archive / binaries / mac / src / mafft / test / sample.fftnsi
diff --git a/website/archive/binaries/mac/src/mafft/test/sample.fftnsi b/website/archive/binaries/mac/src/mafft/test/sample.fftnsi
deleted file mode 100644 (file)
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->     1== M63632   1 Lampetra japonica rhodopsin <>[BBRC174,1125-1132'91]
-------------------------------------------------------------
----------MNGTE--GDNFYVP----FSNKTGLARSPYEYPQYYLAEPWK---------
-YSALAAYMFFLILVGFPVNFLTLFVTVQHKKLRTPLNYILLNLAMANLFMVLFG-FTVTM
-YTSMN-GYFV--FGPTMCSIEGFFATLGGEVALWSLVVLAIERYIVICKPMGN-FRFGNT
-HAIMGVAFTWIMALAC-AAPPLVG-W-----SRYIPEGMQCSCGPDYYTLNPNFNNESYV
-VYMFVVHFLVPFVIIFFCYGRLLCTV----------------------------------
-------------------------------------------------------------
--------------------KEAAAAQQ-----------------------------ESAS
-TQKA----------EKEVTRMVVLMVIGFLVCWVPYASVAFYIFT---HQGSD-FGATFM
-TLPAFFAKSSALYNPVIYILMNKQFRNCMITTLCCGKN------PLGDDE--SGASTSKT
-EVSSVS-TSPVSPA----------------------------------------------
------------------------------------------
->     2== U22180   1 rat opsin <rod>[J.Mol.Neurosci.5(3),207-209'94]
-------------------------------------------------------------
----------MNGTE--GPNFYVP----FSNITGVVRSPFEQPQYYLAEPWQ---------
-FSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGG-FTTTL
-YTSLH-GYFV--FGPTGCNLEGFFATLGGEIGLWSLVVLAIERYVVVCKPMSN-FRFGEN
-HAIMGVAFTWVMALAC-AAPPLVG-W-----SRYIPEGMQCSCGIDYYTLKPEVNNESFV
-IYMFVVHFTIPMIVIFFCYGQLVFTV----------------------------------
-------------------------------------------------------------
--------------------KEAAAQQQ-----------------------------ESAT
-TQKA----------EKEVTRMVIIMVIFFLICWLPYASVAMYIFT---HQGSN-FGPIFM
-TLPAFFAKTASIYNPIIYIMMNKQFRNCMLTSLCCGKN------PLGDDE--ASATASKT
-ETSQ------VAPA----------------------------------------------
------------------------------------------
->     3== M92038   1 chicken green sensitive cone opsin <retina>[PNAS89,5932-5936'9
-------------------------------------------------------------
----------MNGTE--GINFYVP----MSNKTGVVRSPFEYPQYYLAEPWK---------
-YRLVCCYIFFLISTGLPINLLTLLVTFKHKKLRQPLNYILVNLAVADLFMACFG-FTVTF
-YTAWN-GYFV--FGPVGCAVEGFFATLGGQVALWSLVVLAIERYIVVCKPMGN-FRFSAT
-HAMMGIAFTWVMAFSC-AAPPLFG-W-----SRYMPEGMQCSCGPDYYTHNPDYHNESYV
-LYMFVIHFIIPVVVIFFSYGRLICKV----------------------------------
-------------------------------------------------------------
--------------------REAAAQQQ-----------------------------ESAT
-TQKA----------EKEVTRMVILMVLGFMLAWTPYAVVAFWIFT---NKGAD-FTATLM
-AVPAFFSKSSSLYNPIIYVLMNKQFRNCMITTICCGKN------PFGDEDVSSTVSQSKT
-EVSSVS-SSQVSPA----------------------------------------------
------------------------------------------
->     4=p A45229 opsin, green-sensitive (clone GFgr-1) - goldfish
-------------------------------------------------------------
----------MNGTE--GKNFYVP----MSNRTGLVRSPFEYPQYYLAEPWQ---------
-FKILALYLFFLMSMGLPINGLTLVVTAQHKKLRQPLNFILVNLAVAGTIMVCFG-FTVTF
-YTAIN-GYFV--LGPTGCAVEGFMATLGGEVALWSLVVLAIERYIVVCKPMGS-FKFSSS
-HAFAGIAFTWVMALAC-AAPPLFG-W-----SRYIPEGMQCSCGPDYYTLNPDYNNESYV
-IYMFVCHFILPVAVIFFTYGRLVCTV----------------------------------
-------------------------------------------------------------
--------------------KAAAAQQQ-----------------------------DSAS
-TQKA----------EREVTKMVILMVFGFLIAWTPYATVAAWIFF---NKGAD-FSAKFM
-AIPAFFSKSSALYNPVIYVLLNKQFRNCMLTTIFCGKN------PLGDDE-SSTVSTSKT
-EVSS------VSPA----------------------------------------------
------------------------------------------
->     5=p B45229 opsin, green-sensitive (clone GFgr-2) - goldfish
-------------------------------------------------------------
----------MNGTE--GNNFYVP----LSNRTGLVRSPFEYPQYYLAEPWQ---------
-FKLLAVYMFFLICLGLPINGLTLICTAQHKKLRQPLNFILVNLAVAGAIMVCFG-FTVTF
-YTAIN-GYFA--LGPTGCAVEGFMATLGGEVALWSLVVLAIERYIVVCKPMGS-FKFSST
-HASAGIAFTWVMAMAC-AAPPLVG-W-----SRYIPEGIQCSCGPDYYTLNPEYNNESYV
-LYMFICHFILPVTIIFFTYGRLVCTV----------------------------------
-------------------------------------------------------------
--------------------KAAAAQQQ-----------------------------DSAS
-TQKA----------EREVTKMVILMVLGFLVAWTPYATVAAWIFF---NKGAA-FSAQFM
-AIPAFFSKTSALYNPVIYVLLNKQFRSCMLTTLFCGKN------PLGDEE-SSTVSTSKT
-EVSS------VSPA----------------------------------------------
------------------------------------------
->     6== L11864   1 Carassius auratus blue cone opsin <retina>[Biochemistry32,208-
-------------------------------------------------------------
----------MKQVPEFHEDFYIPIPLDINNLS--AYSPFLVPQDHLGNQGI---------
-FMAMSVFMFFIFIGGASINILTILCTIQFKKLRSHLNYILVNLSIANLFVAIFG-SPLSF
-YSFFN-RYFI--FGATACKIEGFLATLGGMVGLWSLAVVAFERWLVICKPLGN-FTFKTP
-HAIAGCILPWISALAA-SLPPLFG-W-----SRYIPEGLQCSCGPDWYTTNNKYNNESYV
-MFLFCFCFAVPFGTIVFCYGQLLITL----------------------------------
-------------------------------------------------------------
--------------------KLAAKAQA-----------------------------DSAS
-TQKA----------EREVTKMVVVMVLGFLVCWAPYASFSLWIVS---HRGEE-FDLRMA
-TIPSCLSKASTVYNPVIYVLMNKQFRSCMM-KMVCGKN-------IEEDE--ASTSSQVT
-QVSS------VAPEK---------------------------------------------
------------------------------------------
->     7== M13299   1 human BCP <>[Science232(4747),193-202'86]
-------------------------------------------------------------
----------MRKMS--EEEFYL-----FKNISSV--GPWDGPQYHIAPVWA---------
-FYLQAAFMGTVFLIGFPLNAMVLVATLRYKKLRQPLNYILVNVSFGGFLLCIFS-VFPVF
-VASCN-GYFV--FGRHVCALEGFLGTVAGLVTGWSLAFLAFERYIVICKPFGN-FRFSSK
-HALTVVLATWTIGIGV-SIPPFFG-W-----SRFIPEGLQCSCGPDWYTVGTKYRSESYT
-WFLFIFCFIVPLSLICFSYTQLLRAL----------------------------------
-------------------------------------------------------------
--------------------KAVAAQQQ-----------------------------ESAT
-TQKA----------EREVSRMVVVMVGSFCVCYVPYAAFAMYMVN---NRNHG-LDLRLV
-TIPSFFSKSACIYNPIIYCFMNKQFQACIM-KMVCGKA-------MTDES--DTCSSQKT
-EVSTVS-STQVGPN----------------------------------------------
------------------------------------------
->     8=opsin, greensensitive  human (fragment) S07060
-------------------------------------------------------------
-------------------------------------------------------------
-----------------------------------------------DLAETVIA-STISI
-VNQVS-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGN-VRFDAK
-LAIVGIAFSWIWAAVW-TAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSSYPGVQSYM
-IVLMVTCCITPLSIIVLCYLQVWLAI----------------------------------
-------------------------------------------------------------
--------------------RAVAKQQK-----------------------------ESES
-TQKA----------EKEVTRMVVVMVLAFC------------------------------
-------------------------------------------------------------
-------------------------------------------------------------
------------------------------------------
->     9== K03494   1 human GCP <>[Science232(4747),193-202'86]
-----------------------------------------------------------MA
-QQWSLQRLAGRHPQDSYEDSTQSSIFTYTNSNS-TRGPFEGPNYHIAPRWV---------
-YHLTSVWMIFVVIASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIA-STISV
-VNQVY-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWMVVCKPFGN-VRFDAK
-LAIVGIAFSWIWAAVW-TAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSSYPGVQSYM
-IVLMVTCCITPLSIIVLCYLQVWLAI----------------------------------
-------------------------------------------------------------
--------------------RAVAKQQK-----------------------------ESES
-TQKA----------EKEVTRMVVVMVLAFCFCWGPYAFFACFAAA---NPGYP-FHPLMA
-ALPAFFAKSATIYNPVIYVFMNRQFRNCILQLF-----------GKKVDDGSELSSASKT
-EVSSV---SSVSPA----------------------------------------------
------------------------------------------
->    10== Z68193   1 human Red Opsin <>[]
-----------------------------------------------------------MA
-QQWSLQRLAGRHPQDSYEDSTQSSIFTYTNSNS-TRGPFEGPNYHIAPRWV---------
-YHLTSVWMIFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIA-STISI
-VNQVS-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGN-VRFDAK
-LAIVGIAFSWIWSAVW-TAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSSYPGVQSYM
-IVLMVTCCIIPLAIIMLCYLQVWLAI----------------------------------
-------------------------------------------------------------
--------------------RAVAKQQK-----------------------------ESES
-TQKA----------EKEVTRMVVVMIFAYCVCWGPYTFFACFAAA---NPGYA-FHPLMA
-ALPAYFAKSATIYNPVIYVFMNRQFRNCILQLF-----------GKKVDDGSELSSASKT
-EVSSV---SSVSPA----------------------------------------------
------------------------------------------
->    11== M92036   1 Gecko gecko P521 <retina>[PNAS89,6841-6845'92]
-----------------------------------------------------------MT
-EAWNVAVFAARRSRD-DDDTTRGSVFTYTNTNN-TRGPFEGPNYHIAPRWV---------
-YNLVSFFMIIVVIASCFTNGLVLVATAKFKKLRHPLNWILVNLAFVDLVETLVA-STISV
-FNQIF-GYFI--LGHPLCVIEGYVVSSCGITGLWSLAIISWERWFVVCKPFGN-IKFDSK
-LAIIGIVFSWVWAWGW-SAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSVELGCQSFM
-LTLMITCCFLPLFIIIVCYLQVWMAI----------------------------------
-------------------------------------------------------------
--------------------RAVAAQQK-----------------------------ESES
-TQKA----------EREVSRMVVVMIVAFCICWGPYASFVSFAAA---NPGYA-FHPLAA
-ALPAYFAKSATIYNPVIYVFMNRQFRNCIMQLF-----------GKKVDDGSEASTTSRT
-EVSSVS-NSSVAPA----------------------------------------------
------------------------------------------
->    12== M62903   1 chicken visual pigment <>[BBRC173,1212-1217'90]
------------------------------------------------------------M
-AAWEAAFAARRRHE--EEDTTRDSVFTYTNSNN-TRGPFEGPNYHIAPRWV---------
-YNLTSVWMIFVVAASVFTNGLVLVATWKFKKLRHPLNWILVNLAVADLGETVIA-STISV
-INQIS-GYFI--LGHPMCVVEGYTVSACGITALWSLAIISWERWFVVCKPFGN-IKFDGK
-LAVAGILFSWLWSCAW-TAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSSDPGVQSYM
-VVLMVTCCFFPLAIIILCYLQVWLAI----------------------------------
-------------------------------------------------------------
--------------------RAVAAQQK-----------------------------ESES
-TQKA----------EKEVSRMVVVMIVAYCFCWGPYTFFACFAAA---NPGYA-FHPLAA
-ALPAYFAKSATIYNPIIYVFMNRQFRNCILQLF-----------GKKVDDGSEVST-SRT
-EVSSVS-NSSVSPA----------------------------------------------
------------------------------------------
->    13== S75720   1 chicken P-opsin <>[Science267(5203),1502-1506'95]
-------------------------------------------------------------
-----------------------------MSSNSSQAPPNGTPGPFDGPQWP--YQAPQST
-YVGVAVLMGTVVACASVVNGLVIVVSICYKKLRSPLNYILVNLAVADLLVTLCG-SSVSL
-SNNIN-GFFV--FGRRMCELEGFMVSLTGIVGLWSLAILALERYVVVCKPLGD-FQFQRR
-HAVSGCAFTWGWALLW-SAPPLLG-W-----SSYVPEGLRTSCGPNWYTGGS--NNNSYI
-LSLFVTCFVLPLSLILFSYTNLLLTL----------------------------------
-------------------------------------------------------------
--------------------RAAAAQQK-----------------------------EADT
-TQRA----------EREVTRMVIVMVMAFLLCWLPYSTFALVVAT---HKGII-IQPVLA
-SLPSYFSKTATVYNPIIYVFMNKQFQSCLLEMLCCGYQ------PQRTGKASPGTPGPHA
-DVTAAGLRNKVMPAHPV-------------------------------------------
------------------------------------------
->    14== M17718   1 D.melanogaster Rh3 <>[J.Neurosci.7,1550-1557'87]
-------------------------------------------------------MESGNV
-SSSLFGNVSTALRPEARLSAE--------TRLLGWNVPPEELR-HIPEHWLTYPEPPESM
-NYLLGTLYIFFTLMSMLGNGLVIWVFSAAKSLRTPSNILVINLAFCDFMMMVK--TPIFI
-YNSFH-QGYA--LGHLGCQIFGIIGSYTGIAAGATNAFIAYDRFNVITRPMEG--KMTHG
-KAIAMIIFIYMYATPW-VVACYTETW-----GRFVPEGYLTSCTFDYLT--DNFDTRLFV
-ACIFFFSFVCPTTMITYYYSQIVGHVFSH-------------------------------
-------------------------------------------------------------
-------------------EKALRDQAKKMNVESLRS-------------------NVDKN
-KETA----------EIRIAKAAITICFLFFCSWTPYGVMSLIGAF---GDKTL-LTPGAT
-MIPACACKMVACIDPFVYAISHPRYRMELQKRCPWLAL---------NEKAPESSAVAST
-STTQEPQQTTAA------------------------------------------------
------------------------------------------
->    15== X65879   1 Drosophila pseudoobscura Dpse\Rh3 <>[Genetics132(1),193-204'92
-------------------------------------------------------MEYHNV
-S-SVLGNVSSVLRPDARLSAE--------SRLLGWNVPPDELR-HIPEHWLIYPEPPESM
-NYLLGTLYIFFTVISMIGNGLVMWVFSAAKSLRTPSNILVINLAFCDFMMMIK--TPIFI
-YNSFH-QGYA--LGHLGCQIFGVIGSYTGIAAGATNAFIAYDRYNVITRPMEG--KMTHG
-KAIAMIIFIYLYATPW-VVACYTESW-----GRFVPEGYLTSCTFDYLT--DNFDTRLFV
-ACIFFFSFVCPTTMITYYYSQIVGHVFSH-------------------------------
-------------------------------------------------------------
-------------------EKALRDQAKKMNVDSLRS-------------------NVDKS
-KEAA----------EIRIAKAAITICFLFFASWTPYGVMSLIGAF---GDKTL-LTPGAT
-MIPACTCKMVACIDPFVYAISHPRYRMELQKRCPWLAI---------SEKAPESRAAIST
-STTQEQQQTTAA------------------------------------------------
------------------------------------------
->    16== M17730   1 D.melanogaster Rh4 opsin <>[J.Neurosci.7,1558-1566'87]
-------------------------------------------------------ME----
---PLCNASEPPLRPEARSSGNGD------LQFLGWNVPPDQIQ-YIPEHWLTQLEPPASM
-HYMLGVFYIFLFCASTVGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDLIMCLK--APIF-
--NSFH-RGFAIYLGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNVITKPMNR--NMTFT
-KAVIMNIIIWLYCTPW-VVLPLTQFW-----DRFVPEGYLTSCSFDYLS--DNFDTRLFV
-GTIFFFSFVCPTLMILYYYSQIVGHVFSH-------------------------------
-------------------------------------------------------------
-------------------EKALREQAKKMNVESLRS-------------------NVDKS
-KETA----------EIRIAKAAITICFLFFVSWTPYGVMSLIGAF---GDKSL-LTQGAT
-MIPACTCKLVACIDPFVYAISHPRYRLELQKRCPWLGV---------NEKSGEISSAQST
-TTQEQ-QQTTAA------------------------------------------------
------------------------------------------
->    17== X65880   1 Drosophila pseudoobscura Dpse\Rh4 <>[Genetics132(1),193-204'92
-------------------------------------------------------MD----
---ALCNASEPPLRPEARMSSGSDE-----LQFLGWNVPPDQIQ-YIPEHWLTQLEPPASM
-HYMLGVFYIFLFFASTLGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDLIMCLK--APIFI
-YNSFH-RGFA--LGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNVITKPMNR--NMTFT
-KAVIMNIIIWLYCTPW-VVLPLTQFW-----DRFVPEGYLTSCSFDYLS--DNFDTRLFV
-GTIFLFSFVVPTLMILYYYSQIVGHVFNH-------------------------------
-------------------------------------------------------------
-------------------EKALREQAKKMNVESLRS-------------------NVDKS
-KETA----------EIRIAKAAITICFLFFVSWTPYGVMSLIGAF---GDKSL-LTPGAT
-MIPACTCKLVACIEPFVYAISHPRYRMELQKRCPWLGV---------NEKSGEASSAQST
-TTQEQTQQTSAA------------------------------------------------
------------------------------------------
->    18== D50584   1 Hemigrapsus sanguineus opsin BcRh2 <compound eye>[J.Exp.Biol.1
-------------------------------------------------------------
----MTNATGPQMAYYGAASMDFGYPE---GVSIVDFVRPEIKP-YVHQHWYNYPPVNPMW
-HYLLGVIYLFLGTVSIFGNGLVIYLFNKSAALRTPANILVVNLALSDLIMLTTN-VPFFT
-YNCFSGGVWM--FSPQYCEIYACLGAITGVCSIWLLCMISFDRYNIICNGFNG-PKLTTG
-KAVVFALISWVIAIGC-ALPPFFG-W-----GNYILEGILDSCSYDYLT--QDFNTFSYN
-IFIFVFDYFLPAAIIVFSYVFIVKAIFAH-------------------------------
-------------------------------------------------------------
-------------------EAAMRAQAKKMNVSTLRS--------------------NEAD
-AQRA----------EIRIAKTALVNVSLWFICWTPYALISLKGVM---GDTSG-ITPLVS
-TLPALLAKSCSCYNPFVYAISHPKYRLAITQHLPWFCV------HETETKSNDDSQSNST
-VAQDKA------------------------------------------------------
------------------------------------------
->    19== D50583   1 Hemigrapsus sanguineus opsin BcRh1 <compound eye>[J.Exp.Biol.1
-------------------------------------------------------------
----MANVTGPQMAFYGSGAATFGYPE---GMTVADFVPDRVKH-MVLDHWYNYPPVNPMW
-HYLLGVVYLFLGVISIAGNGLVIYLYMKSQALKTPANMLIVNLALSDLIMLTTN-FPPFC
-YNCFSGGRWM--FSGTYCEIYAALGAITGVCSIWTLCMISFDRYNIICNGFNG-PKLTQG
-KATFMCGLAWVISVGW-SLPPFFG-W-----GSYTLEGILDSCSYDYFT--RDMNTITYN
-ICIFIFDFFLPASVIVFSYVFIVKAIFAH-------------------------------
-------------------------------------------------------------
-------------------EAAMRAQAKKMNVTNLRS--------------------NEAE
-TQRA----------EIRIAKTALVNVSLWFICWTPYAAITIQGLL---GNAEG-ITPLLT
-TLPALLAKSCSCYNPFVYAISHPKFRLAITQHLPWFCV------HEKDPNDVEENQSSNT
-QTQEKS------------------------------------------------------
------------------------------------------
->    20== K02320   1 D.melanogaster opsin <>[Cell40,851-858'85]
----------------------------------------------------------MES
-FAVAAAQLGPHFA-----PLS--------NGSVVDKVTPDMAH-LISPYWNQFPAMDPIW
-AKILTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-TPMMG
-INLYF-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG-RPMTIP
-LALGKM---------------------------YVPEGNLTSCGIDYLE--RDWNPRSYL
-IFYSIFVYYIPLFLICYSYWFIIAAVSAH-------------------------------
-------------------------------------------------------------
-------------------EKAMREQAKKMNVKSLRS--------------------SEDA
-EKSA----------EGKLAKVALVTITLWFMAWTPYLVINCMGLF---KF-EG-LTPLNT
-IWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVF------GKVDDGK-SSDAQSQA
-TASEAESKA---------------------------------------------------
------------------------------------------
->    21== K02315   1 D.melanogaster ninaE <>[Cell40,839-850'85]
----------------------------------------------------------MES
-FAVAAAQLGPHFA-----PLS--------NGSVVDKVTPDMAH-LISPYWNQFPAMDPIW
-AKILTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-TPMMG
-INLYF-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG-RPMTIP
-LALGKIAYIWFMSSIW-CLAPAFG-W-----SRYVPEGNLTSCGIDYLE--RDWNPRSYL
-IFYSIFVYYIPLFLICYSYWFIIAAVSAH-------------------------------
-------------------------------------------------------------
-------------------EKAMREQAKKMNVKSLRS--------------------SEDA
-EKSA----------EGKLAKVALVTITLWFMAWTPYLVINCMGLF---KF-EG-LTPLNT
-IWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVF------GKVDDGK-SSDAQSQA
-TASEAESKA---------------------------------------------------
------------------------------------------
->    22== X65877   1 Drosophila pseudoobscura Dpse\ninaE <>[Genetics132(1),193-204'
----------------------------------------------------------MDS
-FAAVATQLGPQFA-----APS--------NGSVVDKVTPDMAH-LISPYWDQFPAMDPIW
-AKILTAYMIIIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-TPMMG
-INLYF-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG-RPMTIP
-LALGKIAYIWFMSTIWCCLAPVFG-W-----SRYVPEGNLTSCGIDYLE--RDWNPRSYL
-IFYSIFVYYIPLFLICYSYWFIIAAVSAH-------------------------------
-------------------------------------------------------------
-------------------EKAMREQAKKMNVKSLRS--------------------SEDA
-DKSA----------EGKLAKVALVTISLWFMAWTPYLVINCMGLF---KF-EG-LTPLNT
-IWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVF------GKVDDGK-SSEAQSQA
-TTSEAESKA---------------------------------------------------
------------------------------------------
->    23== M12896   1 D.melanogaster Rh2 <>[Cell44,705-710'86]
-----------------------------------------------------MERSHLPE
-TPFDLAHSGPRFQ-----AQSSG------NGSVLDNVLPDMAH-LVNPYWSRFAPMDPMM
-SKILGLFTLAIMIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMASQ-SPVMI
-INFYY-ETWV--LGPLWCDIYAGCGSLFGCVSIWSMCMIAFDRYNVIVKGING-TPMTIK
-TSIMKILFIWMMAVFW-TVMPLIG-W-----SAYVPEGNLTACSIDYMT--RMWNPRSYL
-ITYSLFVYYTPLFLICYSYWFIIAAVAAH-------------------------------
-------------------------------------------------------------
-------------------EKAMREQAKKMNVKSLRS--------------------SEDC
-DKSA----------EGKLAKVALTTISLWFMAWTPYLVICYFGLF---KI-DG-LTPLTT
-IWGATFAKTSAVYNPIVYGISHPKYRIVLKEKCPMCVF------GNTDEPKPDAPASDTE
-TTSEADSKA---------------------------------------------------
------------------------------------------
->    24== X65878   1 Drosophila pseudoobscura Dpse\Rh2 <>[Genetics132(1),193-204'92
-----------------------------------------------------MERSLLPE
-PPLAMALLGPRFE-----AQTGG------NRSVLDNVLPDMAP-LVNPHWSRFAPMDPTM
-SKILGLFTLVILIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMASQ-SPVMI
-INFYY-ETWV--LGPLWCDIYAACGSLFGCVSIWSMCMIAFDRYNVIVKGING-TPMTIK
-TSIMKIAFIWMMAVFW-TIMPLIG-W-----SSYVPEGNLTACSIDYMT--RQWNPRSYL
-ITYSLFVYYTPLFMICYSYWFIIATVAAH-------------------------------
-------------------------------------------------------------
-------------------EKAMRDQAKKMNVKSLRS--------------------SEDC
-DKSA----------ENKLAKVALTTISLWFMAWTPYLIICYFGLF---KI-DG-LTPLTT
-IWGATFAKTSAVYNPIVYGISHPNDRLVLKEKCPMCVC------GTTDEPKPDAPPSDTE
-TTSEAESKD---------------------------------------------------
------------------------------------------
->    25== U26026   1 Apis mellifera long-wavelength rhodopsin <>[]
-------------------------------------------------------------
----MIAVSGPSYE-----AFSYGGQARFNNQTVVDKVPPDMLH-LIDANWYQYPPLNPMW
-HGILGFVIGMLGFVSAMGNGMVVYIFLSTKSLRTPSNLFVINLAISNFLMMFCM-SPPMV
-INCYY-ETWV--LGPLFCQIYAMLGSLFGCGSIWTMTMIAFDRYNVIVKGLSG-KPLSIN
-GALIRIIAIWLFSLGW-TIAPMFG-W-----NRYVPEGNMTACGTDYFN--RGLLSASYL
-VCYGIWVYFVPLFLIIYSYWFIIQAVAAH-------------------------------
-------------------------------------------------------------
-------------------EKNMREQAKKMNVASLRS--------------------SENQ
-NTSA----------ECKLAKVALMTISLWFMAWTPYLVINFSGIF---NL-VK-ISPLFT
-IWGSLFAKANAVYNPIVYGISHPKYRAALFAKFPSLAC-------AAEPSSDAVSTTSGT
-TTVTDNEKSNA-------------------------------------------------
------------------------------------------
->    26== L03781   1 Limulus polyphemus opsin <>[PNAS90,6150-6154'93]
-------------------------------------------------------------
------MANQLSYS-----SLGWPYQP---NASVVDTMPKEMLY-MIHEHWYAFPPMNPLW
-YSILGVAMIILGIICVLGNGMVIYLMMTTKSLRTPTNLLVVNLAFSDFCMMAFM-MPTMT
-SNCFA-ETWI--LGPFMCEVYGMAGSLFGCASIWSMVMITLDRYNVIVRGMAA-APLTHK
-KATLLLLFVWIWSGGW-TILPFFG-W-----SRYVPEGNLTSCTVDYLT--KDWSSASYV
-VIYGLAVYFLPLITMIYCYFFIVHAVAEH-------------------------------
-------------------------------------------------------------
-------------------EKQLREQAKKMNVASLRA-------------------NADQQ
-KQSA----------ECRLAKVAMMTVGLWFMAWTPYLIISWAGVF---SSGTR-LTPLAT
-IWGSVFAKANSCYNPIVYGISHPRYKAALYQRFPSLAC------GSGESGSDVKSEASAT
-TTMEEKPKIPEA------------------------------------------------
------------------------------------------
->    27== X07797   1 Octopus dofleini rhodopsin <>[FEBS232(1),69-72'88]
-------------------------------------------------------------
-----------MVESTTLVNQTWWY-----NPTVD-----------IHPHWAKFDPIPDAV
-YYSVGIFIGVVGIIGILGNGVVIYLFSKTKSLQTPANMFIINLAMSDLSFSAINGFPLKT
-ISAFM-KKWI--FGKVACQLYGLLGGIFGFMSINTMAMISIDRYNVIGRPMAASKKMSHR
-RAFLMIIFVWMWSIVW-SVGPVFN-W-----GAYVPEGILTSCSFDYLS--TDPSTRSFI
-LCMYFCGFMLPIIIIAFCYFNIVMSVSNH-------------------------------
-------------------------------------------------------------
-------------------EKEMAAMAKRLNAKELR---------------------KAQA
-GASA----------EMKLAKISMVIITQFMLSWSPYAIIALLAQF---GPAEW-VTPYAA
-ELPVLFAKASAIHNPIVYSVSHPKFREAIQTTFPWLLTCCQFDEKECEDANDAEEEVVAS
-ER--GGESRDAAQMKEMMAMMQKMQAQQAAYQPPPPPQGY--PPQGYPPQGAYPPPQGYP
-PQGYPPQGYPPQGYPPQGAPPQVEAPQGAPPQGVDNQAYQA
->    28== X70498   1 Todarodes pacificus rhodopsin <retina>[FEBS317(1-2),5-11'93]
-------------------------------------------------------------
------------MGRDLRDNETWWY-----NPSIV-----------VHPHWREFDQVPDAV
-YYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMT
-ISCFL-KKWI--FGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHR
-RAFIMIIFVWLWSVLW-AIGPIFG-W-----GAYTLEGVLCNCSFDYIS--RDSTTRSNI
-LCMFILGFFGPILIIFFCYFNIVMSVSNH-------------------------------
-------------------------------------------------------------
-------------------EKEMAAMAKRLNAKELR---------------------KAQA
-GANA----------EMRLAKISIVIVSQFLLSWSPYAVVALLAQF---GPLEW-VTPYAA
-QLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQFDDKETEDDKDAETEIPAG
-ESSDAAPSADAAQMKEMMAMMQKMQQQQAAY----PPQGYAPPPQGYPPQGY--PPQGYP
-PQGYPPQGYPP---PPQGAPPQ-GAPPAAPPQGVDNQAYQA
->    29== L21195   1 human serotonin 5-HT7 receptor protein <placenta and fetal bra
----------MMDVNSSGRPDLYGHLRSFLLPEVGRGLPDLSPDGGADPVAGSWAPHLLS-
---EVTASPAPTWDAPPDNASGCGEQINYGRVE----------------------------
-KVVIGSILTLITLLTIAGNCLVVISVCFVKKLRQPSNYLIVSLALADLSVAVAV-MPFVS
-VTDLIGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGK
-CMAKMILSVWLLSASI-TLPPLFG-W-----AQNVNDDKVCLISQDF----------GYT
-IYSTAVAFYIPMSVMLFMYYQIYKAARKSAAKHKFPGFPRVEPDSVIAL-----------
-------------------------------------------------------------
-------------------NGIVKLQKEVEECANLSR-------------------LLKHE
-RKNI-----SIFKREQKAATTLGIIVGAFTVCWLPFFLLSTARPFICGTSCSC-IPLWVE
-RTFLWLGYANSLINPFIYAFFNRDLRTTYRSLLQCQYRNINRKLSAAGMHEALKLAERPE
-RPEFVLQNADYCRKKGHDS-----------------------------------------
------------------------------------------
->    30== L15228   1 rat 5HT-7 serotonin receptor <>[JBC268,18200-18204'93]
------------------------------------------------------MPHLLSG
-FLEVTASPAPTWDAPPDNVSGCGEQINYGRVE----------------------------
-KVVIGSILTLITLLTIAGNCLVVISVSFVKKLRQPSNYLIVSLALADLSVAVAV-MPFVS
-VTDLIGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGK
-CMAKMILSVWLLSASI-TLPPLFG-W-----AQNVNDDKVCLISQDF----------GYT
-IYSTAVAFYIPMSVMLFMYYQIYKAARKSAAKHKFPGFPRVQPESVISL-----------
-------------------------------------------------------------
-------------------NGVVKLQKEVEECANLSR-------------------LLKHE
-RKNI-----SIFKREQKAATTLGIIVGAFTVCWLPFFLLSTARPFICGTSCSC-IPLWVE
-RTCLWLGYANSLINPFIYAFFNRDLRPTSRSLLQCQYRNINRKLSAAGMHEALKLAERPE
-RSEFVLQNSDHCGKKGHDT-----------------------------------------
------------------------------------------
->    31=p A47425 serotonin receptor 5HT-7 - rat
------------------------------------------------------MPHLLSG
-FLEVTASPAPTWDAPPDNVSGCGEQINYGRVE----------------------------
-KVVIGSILTLITLLTIAGNCLVVISVSFVKKLRQPSNYLIVSLALADLSVAVAV-MPFVS
-VTDLIGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGK
-CMAKMILSVWLLSASI-TLPPLFG-W-----AQNVNDDKVCLISQDF----------GYT
-IYSTAVAFYIPMSVMLFMYYQIYKAARKSAAKHKFPGFPRVQPESVISL-----------
-------------------------------------------------------------
-------------------NGVVKLQKEVEECANLSR-------------------LLKHE
-RKNI-----SIFKREQKAATTLGIIVGAFTVCWLPFFLLSTARPFICGTSCSC-IPLWVE
-RTCLWLGYANSLINPFIYAFFNRDLRTTYRSLLQCQYRNINRKLSAAGMHEALKLAERPE
-RSEFVLQNSDHCGKKGHDT-----------------------------------------
------------------------------------------
->    32== M83181   1 human serotonin receptor <>[JBC267(11),7553-7562'92]
-MDVLSPGQGN---------------------------------------NTTSPPAPFET
-GGNTTGISDVTVSY----------------------------------------------
-QVITSLLLGTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLV-LPMAA
-LYQVL-NKWT--LGQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVNKRTPR
-RAAALISLTWLIGFLI-SIPPMLG-WRTP---EDRSDPDACTISKDH----------GYT
-IYSTFGAFYIPLLLMLVLYGRIFRAARFRIRK----------------------------
------------TVKKVEKTGADTRHGASPAPQPKKS----------VNGESGSRNWRLGV
-ESKAGGALCANGAVRQGDDGAALEVIEVHRVGNSKEHLPLPSEAGPTPCA--PASFERKN
-ERNAEAKRKMALARERKTVKTLGIIMGTFILCWLPFFIVALVLPF---CESSCHMPTLLG
-AIINWLGYSNSLLNPVIYAYFNKDFQNAFKKIIKCKFCRQ--------------------
-------------------------------------------------------------
------------------------------------------
->    33=p A35181 serotonin receptor class 1A - rat
-MDVFSFGQGN---------------------------------------NTTASQEPFGT
-GGNVTSISDVTFSY----------------------------------------------
-QVITSLLLGTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLV-LPMAA
-LYQVL-NKWT--LGQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVNKRTPR
-RAAALISLTWLIGFLI-SIPPMLG-WRTP---EDRSDPDACTISKDH----------GYT
-IYSTFGAFYIPLLLMLVLYGRIFRAARFRIRK----------------------------
------------TVRKVEKKGAGTSLGTSSAPPPKKS----------LNGQPGSGDWRRCA
-ENRAVGTPCTNGAVRQGDDEATLEVIEVHRVGNSKEHLPLPSESGSNSYA--PACLERKN
-ERNAEAKRKMALARERKTVKTLGIIMGTFILCWLPFFIVALVLPF---CESSCHMPALLG
-AIINWLGYSNSLLNPVIYAYFNKDFQNAFKKIIKCKFCRR--------------------
-------------------------------------------------------------
------------------------------------------
->    34== L06803   1 Lymnaea stagnalis serotonin receptor <>[PNAS90,11-15'93]
-MANFTFGDLALDVARMGGLASTPSGLR----------------------STGLTTPGLSP
-TGLVTSDFNDSYGLTGQFINGSHSSRSRDNASANDTSATN----MTDDRYWSLTVYSHEH
-LVLTSVILGLFVLCCIIGNCFVIAAVMLERSLHNVANYLILSLAVADLMVAVLV-MPLSV
-VSEIS-KVWF--LHSEVCDMWISVDVLCCTASILHLVAIAMDRYWAVTS-IDYIRRRSAR
-RILLMIMVVWIVALFI-SIPPLFG-WRDP--NNDPDKTGTCIISQDK----------GYT
-IFSTVGAFYLPMLVMMIIYIRIWLVARSRIRKDKFQMTKARLKTEETTLVASPKTEYSVV
-SDCNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKKNRAKKLPENANGVNSNSSSSERLKQ
-IQIETAEAFANGCA----EEASIAMLERQ-CNNGKK-------------------ISSND
-TPYSRTREKLELKRERKAARTLAIITGAFLICWLPFFIIALIGPF---VDPEG-IPPFAR
-SFVLWLGYFNSLLNPIIYTIFSPEFRSAFQKILFGKYRRGHR------------------
-------------------------------------------------------------
------------------------------------------
->    35=p A47174 serotonin receptor, 5HTlym receptor - great pond snail
-MANFTFGDLALDVARMGGLASTPSGLR----------------------STGLTTPGLSP
-TGLVTSDFNDSYGLTGQFINGSHSSRSRDNASANDTSATN----MTDDRYWSLTVYSHEH
-LVLTSVILGLFVLCCIIGNCFVIAAVMLERSLHNVANYLILSLAVADLMVAVLV-MPLSV
-VSEIS-KVWF--LHSEVCDMWISVDVLCCTASILHLVAIAMDRYWAVTS-IDYIRRRSAR
-RILLMIMVVWIVALFI-SIPPLFG-WRDP--NNDPDKTGTCIISQDK----------GYT
-IFSTVGAFYLPMLVMMIIYIRIWLVARSRIRKDKFQMTKARLKTEETTLVASPKTEYSVV
-SDCNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKKNRAKKLPENANGVNSNSSSSERLKQ
-IQIETAEAFANGCA----EEASIAMLERQ-CNNGKK-------------------ISSND
-TPYSRTREKLELKRERKAARTLAIITGAFLICWLPFFIIALIGPF---VDPEG-IPPFAR
-SFVLWLGYFNSLLNPIIYTIFSPEFRSAFQKILFGKYRRGHR------------------
-------------------------------------------------------------
------------------------------------------
->    36== X95604   1 Bombyx mori serotonin receptor <antennae>[InsectBiochem.Mol.Bi
----------------------------MEGAEGQEELDWEALYLRLPLQNCSWNSTGWEP
-NWNVTVVPNTTWWQ--------------------ASAPFDTPAALVR-------------
-AAAKAVVLGLLILATVVGNVFVIAAILLERHLRSAANNLILSLAVADLLVACLV-MPLGA
-VYEVV-QRWT--LGPELCDMWTSGDVLCCTASILHLVAIALDRYWAVTN-IDYIHASTAK
-RVGMMIACVWTVSFFV-CIAQLLG-WKDPDWNQRVSEDLRCVVSQDV----------GYQ
-IFATASSFYVPVLIILILYWRIYQTARKRIRR----------------------------
------------------RRGATARGGVGPPPVPAGGALVA------GGGSGGIAAAVVAV
-IGRPLPTISETTTTGFTNVSSNNTSPEKQSCANGLEADPPTTGYGAVAAAYYPSLVRRKP
-KEAA------DSKRERKAAKTLAIITGAFVACWLPFFVLAILVPT---CDCE--VSPVLT
-SLSLWLGYFNSTLNPVIYTVFSPEFRHAFQRLLCGRRVRRRRAPQ---------------
-------------------------------------------------------------
------------------------------------------