Delete unneeded directory
[jabaws.git] / website / archive / binaries / mac / src / mafft / test / sample.lins1
diff --git a/website/archive/binaries/mac/src/mafft/test/sample.lins1 b/website/archive/binaries/mac/src/mafft/test/sample.lins1
deleted file mode 100644 (file)
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@@ -1,468 +0,0 @@
->     1== M63632   1 Lampetra japonica rhodopsin <>[BBRC174,1125-1132'91]
-MN--------------------GTE--GDNFYVPFSNKTG--LARSP-------------
---------------------YEYPQY-YLAEPW---------KYSA-----LAAYMFFLI
-LVGFPVNFLTLFVTVQHKKLRTPLNYILLNLAMANLFMVLFG-FTVTMYTSMN-GYFV--
-FGPTMCSIEGFFATLGGEVALWSLVVLAIERYIVICKPMGNF-RFGNTHAIMGVAFTWIM
-ALAC-AAPPLV-GWS-----RYIPEGMQCSCGPDYYTLNPNFNNESYVVYMFVVHFLVPF
-VIIFFCYGRLLCTVKEAAAAQQESA-----------------------------------
-------------------------------------------------------------
-----------------------------------------------STQKAEKEVTRMVV
-LMVIGFLVCWVPYASVAFYIFT--HQGSD-FGATFMTLPAFFAKSSALYNPVIYILMNKQ
-FRNCMITTL-----CCGKNPLGDDE-SG-ASTSKTEVS----------------------
-------------------------------------------------------------
-----------------SVS-TSPVSPA---
->     2== U22180   1 rat opsin <rod>[J.Mol.Neurosci.5(3),207-209'94]
-MN--------------------GTE--GPNFYVPFSNITG--VVRSP-------------
---------------------FEQPQY-YLAEPW---------QFSM-----LAAYMFLLI
-VLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGG-FTTTLYTSLH-GYFV--
-FGPTGCNLEGFFATLGGEIGLWSLVVLAIERYVVVCKPMSNF-RFGENHAIMGVAFTWVM
-ALAC-AAPPLV-GWS-----RYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPM
-IVIFFCYGQLVFTVKEAAAQQQESA-----------------------------------
-------------------------------------------------------------
-----------------------------------------------TTQKAEKEVTRMVI
-IMVIFFLICWLPYASVAMYIFT--HQGSN-FGPIFMTLPAFFAKTASIYNPIIYIMMNKQ
-FRNCMLTSL-----CCGKNPLGDDE-AS-ATASKTETS----------------------
-------------------------------------------------------------
-----------------QVA-PA--------
->     3== M92038   1 chicken green sensitive cone opsin <retina>[PNAS89,5932-5936'9
-MN--------------------GTE--GINFYVPMSNKTG--VVRSP-------------
---------------------FEYPQY-YLAEPW---------KYRL-----VCCYIFFLI
-STGLPINLLTLLVTFKHKKLRQPLNYILVNLAVADLFMACFG-FTVTFYTAWN-GYFV--
-FGPVGCAVEGFFATLGGQVALWSLVVLAIERYIVVCKPMGNF-RFSATHAMMGIAFTWVM
-AFSC-AAPPLF-GWS-----RYMPEGMQCSCGPDYYTHNPDYHNESYVLYMFVIHFIIPV
-VVIFFSYGRLICKVREAAAQQQESA-----------------------------------
-------------------------------------------------------------
-----------------------------------------------TTQKAEKEVTRMVI
-LMVLGFMLAWTPYAVVAFWIFT--NKGAD-FTATLMAVPAFFSKSSSLYNPIIYVLMNKQ
-FRNCMITTI-----CCGKNPFGDEDVSSTVSQSKTEVS----------------------
-------------------------------------------------------------
-----------------SVS-SSQVSPA---
->     4=p A45229 opsin, green-sensitive (clone GFgr-1) - goldfish
-MN--------------------GTE--GKNFYVPMSNRTG--LVRSP-------------
---------------------FEYPQY-YLAEPW---------QFKI-----LALYLFFLM
-SMGLPINGLTLVVTAQHKKLRQPLNFILVNLAVAGTIMVCFG-FTVTFYTAIN-GYFV--
-LGPTGCAVEGFMATLGGEVALWSLVVLAIERYIVVCKPMGSF-KFSSSHAFAGIAFTWVM
-ALAC-AAPPLF-GWS-----RYIPEGMQCSCGPDYYTLNPDYNNESYVIYMFVCHFILPV
-AVIFFTYGRLVCTVKAAAAQQQDSA-----------------------------------
-------------------------------------------------------------
-----------------------------------------------STQKAEREVTKMVI
-LMVFGFLIAWTPYATVAAWIFF--NKGAD-FSAKFMAIPAFFSKSSALYNPVIYVLLNKQ
-FRNCMLTTI-----FCGKNPLGDDE-SSTVSTSKTEVS----------------------
-------------------------------------------------------------
-----------------SVS-PA--------
->     5=p B45229 opsin, green-sensitive (clone GFgr-2) - goldfish
-MN--------------------GTE--GNNFYVPLSNRTG--LVRSP-------------
---------------------FEYPQY-YLAEPW---------QFKL-----LAVYMFFLI
-CLGLPINGLTLICTAQHKKLRQPLNFILVNLAVAGAIMVCFG-FTVTFYTAIN-GYFA--
-LGPTGCAVEGFMATLGGEVALWSLVVLAIERYIVVCKPMGSF-KFSSTHASAGIAFTWVM
-AMAC-AAPPLV-GWS-----RYIPEGIQCSCGPDYYTLNPEYNNESYVLYMFICHFILPV
-TIIFFTYGRLVCTVKAAAAQQQDSA-----------------------------------
-------------------------------------------------------------
-----------------------------------------------STQKAEREVTKMVI
-LMVLGFLVAWTPYATVAAWIFF--NKGAA-FSAQFMAIPAFFSKTSALYNPVIYVLLNKQ
-FRSCMLTTL-----FCGKNPLGDEE-SSTVSTSKTEVS----------------------
-------------------------------------------------------------
-----------------SVS-PA--------
->     6== L11864   1 Carassius auratus blue cone opsin <retina>[Biochemistry32,208-
-MK--------------------QVPEFHEDFYIPIPLDINNLSAYSP-------------
---------------------FLVPQD-HLGNQG---------IFMA-----MSVFMFFIF
-IGGASINILTILCTIQFKKLRSHLNYILVNLSIANLFVAIFG-SPLSFYSFFN-RYFI--
-FGATACKIEGFLATLGGMVGLWSLAVVAFERWLVICKPLGNF-TFKTPHAIAGCILPWIS
-ALAA-SLPPLF-GWS-----RYIPEGLQCSCGPDWYTTNNKYNNESYVMFLFCFCFAVPF
-GTIVFCYGQLLITLKLAAKAQADSA-----------------------------------
-------------------------------------------------------------
-----------------------------------------------STQKAEREVTKMVV
-VMVLGFLVCWAPYASFSLWIVS--HRGEE-FDLRMATIPSCLSKASTVYNPVIYVLMNKQ
-FRSCMM-KM-----VCGKN-IEEDE-AS-TSSQVTQVS----------------------
-------------------------------------------------------------
-----------------SVA-PEK-------
->     7== M13299   1 human BCP <>[Science232(4747),193-202'86]
-MR--------------------KMS--EEEFYL-----FKNISSVGP-------------
---------------------WDGPQY-HIAPVW---------AFYL-----QAAFMGTVF
-LIGFPLNAMVLVATLRYKKLRQPLNYILVNVSFGGFLLCIFS-VFPVFVASCN-GYFV--
-FGRHVCALEGFLGTVAGLVTGWSLAFLAFERYIVICKPFGNF-RFSSKHALTVVLATWTI
-GIGV-SIPPFF-GWS-----RFIPEGLQCSCGPDWYTVGTKYRSESYTWFLFIFCFIVPL
-SLICFSYTQLLRALKAVAAQQQESA-----------------------------------
-------------------------------------------------------------
-----------------------------------------------TTQKAEREVSRMVV
-VMVGSFCVCYVPYAAFAMYMVN--NRNHG-LDLRLVTIPSFFSKSACIYNPIIYCFMNKQ
-FQACIM-KM-----VCGKA-MTDES-DT-CSSQKTEVS----------------------
-------------------------------------------------------------
-----------------TVS-STQVGPN---
->     8=opsin, greensensitive  human (fragment) S07060
-------------------------------------------------------------
-------------------------------------------------------------
-----------------------------------DLAETVIA-STISIVNQVS-GYFV--
-LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGNV-RFDAKLAIVGIAFSWIW
-AAVW-TAPPIF-GWS-----RYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCITPL
-SIIVLCYLQVWLAIRAVAKQQKESE-----------------------------------
-------------------------------------------------------------
-----------------------------------------------STQKAEKEVTRMVV
-VMVLAFC-----------------------------------------------------
-------------------------------------------------------------
-------------------------------------------------------------
-------------------------------
->     9== K03494   1 human GCP <>[Science232(4747),193-202'86]
-MAQQWS-LQRLAGRHPQDSYEDSTQ--SSIFTY-----TNSNSTRGP-------------
---------------------FEGPNY-HIAPRW---------VYHL-----TSVWMIFVV
-IASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIA-STISVVNQVY-GYFV--
-LGHPMCVLEGYTVSLCGITGLWSLAIISWERWMVVCKPFGNV-RFDAKLAIVGIAFSWIW
-AAVW-TAPPIF-GWS-----RYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCITPL
-SIIVLCYLQVWLAIRAVAKQQKESE-----------------------------------
-------------------------------------------------------------
-----------------------------------------------STQKAEKEVTRMVV
-VMVLAFCFCWGPYAFFACFAAA--NPGYP-FHPLMAALPAFFAKSATIYNPVIYVFMNRQ
-FRNCILQLF----------GKKVDDGSELSSASKTEVS----------------------
-------------------------------------------------------------
-----------------SV---SSVSPA---
->    10== Z68193   1 human Red Opsin <>[]
-MAQQWS-LQRLAGRHPQDSYEDSTQ--SSIFTY-----TNSNSTRGP-------------
---------------------FEGPNY-HIAPRW---------VYHL-----TSVWMIFVV
-TASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIA-STISIVNQVS-GYFV--
-LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGNV-RFDAKLAIVGIAFSWIW
-SAVW-TAPPIF-GWS-----RYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCIIPL
-AIIMLCYLQVWLAIRAVAKQQKESE-----------------------------------
-------------------------------------------------------------
-----------------------------------------------STQKAEKEVTRMVV
-VMIFAYCVCWGPYTFFACFAAA--NPGYA-FHPLMAALPAYFAKSATIYNPVIYVFMNRQ
-FRNCILQLF----------GKKVDDGSELSSASKTEVS----------------------
-------------------------------------------------------------
-----------------SV---SSVSPA---
->    11== M92036   1 Gecko gecko P521 <retina>[PNAS89,6841-6845'92]
-MTEAWNVAVFAARRSRDD--DDTTR--GSVFTY-----TNTNNTRGP-------------
---------------------FEGPNY-HIAPRW---------VYNL-----VSFFMIIVV
-IASCFTNGLVLVATAKFKKLRHPLNWILVNLAFVDLVETLVA-STISVFNQIF-GYFI--
-LGHPLCVIEGYVVSSCGITGLWSLAIISWERWFVVCKPFGNI-KFDSKLAIIGIVFSWVW
-AWGW-SAPPIF-GWS-----RYWPHGLKTSCGPDVFSGSVELGCQSFMLTLMITCCFLPL
-FIIIVCYLQVWMAIRAVAAQQKESE-----------------------------------
-------------------------------------------------------------
-----------------------------------------------STQKAEREVSRMVV
-VMIVAFCICWGPYASFVSFAAA--NPGYA-FHPLAAALPAYFAKSATIYNPVIYVFMNRQ
-FRNCIMQLF----------GKKVDDGSEASTTSRTEVS----------------------
-------------------------------------------------------------
-----------------SVS-NSSVAPA---
->    12== M62903   1 chicken visual pigment <>[BBRC173,1212-1217'90]
-MA-AWE-AAFAARRRHEE--EDTTR--DSVFTY-----TNSNNTRGP-------------
---------------------FEGPNY-HIAPRW---------VYNL-----TSVWMIFVV
-AASVFTNGLVLVATWKFKKLRHPLNWILVNLAVADLGETVIA-STISVINQIS-GYFI--
-LGHPMCVVEGYTVSACGITALWSLAIISWERWFVVCKPFGNI-KFDGKLAVAGILFSWLW
-SCAW-TAPPIF-GWS-----RYWPHGLKTSCGPDVFSGSSDPGVQSYMVVLMVTCCFFPL
-AIIILCYLQVWLAIRAVAAQQKESE-----------------------------------
-------------------------------------------------------------
-----------------------------------------------STQKAEKEVSRMVV
-VMIVAYCFCWGPYTFFACFAAA--NPGYA-FHPLAAALPAYFAKSATIYNPIIYVFMNRQ
-FRNCILQLF----------GKKVDDGSEVST-SRTEVS----------------------
-------------------------------------------------------------
-----------------SVS-NSSVSPA---
->    13== S75720   1 chicken P-opsin <>[Science267(5203),1502-1506'95]
-MS--------------------------SNSSQ-----APPNGTPGP-------------
---------------------FDGPQWPYQAPQS---------TYVG-----VAVLMGTVV
-ACASVVNGLVIVVSICYKKLRSPLNYILVNLAVADLLVTLCG-SSVSLSNNIN-GFFV--
-FGRRMCELEGFMVSLTGIVGLWSLAILALERYVVVCKPLGDF-QFQRRHAVSGCAFTWGW
-ALLW-SAPPLL-GWS-----SYVPEGLRTSCGPNWYTGGSN--NNSYILSLFVTCFVLPL
-SLILFSYTNLLLTLRAAAAQQKEAD-----------------------------------
-------------------------------------------------------------
-----------------------------------------------TTQRAEREVTRMVI
-VMVMAFLLCWLPYSTFALVVAT--HKGII-IQPVLASLPSYFSKTATVYNPIIYVFMNKQ
-FQSCLLEML-----CCGYQPQRTGKASPGTPGPHADVT----------------------
-------------------------------------------------------------
-----------------AAGLRNKVMPAHPV
->    14== M17718   1 D.melanogaster Rh3 <>[J.Neurosci.7,1550-1557'87]
-MESGNVSSSLFGNVSTALRPE----ARLSA---E---TRLLGWNVPP-------------
---------------------EELR---HIPEHWLTYPEPPESMNYL-----LGTLYIFFT
-LMSMLGNGLVIWVFSAAKSLRTPSNILVINLAFCDFMMMVK--TPIFIYNSFH-QGYA--
-LGHLGCQIFGIIGSYTGIAAGATNAFIAYDRFNVITRPMEG--KMTHGKAIAMIIFIYMY
-ATPW-VVACYTETWG-----RFVPEGYLTSCTFDYLTDN--FDTRLFVACIFFFSFVCPT
-TMITYYYSQIVGHVFSHEKALRDQAKKMNVESLR--------------------------
-------------------------------------------------------------
------------------------------------------SNVDKNKETAEIRIAKAAI
-TICFLFFCSWTPYGVMSLIGAF--GDKTL-LTPGATMIPACACKMVACIDPFVYAISHPR
-YRMELQKRCPWL--ALNEKAPESSAVASTST-TQEPQQT---------------------
-------------------------------------------------------------
-----------------TAA-----------
->    15== X65879   1 Drosophila pseudoobscura Dpse\Rh3 <>[Genetics132(1),193-204'92
-MEYHNVSSVL-GNVSSVLRPD----ARLSA---E---SRLLGWNVPP-------------
---------------------DELR---HIPEHWLIYPEPPESMNYL-----LGTLYIFFT
-VISMIGNGLVMWVFSAAKSLRTPSNILVINLAFCDFMMMIK--TPIFIYNSFH-QGYA--
-LGHLGCQIFGVIGSYTGIAAGATNAFIAYDRYNVITRPMEG--KMTHGKAIAMIIFIYLY
-ATPW-VVACYTESWG-----RFVPEGYLTSCTFDYLTDN--FDTRLFVACIFFFSFVCPT
-TMITYYYSQIVGHVFSHEKALRDQAKKMNVDSLR--------------------------
-------------------------------------------------------------
------------------------------------------SNVDKSKEAAEIRIAKAAI
-TICFLFFASWTPYGVMSLIGAF--GDKTL-LTPGATMIPACTCKMVACIDPFVYAISHPR
-YRMELQKRCPWL--AISEKAPESRAAISTST-TQEQQQT---------------------
-------------------------------------------------------------
-----------------TAA-----------
->    16== M17730   1 D.melanogaster Rh4 opsin <>[J.Neurosci.7,1558-1566'87]
-ME------PLCNASEPPLRPE----AR-SSGNGD---LQFLGWNVPP-------------
---------------------DQIQ---YIPEHWLTQLEPPASMHYM-----LGVFYIFLF
-CASTVGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDLIMCLK--APIF--NSFH-RGFAIY
-LGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNVITKPMNR--NMTFTKAVIMNIIIWLY
-CTPW-VVLPLTQFWD-----RFVPEGYLTSCSFDYLSDN--FDTRLFVGTIFFFSFVCPT
-LMILYYYSQIVGHVFSHEKALREQAKKMNVESLR--------------------------
-------------------------------------------------------------
------------------------------------------SNVDKSKETAEIRIAKAAI
-TICFLFFVSWTPYGVMSLIGAF--GDKSL-LTQGATMIPACTCKLVACIDPFVYAISHPR
-YRLELQKRCPWL--GVNEKSGEISSAQSTTT-QEQQQTT---------------------
-------------------------------------------------------------
-----------------AA------------
->    17== X65880   1 Drosophila pseudoobscura Dpse\Rh4 <>[Genetics132(1),193-204'92
-MD------ALCNASEPPLRPE----ARMSSGSDE---LQFLGWNVPP-------------
---------------------DQIQ---YIPEHWLTQLEPPASMHYM-----LGVFYIFLF
-FASTLGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDLIMCLK--APIFIYNSFH-RGFA--
-LGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNVITKPMNR--NMTFTKAVIMNIIIWLY
-CTPW-VVLPLTQFWD-----RFVPEGYLTSCSFDYLSDN--FDTRLFVGTIFLFSFVVPT
-LMILYYYSQIVGHVFNHEKALREQAKKMNVESLR--------------------------
-------------------------------------------------------------
------------------------------------------SNVDKSKETAEIRIAKAAI
-TICFLFFVSWTPYGVMSLIGAF--GDKSL-LTPGATMIPACTCKLVACIEPFVYAISHPR
-YRMELQKRCPWL--GVNEKSGEASSAQSTTT-QEQTQQT---------------------
-------------------------------------------------------------
-----------------SAA-----------
->    18== D50584   1 Hemigrapsus sanguineus opsin BcRh2 <compound eye>[J.Exp.Biol.1
-M-----------TNATGPQMAYYGAASMDFGYPE---GVSIVDFVRP-------------
---------------------EIKP---YVHQHWYNYPPVNPMWHYL-----LGVIYLFLG
-TVSIFGNGLVIYLFNKSAALRTPANILVVNLALSDLIMLTTN-VPFFTYNCFSGGVWM--
-FSPQYCEIYACLGAITGVCSIWLLCMISFDRYNIICNGFNGP-KLTTGKAVVFALISWVI
-AIGC-ALPPFF-GWG-----NYILEGILDSCSYDYLTQD--FNTFSYNIFIFVFDYFLPA
-AIIVFSYVFIVKAIFAHEAAMRAQAKKMNVSTLR--------------------------
-------------------------------------------------------------
------------------------------------------S-NEADAQRAEIRIAKTAL
-VNVSLWFICWTPYALISLKGVM--GDTSG-ITPLVSTLPALLAKSCSCYNPFVYAISHPK
-YRLAITQHLPWF--CVHETETKSNDDSQSNS-TVAQDK----------------------
-------------------------------------------------------------
-------------------A-----------
->    19== D50583   1 Hemigrapsus sanguineus opsin BcRh1 <compound eye>[J.Exp.Biol.1
-M-----------ANVTGPQMAFYGSGAATFGYPE---GMTVADFVPD-------------
---------------------RVKH---MVLDHWYNYPPVNPMWHYL-----LGVVYLFLG
-VISIAGNGLVIYLYMKSQALKTPANMLIVNLALSDLIMLTTN-FPPFCYNCFSGGRWM--
-FSGTYCEIYAALGAITGVCSIWTLCMISFDRYNIICNGFNGP-KLTQGKATFMCGLAWVI
-SVGW-SLPPFF-GWG-----SYTLEGILDSCSYDYFTRD--MNTITYNICIFIFDFFLPA
-SVIVFSYVFIVKAIFAHEAAMRAQAKKMNVTNLR--------------------------
-------------------------------------------------------------
------------------------------------------S-NEAETQRAEIRIAKTAL
-VNVSLWFICWTPYAAITIQGLL--GNAEG-ITPLLTTLPALLAKSCSCYNPFVYAISHPK
-FRLAITQHLPWF--CVHEKDPNDVEENQSSN-TQTQEK----------------------
-------------------------------------------------------------
-------------------S-----------
->    20== K02320   1 D.melanogaster opsin <>[Cell40,851-858'85]
-ME-----SFAVAAAQLGPHFA-----PLS--------NGSVVDKVTP-------------
---------------------DMAH---LISPYWNQFPAMDPIWAKI-----LTAYMIMIG
-MISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-TPMMGINLYF-ETWV--
-LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAGR-PMTIPLALGKM------
----------------------YVPEGNLTSCGIDYLERD--WNPRSYLIFYSIFVYYIPL
-FLICYSYWFIIAAVSAHEKAMREQAKKMNVKSLR--------------------------
-------------------------------------------------------------
------------------------------------------S-SEDAEKSAEGKLAKVAL
-VTITLWFMAWTPYLVINCMGLF--KF-EG-LTPLNTIWGACFAKSAACYNPIVYGISHPK
-YRLALKEKCPCC--VFGKVDDGKSSDAQSQA-TASEAE----------------------
-------------------------------------------------------------
-----------------SKA-----------
->    21== K02315   1 D.melanogaster ninaE <>[Cell40,839-850'85]
-ME-----SFAVAAAQLGPHFA-----PLS--------NGSVVDKVTP-------------
---------------------DMAH---LISPYWNQFPAMDPIWAKI-----LTAYMIMIG
-MISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-TPMMGINLYF-ETWV--
-LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAGR-PMTIPLALGKIAYIWFM
-SSIW-CLAPAF-GWS-----RYVPEGNLTSCGIDYLERD--WNPRSYLIFYSIFVYYIPL
-FLICYSYWFIIAAVSAHEKAMREQAKKMNVKSLR--------------------------
-------------------------------------------------------------
------------------------------------------S-SEDAEKSAEGKLAKVAL
-VTITLWFMAWTPYLVINCMGLF--KF-EG-LTPLNTIWGACFAKSAACYNPIVYGISHPK
-YRLALKEKCPCC--VFGKVDDGKSSDAQSQA-TASEAE----------------------
-------------------------------------------------------------
-----------------SKA-----------
->    22== X65877   1 Drosophila pseudoobscura Dpse\ninaE <>[Genetics132(1),193-204'
-MD-----SFAAVATQLGPQFA-----APS--------NGSVVDKVTP-------------
---------------------DMAH---LISPYWDQFPAMDPIWAKI-----LTAYMIIIG
-MISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-TPMMGINLYF-ETWV--
-LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAGR-PMTIPLALGKIAYIWFM
-STIWCCLAPVF-GWS-----RYVPEGNLTSCGIDYLERD--WNPRSYLIFYSIFVYYIPL
-FLICYSYWFIIAAVSAHEKAMREQAKKMNVKSLR--------------------------
-------------------------------------------------------------
------------------------------------------S-SEDADKSAEGKLAKVAL
-VTISLWFMAWTPYLVINCMGLF--KF-EG-LTPLNTIWGACFAKSAACYNPIVYGISHPK
-YRLALKEKCPCC--VFGKVDDGKSSEAQSQA-TTSEAE----------------------
-------------------------------------------------------------
-----------------SKA-----------
->    23== M12896   1 D.melanogaster Rh2 <>[Cell44,705-710'86]
-MERSHLPETPFDLAHSGPRFQ-----AQSSG------NGSVLDNVLP-------------
---------------------DMAH---LVNPYWSRFAPMDPMMSKI-----LGLFTLAIM
-IISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMASQ-SPVMIINFYY-ETWV--
-LGPLWCDIYAGCGSLFGCVSIWSMCMIAFDRYNVIVKGINGT-PMTIKTSIMKILFIWMM
-AVFW-TVMPLI-GWS-----AYVPEGNLTACSIDYMTRM--WNPRSYLITYSLFVYYTPL
-FLICYSYWFIIAAVAAHEKAMREQAKKMNVKSLR--------------------------
-------------------------------------------------------------
------------------------------------------S-SEDCDKSAEGKLAKVAL
-TTISLWFMAWTPYLVICYFGLF--KI-DG-LTPLTTIWGATFAKTSAVYNPIVYGISHPK
-YRIVLKEKCPMC--VFGNTDEPKPDAPASDTETTSEAD----------------------
-------------------------------------------------------------
-----------------SKA-----------
->    24== X65878   1 Drosophila pseudoobscura Dpse\Rh2 <>[Genetics132(1),193-204'92
-MERSLLPEPPLAMALLGPRFE-----AQTGG------NRSVLDNVLP-------------
---------------------DMAP---LVNPHWSRFAPMDPTMSKI-----LGLFTLVIL
-IISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMASQ-SPVMIINFYY-ETWV--
-LGPLWCDIYAACGSLFGCVSIWSMCMIAFDRYNVIVKGINGT-PMTIKTSIMKIAFIWMM
-AVFW-TIMPLI-GWS-----SYVPEGNLTACSIDYMTRQ--WNPRSYLITYSLFVYYTPL
-FMICYSYWFIIATVAAHEKAMRDQAKKMNVKSLR--------------------------
-------------------------------------------------------------
------------------------------------------S-SEDCDKSAENKLAKVAL
-TTISLWFMAWTPYLIICYFGLF--KI-DG-LTPLTTIWGATFAKTSAVYNPIVYGISHPN
-DRLVLKEKCPMC--VCGTTDEPKPDAPPSDTETTSEAE----------------------
-------------------------------------------------------------
-----------------SKD-----------
->    25== U26026   1 Apis mellifera long-wavelength rhodopsin <>[]
-M-----------IAVSGPSYE-----AFSYGGQARFNNQTVVDKVPP-------------
---------------------DMLH---LIDANWYQYPPLNPMWHGI-----LGFVIGMLG
-FVSAMGNGMVVYIFLSTKSLRTPSNLFVINLAISNFLMMFCM-SPPMVINCYY-ETWV--
-LGPLFCQIYAMLGSLFGCGSIWTMTMIAFDRYNVIVKGLSGK-PLSINGALIRIIAIWLF
-SLGW-TIAPMF-GWN-----RYVPEGNMTACGTDYFNRG--LLSASYLVCYGIWVYFVPL
-FLIIYSYWFIIQAVAAHEKNMREQAKKMNVASLR--------------------------
-------------------------------------------------------------
------------------------------------------S-SENQNTSAECKLAKVAL
-MTISLWFMAWTPYLVINFSGIF--NL-VK-ISPLFTIWGSLFAKANAVYNPIVYGISHPK
-YRAALFAKFPSL--AC-AAEPSSDAVSTTSG-TTTVTDN---------------------
-------------------------------------------------------------
--------------EK-SNA-----------
->    26== L03781   1 Limulus polyphemus opsin <>[PNAS90,6150-6154'93]
-M-------------ANQLSYS-----SLGWPYQP---NASVVDTMPK-------------
---------------------EMLY---MIHEHWYAFPPMNPLWYSI-----LGVAMIILG
-IICVLGNGMVIYLMMTTKSLRTPTNLLVVNLAFSDFCMMAFM-MPTMTSNCFA-ETWI--
-LGPFMCEVYGMAGSLFGCASIWSMVMITLDRYNVIVRGMAAA-PLTHKKATLLLLFVWIW
-SGGW-TILPFF-GWS-----RYVPEGNLTSCTVDYLTKD--WSSASYVVIYGLAVYFLPL
-ITMIYCYFFIVHAVAEHEKQLREQAKKMNVASLR--------------------------
-------------------------------------------------------------
------------------------------------------ANADQQKQSAECRLAKVAM
-MTVGLWFMAWTPYLIISWAGVF--SSGTR-LTPLATIWGSVFAKANSCYNPIVYGISHPR
-YKAALYQRFPSL--ACGSGESGSDVKSEASA-TTTMEEK---------------------
-------------------------------------------------------------
--------------PKIPEA-----------
->    27== X07797   1 Octopus dofleini rhodopsin <>[FEBS232(1),69-72'88]
-M-------------VESTTLV-----NQTWWY-----NPTV-------------------
----------------------------DIHPHWAKFDPIPDAVYYS-----VGIFIGVVG
-IIGILGNGVVIYLFSKTKSLQTPANMFIINLAMSDLSFSAINGFPLKTISAFM-KKWI--
-FGKVACQLYGLLGGIFGFMSINTMAMISIDRYNVIGRPMAASKKMSHRRAFLMIIFVWMW
-SIVW-SVGPVF-NWG-----AYVPEGILTSCSFDYLSTD--PSTRSFILCMYFCGFMLPI
-IIIAFCYFNIVMSVSNHEKEMAAMAKRLNAKELR--------------------------
-------------------------------------------------------------
------------------------------------------K-AQ-AGASAEMKLAKISM
-VIITQFMLSWSPYAIIALLAQF--GPAEW-VTPYAAELPVLFAKASAIHNPIVYSVSHPK
-FREAIQTTFPWLLTCCQFDEKECEDANDAEE-EVVASER--GGESRDAAQMKEMMAMMQK
-MQAQQAAYQP---PPPPQGYPPQGYPPQGAYPPPQGYPPQGYPPQGYPPQGYPPQGAPPQ
-VEAPQGAPPQGVDNQAYQA-----------
->    28== X70498   1 Todarodes pacificus rhodopsin <retina>[FEBS317(1-2),5-11'93]
-M-------------GRDLR-D-----NETWWY-----NPSI-------------------
----------------------------VVHPHWREFDQVPDAVYYS-----LGIFIGICG
-IIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFL-KKWI--
-FGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLW
-SVLW-AIGPIF-GWG-----AYTLEGVLCNCSFDYISRD--STTRSNILCMFILGFFGPI
-LIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELR--------------------------
-------------------------------------------------------------
------------------------------------------K-AQ-AGANAEMRLAKISI
-VIVSQFLLSWSPYAVVALLAQF--GPLEW-VTPYAAQLPVMFAKASAIHNPMIYSVSHPK
-FREAISQTFPWVLTCCQFDDKETEDDKDAET-EIPAGESSDAAPSADAAQMKEMMAMMQK
-MQQQQAAYPPQGYAPPPQGYPPQGYPPQGY--PPQGYPPQGYPP---PPQGAPPQGAPP-
------AAPPQGVDNQAYQA-----------
->    29== L21195   1 human serotonin 5-HT7 receptor protein <placenta and fetal bra
-MMDVNSSGRPDLYGHLRSFLLPEVGRGLPDLSPDG----GADPVAGSWAPHLLS---EVT
-ASPAPTWDAPPDNA------SGCGE----------QINYGRVEKVV-----IGSILTLIT
-LLTIAGNCLVVISVCFVKKLRQPSNYLIVSLALADLSVAVAV-MPFVSVTDLIGGKWI--
-FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAKMILSVWLL
-SASI-TLPPLF-GWA-----QNVNDDKVCLISQDF----------GYTIYSTAVAFYIPM
-SVMLFMYYQIYKAARKSAAKHKF--------------PGFPRVEPDSVIALNG-------
----------------------------------------------IVKLQKE--------
-----------VEECAN------------------LSRLLKHERKNISIFKREQKAATTLG
-IIVGAFTVCWLPFFLLSTARPFICGTSCSCIPLWVERTFLWLGYANSLINPFIYAFFNRD
-LRTTYRSLL-----QCQYRNINRKLSAAGMHEALKLAERPERPEFVLQNADYCRKKGHDS
-------------------------------------------------------------
-------------------------------
->    30== L15228   1 rat 5HT-7 serotonin receptor <>[JBC268,18200-18204'93]
-M------------------------------------------------PHLLSGFLEVT
-ASPAPTWDAPPDNV------SGCGE----------QINYGRVEKVV-----IGSILTLIT
-LLTIAGNCLVVISVSFVKKLRQPSNYLIVSLALADLSVAVAV-MPFVSVTDLIGGKWI--
-FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAKMILSVWLL
-SASI-TLPPLF-GWA-----QNVNDDKVCLISQDF----------GYTIYSTAVAFYIPM
-SVMLFMYYQIYKAARKSAAKHKF--------------PGFPRVQPESVISLNG-------
----------------------------------------------VVKLQKE--------
-----------VEECAN------------------LSRLLKHERKNISIFKREQKAATTLG
-IIVGAFTVCWLPFFLLSTARPFICGTSCSCIPLWVERTCLWLGYANSLINPFIYAFFNRD
-LRPTSRSLL-----QCQYRNINRKLSAAGMHEALKLAERPERSEFVLQNSDHCGKKGHDT
-------------------------------------------------------------
-------------------------------
->    31=p A47425 serotonin receptor 5HT-7 - rat
-M------------------------------------------------PHLLSGFLEVT
-ASPAPTWDAPPDNV------SGCGE----------QINYGRVEKVV-----IGSILTLIT
-LLTIAGNCLVVISVSFVKKLRQPSNYLIVSLALADLSVAVAV-MPFVSVTDLIGGKWI--
-FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAKMILSVWLL
-SASI-TLPPLF-GWA-----QNVNDDKVCLISQDF----------GYTIYSTAVAFYIPM
-SVMLFMYYQIYKAARKSAAKHKF--------------PGFPRVQPESVISLNG-------
----------------------------------------------VVKLQKE--------
-----------VEECAN------------------LSRLLKHERKNISIFKREQKAATTLG
-IIVGAFTVCWLPFFLLSTARPFICGTSCSCIPLWVERTCLWLGYANSLINPFIYAFFNRD
-LRTTYRSLL-----QCQYRNINRKLSAAGMHEALKLAERPERSEFVLQNSDHCGKKGHDT
-------------------------------------------------------------
-------------------------------
->    32== M83181   1 human serotonin receptor <>[JBC267(11),7553-7562'92]
-MDVLSPG-----------------------------------------------------
----------QGNNT------TSPPAPFETGGNTTGISDVTVSYQVI-----TSLLLGTLI
-FCAVLGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLV-LPMAALYQVL-NKWT--
-LGQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVNKRTPRRAAALISLTWLI
-GFLI-SIPPML-GWRTPEDRSDPD---ACTISKDH----------GYTIYSTFGAFYIPL
-LLMLVLYGRIFRAARFRIRKTVKKVEKTGADTRHGASPAPQPKK-----SVNG--ESGSR
-NWRLGVESKAGGALCANGAVRQGDDGAAL--EVIEVHRVGNSKEHLPLPSEAGPTPCAPA
-S------------------FERKNERNA-------------EAKRKMALARERKTVKTLG
-IIMGTFILCWLPFFIVALVLPF-CESSCH-MPTLLGAIINWLGYSNSLLNPVIYAYFNKD
-FQNAFKKII-----KCKFCR--Q-------------------------------------
-------------------------------------------------------------
-------------------------------
->    33=p A35181 serotonin receptor class 1A - rat
-MDVFSFG-----------------------------------------------------
----------QGNNT------TASQEPFGTGGNVTSISDVTFSYQVI-----TSLLLGTLI
-FCAVLGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLV-LPMAALYQVL-NKWT--
-LGQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVNKRTPRRAAALISLTWLI
-GFLI-SIPPML-GWRTPEDRSDPD---ACTISKDH----------GYTIYSTFGAFYIPL
-LLMLVLYGRIFRAARFRIRKTVRKVEKKGAGTSLGTSSAPPPKK-----SLNG--QPGSG
-DWRRCAENRAVGTPCTNGAVRQGDDEATL--EVIEVHRVGNSKEHLPLPSESGSNSYAPA
-C------------------LERKNERNA-------------EAKRKMALARERKTVKTLG
-IIMGTFILCWLPFFIVALVLPF-CESSCH-MPALLGAIINWLGYSNSLLNPVIYAYFNKD
-FQNAFKKII-----KCKFCR--R-------------------------------------
-------------------------------------------------------------
-------------------------------
->    34== L06803   1 Lymnaea stagnalis serotonin receptor <>[PNAS90,11-15'93]
-MANFTFGDLALDVARMGGLASTPSGLRSTGLTTPGLSPTGLVTSDFNDSYGLTGQFINGS
-HSSRSRDNASANDT------SATNM---TDDRYWSLTVYSHEHLVL-----TSVILGLFV
-LCCIIGNCFVIAAVMLERSLHNVANYLILSLAVADLMVAVLV-MPLSVVSEIS-KVWF--
-LHSEVCDMWISVDVLCCTASILHLVAIAMDRYWAVTS-IDYIRRRSARRILLMIMVVWIV
-ALFI-SIPPLF-GWRDPNN--DPDKTGTCIISQDK----------GYTIFSTVGAFYLPM
-LVMMIIYIRIWLVARSRIRKDKFQMTKARLKTEETTLVASPKTEYSVVSDCNGCNSPDST
-TEKKKRRAPFKSYGCSPRPERKKNRAKKLPENANGVNSNSSSSERLKQIQIETAEAFANG
-CAEEASIAMLERQCNNGKKISSNDTPYS-------------RTREKLELKRERKAARTLA
-IITGAFLICWLPFFIIALIGPF-VDPE-G-IPPFARSFVLWLGYFNSLLNPIIYTIFSPE
-FRSAFQKIL-----FGKYRRGHR-------------------------------------
-------------------------------------------------------------
-------------------------------
->    35=p A47174 serotonin receptor, 5HTlym receptor - great pond snail
-MANFTFGDLALDVARMGGLASTPSGLRSTGLTTPGLSPTGLVTSDFNDSYGLTGQFINGS
-HSSRSRDNASANDT------SATNM---TDDRYWSLTVYSHEHLVL-----TSVILGLFV
-LCCIIGNCFVIAAVMLERSLHNVANYLILSLAVADLMVAVLV-MPLSVVSEIS-KVWF--
-LHSEVCDMWISVDVLCCTASILHLVAIAMDRYWAVTS-IDYIRRRSARRILLMIMVVWIV
-ALFI-SIPPLF-GWRDPNN--DPDKTGTCIISQDK----------GYTIFSTVGAFYLPM
-LVMMIIYIRIWLVARSRIRKDKFQMTKARLKTEETTLVASPKTEYSVVSDCNGCNSPDST
-TEKKKRRAPFKSYGCSPRPERKKNRAKKLPENANGVNSNSSSSERLKQIQIETAEAFANG
-CAEEASIAMLERQCNNGKKISSNDTPYS-------------RTREKLELKRERKAARTLA
-IITGAFLICWLPFFIIALIGPF-VDPE-G-IPPFARSFVLWLGYFNSLLNPIIYTIFSPE
-FRSAFQKIL-----FGKYRRGHR-------------------------------------
-------------------------------------------------------------
-------------------------------
->    36== X95604   1 Bombyx mori serotonin receptor <antennae>[InsectBiochem.Mol.Bi
-MEG-AEGQEELDWEAL--------------------------------------------
-YLRLPLQNCSWNSTGWEPNWNVTVV---PNTTWWQASAPFDTPAALVRAAAKAVVLGLLI
-LATVVGNVFVIAAILLERHLRSAANNLILSLAVADLLVACLV-MPLGAVYEVV-QRWT--
-LGPELCDMWTSGDVLCCTASILHLVAIALDRYWAVTN-IDYIHASTAKRVGMMIACVWTV
-SFFV-CIAQLL-GWKDPDWNQRVSEDLRCVVSQDV----------GYQIFATASSFYVPV
-LIILILYWRIYQTARKRIRR------RRGATARGGVGPPPVPAG----------------
------------------GALVAGGGSGGIAAAVVAV-----IGRPLPTISETTTTGFTNV
-SSNNTSPE--KQSCANGLEADPPTTGYGAVAAAYYPSLVRRKPKEAADSKRERKAAKTLA
-IITGAFVACWLPFFVLAILVPT-CD--CE-VSPVLTSLSLWLGYFNSTLNPVIYTVFSPE
-FRHAFQRLL-----CGRRVRRRRA----------------------------------PQ
-------------------------------------------------------------
-------------------------------