Mac binaries
[jabaws.git] / website / archive / binaries / mac / src / mafft / test / sample.linsi
diff --git a/website/archive/binaries/mac/src/mafft/test/sample.linsi b/website/archive/binaries/mac/src/mafft/test/sample.linsi
new file mode 100644 (file)
index 0000000..252c31f
--- /dev/null
@@ -0,0 +1,468 @@
+>     1== M63632   1 Lampetra japonica rhodopsin <>[BBRC174,1125-1132'91]
+MN----------------------GTEGDNFYVPFSNKTGLA--RSPYEYPQY-------
+------------------YLAEPW-------------------KYSALAAYMFFLILVGF
+PVNFLTLFVTVQHKKLRTPLNYILLNLAMANLFMVLFG-FTVTMYTSMN-GYFV--FGPT
+MCSIEGFFATLGGEVALWSLVVLAIERYIVICKPMGNF-RFGNTHAIMGVAFTWIMALAC
+-AAPPLV-GWS-----RYIPEGMQCSCGPDYYTLNPNFNNESYVVYMFVVHFLVPFVIIF
+FCYGRLLCTVKEAAAAQQESA---------------------------------------
+------------------------------------------------------------
+------------------------------------------STQKAEKEVTRMVVLMVI
+GFLVCWVPYASVAFYIFT--HQGSD-FGATFMTLPAFFAKSSALYNPVIYILMNKQFRNC
+MITTL-----CCGKNPLGDDESG--AS-TSKTEVS-------------------------
+------------------------------------------------------------
+-SVS-TSPVSPA---
+>     2== U22180   1 rat opsin <rod>[J.Mol.Neurosci.5(3),207-209'94]
+MN----------------------GTEGPNFYVPFSNITGVV--RSPFEQPQY-------
+------------------YLAEPW-------------------QFSMLAAYMFLLIVLGF
+PINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGG-FTTTLYTSLH-GYFV--FGPT
+GCNLEGFFATLGGEIGLWSLVVLAIERYVVVCKPMSNF-RFGENHAIMGVAFTWVMALAC
+-AAPPLV-GWS-----RYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIF
+FCYGQLVFTVKEAAAQQQESA---------------------------------------
+------------------------------------------------------------
+------------------------------------------TTQKAEKEVTRMVIIMVI
+FFLICWLPYASVAMYIFT--HQGSN-FGPIFMTLPAFFAKTASIYNPIIYIMMNKQFRNC
+MLTSL-----CCGKNPLGDDEAS--AT-ASKTETS-------------------------
+------------------------------------------------------------
+-QVA-PA--------
+>     3== M92038   1 chicken green sensitive cone opsin <retina>[PNAS89,5932-5936'9
+MN----------------------GTEGINFYVPMSNKTGVV--RSPFEYPQY-------
+------------------YLAEPW-------------------KYRLVCCYIFFLISTGL
+PINLLTLLVTFKHKKLRQPLNYILVNLAVADLFMACFG-FTVTFYTAWN-GYFV--FGPV
+GCAVEGFFATLGGQVALWSLVVLAIERYIVVCKPMGNF-RFSATHAMMGIAFTWVMAFSC
+-AAPPLF-GWS-----RYMPEGMQCSCGPDYYTHNPDYHNESYVLYMFVIHFIIPVVVIF
+FSYGRLICKVREAAAQQQESA---------------------------------------
+------------------------------------------------------------
+------------------------------------------TTQKAEKEVTRMVILMVL
+GFMLAWTPYAVVAFWIFT--NKGAD-FTATLMAVPAFFSKSSSLYNPIIYVLMNKQFRNC
+MITTI-----CCGKNPFGDEDVSSTVS-QSKTEVS-------------------------
+------------------------------------------------------------
+-SVS-SSQVSPA---
+>     4=p A45229 opsin, green-sensitive (clone GFgr-1) - goldfish
+MN----------------------GTEGKNFYVPMSNRTGLV--RSPFEYPQY-------
+------------------YLAEPW-------------------QFKILALYLFFLMSMGL
+PINGLTLVVTAQHKKLRQPLNFILVNLAVAGTIMVCFG-FTVTFYTAIN-GYFV--LGPT
+GCAVEGFMATLGGEVALWSLVVLAIERYIVVCKPMGSF-KFSSSHAFAGIAFTWVMALAC
+-AAPPLF-GWS-----RYIPEGMQCSCGPDYYTLNPDYNNESYVIYMFVCHFILPVAVIF
+FTYGRLVCTVKAAAAQQQDSA---------------------------------------
+------------------------------------------------------------
+------------------------------------------STQKAEREVTKMVILMVF
+GFLIAWTPYATVAAWIFF--NKGAD-FSAKFMAIPAFFSKSSALYNPVIYVLLNKQFRNC
+MLTTI-----FCGKNPLGDDESS-TVS-TSKTEVS-------------------------
+------------------------------------------------------------
+-SVS-PA--------
+>     5=p B45229 opsin, green-sensitive (clone GFgr-2) - goldfish
+MN----------------------GTEGNNFYVPLSNRTGLV--RSPFEYPQY-------
+------------------YLAEPW-------------------QFKLLAVYMFFLICLGL
+PINGLTLICTAQHKKLRQPLNFILVNLAVAGAIMVCFG-FTVTFYTAIN-GYFA--LGPT
+GCAVEGFMATLGGEVALWSLVVLAIERYIVVCKPMGSF-KFSSTHASAGIAFTWVMAMAC
+-AAPPLV-GWS-----RYIPEGIQCSCGPDYYTLNPEYNNESYVLYMFICHFILPVTIIF
+FTYGRLVCTVKAAAAQQQDSA---------------------------------------
+------------------------------------------------------------
+------------------------------------------STQKAEREVTKMVILMVL
+GFLVAWTPYATVAAWIFF--NKGAA-FSAQFMAIPAFFSKTSALYNPVIYVLLNKQFRSC
+MLTTL-----FCGKNPLGDEESS-TVS-TSKTEVS-------------------------
+------------------------------------------------------------
+-SVS-PA--------
+>     6== L11864   1 Carassius auratus blue cone opsin <retina>[Biochemistry32,208-
+MK--------------------QVPEFHEDFYIPIPLDINNLSAYSPFLVPQD-------
+------------------HLGNQG-------------------IFMAMSVFMFFIFIGGA
+SINILTILCTIQFKKLRSHLNYILVNLSIANLFVAIFG-SPLSFYSFFN-RYFI--FGAT
+ACKIEGFLATLGGMVGLWSLAVVAFERWLVICKPLGNF-TFKTPHAIAGCILPWISALAA
+-SLPPLF-GWS-----RYIPEGLQCSCGPDWYTTNNKYNNESYVMFLFCFCFAVPFGTIV
+FCYGQLLITLKLAAKAQADSA---------------------------------------
+------------------------------------------------------------
+------------------------------------------STQKAEREVTKMVVVMVL
+GFLVCWAPYASFSLWIVS--HRGEE-FDLRMATIPSCLSKASTVYNPVIYVLMNKQFRSC
+MMKMV------CGKN-IEEDEAS--TS-SQVTQVS-------------------------
+------------------------------------------------------------
+-SVA-PEK-------
+>     7== M13299   1 human BCP <>[Science232(4747),193-202'86]
+MR----------------------KMSEEEFYL-----FKNISSVGPWDGPQY-------
+------------------HIAPVW-------------------AFYLQAAFMGTVFLIGF
+PLNAMVLVATLRYKKLRQPLNYILVNVSFGGFLLCIFS-VFPVFVASCN-GYFV--FGRH
+VCALEGFLGTVAGLVTGWSLAFLAFERYIVICKPFGNF-RFSSKHALTVVLATWTIGIGV
+-SIPPFF-GWS-----RFIPEGLQCSCGPDWYTVGTKYRSESYTWFLFIFCFIVPLSLIC
+FSYTQLLRALKAVAAQQQESA---------------------------------------
+------------------------------------------------------------
+------------------------------------------TTQKAEREVSRMVVVMVG
+SFCVCYVPYAAFAMYMVN--NRNHG-LDLRLVTIPSFFSKSACIYNPIIYCFMNKQFQAC
+IMKMV------CGKA---MTDESDTCS-SQKTEVS-------------------------
+------------------------------------------------------------
+-TVS-STQVGPN---
+>     8=opsin, greensensitive  human (fragment) S07060
+------------------------------------------------------------
+------------------------------------------------------------
+------------------------------DLAETVIA-STISIVNQVS-GYFV--LGHP
+MCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGNV-RFDAKLAIVGIAFSWIWAAVW
+-TAPPIF-GWS-----RYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCITPLSIIV
+LCYLQVWLAIRAVAKQQKESE---------------------------------------
+------------------------------------------------------------
+------------------------------------------STQKAEKEVTRMVVVMVL
+AFC---------------------------------------------------------
+------------------------------------------------------------
+------------------------------------------------------------
+---------------
+>     9== K03494   1 human GCP <>[Science232(4747),193-202'86]
+MAQQWSLQRLAGRHPQDS-YEDSTQ--SSIFTY-----TNSNSTRGPFEGPNY-------
+------------------HIAPRW-------------------VYHLTSVWMIFVVIASV
+FTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIA-STISVVNQVY-GYFV--LGHP
+MCVLEGYTVSLCGITGLWSLAIISWERWMVVCKPFGNV-RFDAKLAIVGIAFSWIWAAVW
+-TAPPIF-GWS-----RYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCITPLSIIV
+LCYLQVWLAIRAVAKQQKESE---------------------------------------
+------------------------------------------------------------
+------------------------------------------STQKAEKEVTRMVVVMVL
+AFCFCWGPYAFFACFAAA--NPGYP-FHPLMAALPAFFAKSATIYNPVIYVFMNRQFRNC
+ILQLF----------GKKVDDGSELSS-ASKTEVS-------------------------
+------------------------------------------------------------
+-SVS---SVSPA---
+>    10== Z68193   1 human Red Opsin <>[]
+MAQQWSLQRLAGRHPQDS-YEDSTQ--SSIFTY-----TNSNSTRGPFEGPNY-------
+------------------HIAPRW-------------------VYHLTSVWMIFVVTASV
+FTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIA-STISIVNQVS-GYFV--LGHP
+MCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGNV-RFDAKLAIVGIAFSWIWSAVW
+-TAPPIF-GWS-----RYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCIIPLAIIM
+LCYLQVWLAIRAVAKQQKESE---------------------------------------
+------------------------------------------------------------
+------------------------------------------STQKAEKEVTRMVVVMIF
+AYCVCWGPYTFFACFAAA--NPGYA-FHPLMAALPAYFAKSATIYNPVIYVFMNRQFRNC
+ILQLF----------GKKVDDGSELSS-ASKTEVS-------------------------
+------------------------------------------------------------
+-SVS---SVSPA---
+>    11== M92036   1 Gecko gecko P521 <retina>[PNAS89,6841-6845'92]
+MTEAWNVAVFAARRSRDD--DDTTR--GSVFTY-----TNTNNTRGPFEGPNY-------
+------------------HIAPRW-------------------VYNLVSFFMIIVVIASC
+FTNGLVLVATAKFKKLRHPLNWILVNLAFVDLVETLVA-STISVFNQIF-GYFI--LGHP
+LCVIEGYVVSSCGITGLWSLAIISWERWFVVCKPFGNI-KFDSKLAIIGIVFSWVWAWGW
+-SAPPIF-GWS-----RYWPHGLKTSCGPDVFSGSVELGCQSFMLTLMITCCFLPLFIII
+VCYLQVWMAIRAVAAQQKESE---------------------------------------
+------------------------------------------------------------
+------------------------------------------STQKAEREVSRMVVVMIV
+AFCICWGPYASFVSFAAA--NPGYA-FHPLAAALPAYFAKSATIYNPVIYVFMNRQFRNC
+IMQLF----------GKKVDDGSEAST-TSRTEVS-------------------------
+------------------------------------------------------------
+-SVS-NSSVAPA---
+>    12== M62903   1 chicken visual pigment <>[BBRC173,1212-1217'90]
+MA-AWE-AAFAARRRHEE--EDTTR--DSVFTY-----TNSNNTRGPFEGPNY-------
+------------------HIAPRW-------------------VYNLTSVWMIFVVAASV
+FTNGLVLVATWKFKKLRHPLNWILVNLAVADLGETVIA-STISVINQIS-GYFI--LGHP
+MCVVEGYTVSACGITALWSLAIISWERWFVVCKPFGNI-KFDGKLAVAGILFSWLWSCAW
+-TAPPIF-GWS-----RYWPHGLKTSCGPDVFSGSSDPGVQSYMVVLMVTCCFFPLAIII
+LCYLQVWLAIRAVAAQQKESE---------------------------------------
+------------------------------------------------------------
+------------------------------------------STQKAEKEVSRMVVVMIV
+AYCFCWGPYTFFACFAAA--NPGYA-FHPLAAALPAYFAKSATIYNPIIYVFMNRQFRNC
+ILQLF----------GKKVDDGSEVST--SRTEVS-------------------------
+------------------------------------------------------------
+-SVS-NSSVSPA---
+>    13== S75720   1 chicken P-opsin <>[Science267(5203),1502-1506'95]
+MS-------------------------------SNSSQAPPNGTPGPFDGPQWP------
+------------------YQAPQS-------------------TYVGVAVLMGTVVACAS
+VVNGLVIVVSICYKKLRSPLNYILVNLAVADLLVTLCG-SSVSLSNNIN-GFFV--FGRR
+MCELEGFMVSLTGIVGLWSLAILALERYVVVCKPLGDF-QFQRRHAVSGCAFTWGWALLW
+-SAPPLL-GWS-----SYVPEGLRTSCGPNWYTGGS--NNNSYILSLFVTCFVLPLSLIL
+FSYTNLLLTLRAAAAQQKEAD---------------------------------------
+------------------------------------------------------------
+------------------------------------------TTQRAEREVTRMVIVMVM
+AFLLCWLPYSTFALVVAT--HKGII-IQPVLASLPSYFSKTATVYNPIIYVFMNKQFQSC
+LLEML-----CCGYQPQRTGKASPGTP-GPHADVT-------------------------
+------------------------------------------------------------
+-AAGLRNKVMPAHPV
+>    14== M17718   1 D.melanogaster Rh3 <>[J.Neurosci.7,1550-1557'87]
+MESGNVSSSLFGNVSTALRPEARLSAE----------TRLLGWNVPPEELR---------
+------------------HIPEHWLTYP----------EPPESMNYLLGTLYIFFTLMSM
+LGNGLVIWVFSAAKSLRTPSNILVINLAFCDFMMMVK--TPIFIYNSFH-QGYA--LGHL
+GCQIFGIIGSYTGIAAGATNAFIAYDRFNVITRPMEG--KMTHGKAIAMIIFIYMYATPW
+-VVACYTETWG-----RFVPEGYLTSCTFDYLTDN--FDTRLFVACIFFFSFVCPTTMIT
+YYYSQIVGHVFSHEKALRDQAKKMNVESLR------------------------------
+------------------------------------------------------------
+-------------------------------------SNVDKNKETAEIRIAKAAITICF
+LFFCSWTPYGVMSLIGAF--GDKTL-LTPGATMIPACACKMVACIDPFVYAISHPRYRME
+LQKRCPWL--ALNEKAPESSAVASTST-TQEPQQT-------------------------
+------------------------------------------------------------
+-TAA-----------
+>    15== X65879   1 Drosophila pseudoobscura Dpse\Rh3 <>[Genetics132(1),193-204'92
+MEYHNVSSVL-GNVSSVLRPDARLSAE----------SRLLGWNVPPDELR---------
+------------------HIPEHWLIYP----------EPPESMNYLLGTLYIFFTVISM
+IGNGLVMWVFSAAKSLRTPSNILVINLAFCDFMMMIK--TPIFIYNSFH-QGYA--LGHL
+GCQIFGVIGSYTGIAAGATNAFIAYDRYNVITRPMEG--KMTHGKAIAMIIFIYLYATPW
+-VVACYTESWG-----RFVPEGYLTSCTFDYLTDN--FDTRLFVACIFFFSFVCPTTMIT
+YYYSQIVGHVFSHEKALRDQAKKMNVDSLR------------------------------
+------------------------------------------------------------
+-------------------------------------SNVDKSKEAAEIRIAKAAITICF
+LFFASWTPYGVMSLIGAF--GDKTL-LTPGATMIPACTCKMVACIDPFVYAISHPRYRME
+LQKRCPWL--AISEKAPESRAAISTST-TQEQQQT-------------------------
+------------------------------------------------------------
+-TAA-----------
+>    16== M17730   1 D.melanogaster Rh4 opsin <>[J.Neurosci.7,1558-1566'87]
+ME------PLCNASEPPLRPEAR-SSGNGD-------LQFLGWNVPPDQIQ---------
+------------------YIPEHWLTQL----------EPPASMHYMLGVFYIFLFCAST
+VGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDLIMCLK--APIF--NSFH-RGFAIYLGNT
+WCQIFASIGSYSGIGAGMTNAAIGYDRYNVITKPMNR--NMTFTKAVIMNIIIWLYCTPW
+-VVLPLTQFWD-----RFVPEGYLTSCSFDYLSDN--FDTRLFVGTIFFFSFVCPTLMIL
+YYYSQIVGHVFSHEKALREQAKKMNVESLR------------------------------
+------------------------------------------------------------
+-------------------------------------SNVDKSKETAEIRIAKAAITICF
+LFFVSWTPYGVMSLIGAF--GDKSL-LTQGATMIPACTCKLVACIDPFVYAISHPRYRLE
+LQKRCPWL--GVNEKSGEISSAQSTTT-QEQQQTT-------------------------
+------------------------------------------------------------
+-AA------------
+>    17== X65880   1 Drosophila pseudoobscura Dpse\Rh4 <>[Genetics132(1),193-204'92
+MD------ALCNASEPPLRPEARMSSGSDE-------LQFLGWNVPPDQIQ---------
+------------------YIPEHWLTQL----------EPPASMHYMLGVFYIFLFFAST
+LGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDLIMCLK--APIFIYNSFH-RGFA--LGNT
+WCQIFASIGSYSGIGAGMTNAAIGYDRYNVITKPMNR--NMTFTKAVIMNIIIWLYCTPW
+-VVLPLTQFWD-----RFVPEGYLTSCSFDYLSDN--FDTRLFVGTIFLFSFVVPTLMIL
+YYYSQIVGHVFNHEKALREQAKKMNVESLR------------------------------
+------------------------------------------------------------
+-------------------------------------SNVDKSKETAEIRIAKAAITICF
+LFFVSWTPYGVMSLIGAF--GDKSL-LTPGATMIPACTCKLVACIEPFVYAISHPRYRME
+LQKRCPWL--GVNEKSGEASSAQSTTT-QEQTQQT-------------------------
+------------------------------------------------------------
+-SAA-----------
+>    18== D50584   1 Hemigrapsus sanguineus opsin BcRh2 <compound eye>[J.Exp.Biol.1
+M-----------TNATGPQMAYYGAASMDFGYPE---GVSIVDFVRPEIKP---------
+------------------YVHQHWYNYP----------PVNPMWHYLLGVIYLFLGTVSI
+FGNGLVIYLFNKSAALRTPANILVVNLALSDLIMLTTN-VPFFTYNCFSGGVWM--FSPQ
+YCEIYACLGAITGVCSIWLLCMISFDRYNIICNGFNGP-KLTTGKAVVFALISWVIAIGC
+-ALPPFF-GWG-----NYILEGILDSCSYDYLTQD--FNTFSYNIFIFVFDYFLPAAIIV
+FSYVFIVKAIFAHEAAMRAQAKKMNVSTLR------------------------------
+------------------------------------------------------------
+-------------------------------------S-NEADAQRAEIRIAKTALVNVS
+LWFICWTPYALISLKGVM--GDTSG-ITPLVSTLPALLAKSCSCYNPFVYAISHPKYRLA
+ITQHLPWF--CVHETETKSNDDSQSNS-TVAQDKA-------------------------
+------------------------------------------------------------
+---------------
+>    19== D50583   1 Hemigrapsus sanguineus opsin BcRh1 <compound eye>[J.Exp.Biol.1
+M-----------ANVTGPQMAFYGSGAATFGYPE---GMTVADFVPDRVKH---------
+------------------MVLDHWYNYP----------PVNPMWHYLLGVVYLFLGVISI
+AGNGLVIYLYMKSQALKTPANMLIVNLALSDLIMLTTN-FPPFCYNCFSGGRWM--FSGT
+YCEIYAALGAITGVCSIWTLCMISFDRYNIICNGFNGP-KLTQGKATFMCGLAWVISVGW
+-SLPPFF-GWG-----SYTLEGILDSCSYDYFTRD--MNTITYNICIFIFDFFLPASVIV
+FSYVFIVKAIFAHEAAMRAQAKKMNVTNLR------------------------------
+------------------------------------------------------------
+-------------------------------------S-NEAETQRAEIRIAKTALVNVS
+LWFICWTPYAAITIQGLL--GNAEG-ITPLLTTLPALLAKSCSCYNPFVYAISHPKFRLA
+ITQHLPWF--CVHEKDPNDVEENQSSN-TQTQEKS-------------------------
+------------------------------------------------------------
+---------------
+>    20== K02320   1 D.melanogaster opsin <>[Cell40,851-858'85]
+ME-----SFAVAAAQLGPHFAPLS-------------NGSVVDKVTPDMAH---------
+------------------LISPYWNQFP----------AMDPIWAKILTAYMIMIGMISW
+CGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-TPMMGINLYF-ETWV--LGPM
+MCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAGR-PMTIPLALGKM----------
+-----------------YVPEGNLTSCGIDYLERD--WNPRSYLIFYSIFVYYIPLFLIC
+YSYWFIIAAVSAHEKAMREQAKKMNVKSLR------------------------------
+------------------------------------------------------------
+-------------------------------------S-SEDAEKSAEGKLAKVALVTIT
+LWFMAWTPYLVINCMGLF---KFEG-LTPLNTIWGACFAKSAACYNPIVYGISHPKYRLA
+LKEKCPCC--VFGKVDDGKSSDAQSQA-TASEAESKA-----------------------
+------------------------------------------------------------
+---------------
+>    21== K02315   1 D.melanogaster ninaE <>[Cell40,839-850'85]
+ME-----SFAVAAAQLGPHFAPLS-------------NGSVVDKVTPDMAH---------
+------------------LISPYWNQFP----------AMDPIWAKILTAYMIMIGMISW
+CGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-TPMMGINLYF-ETWV--LGPM
+MCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAGR-PMTIPLALGKIAYIWFMSSIW
+-CLAPAF-GWS-----RYVPEGNLTSCGIDYLERD--WNPRSYLIFYSIFVYYIPLFLIC
+YSYWFIIAAVSAHEKAMREQAKKMNVKSLR------------------------------
+------------------------------------------------------------
+-------------------------------------S-SEDAEKSAEGKLAKVALVTIT
+LWFMAWTPYLVINCMGLF---KFEG-LTPLNTIWGACFAKSAACYNPIVYGISHPKYRLA
+LKEKCPCC--VFGKVDDGKSSDAQSQA-TASEAESKA-----------------------
+------------------------------------------------------------
+---------------
+>    22== X65877   1 Drosophila pseudoobscura Dpse\ninaE <>[Genetics132(1),193-204'
+MD-----SFAAVATQLGPQFAAPS-------------NGSVVDKVTPDMAH---------
+------------------LISPYWDQFP----------AMDPIWAKILTAYMIIIGMISW
+CGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-TPMMGINLYF-ETWV--LGPM
+MCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAGR-PMTIPLALGKIAYIWFMSTIW
+CCLAPVF-GWS-----RYVPEGNLTSCGIDYLERD--WNPRSYLIFYSIFVYYIPLFLIC
+YSYWFIIAAVSAHEKAMREQAKKMNVKSLR------------------------------
+------------------------------------------------------------
+-------------------------------------S-SEDADKSAEGKLAKVALVTIS
+LWFMAWTPYLVINCMGLF---KFEG-LTPLNTIWGACFAKSAACYNPIVYGISHPKYRLA
+LKEKCPCC--VFGKVDDGKSSEAQSQA-TTSEAESKA-----------------------
+------------------------------------------------------------
+---------------
+>    23== M12896   1 D.melanogaster Rh2 <>[Cell44,705-710'86]
+MERSHLPETPFDLAHSGPRFQAQSSG-----------NGSVLDNVLPDMAH---------
+------------------LVNPYWSRFA----------PMDPMMSKILGLFTLAIMIISC
+CGNGVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMASQ-SPVMIINFYY-ETWV--LGPL
+WCDIYAGCGSLFGCVSIWSMCMIAFDRYNVIVKGINGT-PMTIKTSIMKILFIWMMAVFW
+-TVMPLI-GWS-----AYVPEGNLTACSIDYMTRM--WNPRSYLITYSLFVYYTPLFLIC
+YSYWFIIAAVAAHEKAMREQAKKMNVKSLR------------------------------
+------------------------------------------------------------
+-------------------------------------S-SEDCDKSAEGKLAKVALTTIS
+LWFMAWTPYLVICYFGLF---KIDG-LTPLTTIWGATFAKTSAVYNPIVYGISHPKYRIV
+LKEKCPMC--VFGNTDEPKPDAPASDTETTSEADSKA-----------------------
+------------------------------------------------------------
+---------------
+>    24== X65878   1 Drosophila pseudoobscura Dpse\Rh2 <>[Genetics132(1),193-204'92
+MERSLLPEPPLAMALLGPRFEAQTGG-----------NRSVLDNVLPDMAP---------
+------------------LVNPHWSRFA----------PMDPTMSKILGLFTLVILIISC
+CGNGVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMASQ-SPVMIINFYY-ETWV--LGPL
+WCDIYAACGSLFGCVSIWSMCMIAFDRYNVIVKGINGT-PMTIKTSIMKIAFIWMMAVFW
+-TIMPLI-GWS-----SYVPEGNLTACSIDYMTRQ--WNPRSYLITYSLFVYYTPLFMIC
+YSYWFIIATVAAHEKAMRDQAKKMNVKSLR------------------------------
+------------------------------------------------------------
+-------------------------------------S-SEDCDKSAENKLAKVALTTIS
+LWFMAWTPYLIICYFGLF---KIDG-LTPLTTIWGATFAKTSAVYNPIVYGISHPNDRLV
+LKEKCPMC--VCGTTDEPKPDAPPSDTETTSEAESKD-----------------------
+------------------------------------------------------------
+---------------
+>    25== U26026   1 Apis mellifera long-wavelength rhodopsin <>[]
+M-----------IAVSGPSYEAFSYGGQARFN-----NQTVVDKVPPDMLH---------
+------------------LIDANWYQYP----------PLNPMWHGILGFVIGMLGFVSA
+MGNGMVVYIFLSTKSLRTPSNLFVINLAISNFLMMFCM-SPPMVINCYY-ETWV--LGPL
+FCQIYAMLGSLFGCGSIWTMTMIAFDRYNVIVKGLSGK-PLSINGALIRIIAIWLFSLGW
+-TIAPMF-GWN-----RYVPEGNMTACGTDYFNRG--LLSASYLVCYGIWVYFVPLFLII
+YSYWFIIQAVAAHEKNMREQAKKMNVASLR------------------------------
+------------------------------------------------------------
+-------------------------------------S-SENQNTSAECKLAKVALMTIS
+LWFMAWTPYLVINFSGIF---NLVK-ISPLFTIWGSLFAKANAVYNPIVYGISHPKYRAA
+LFAKFPSL--ACAA-EPSSDAVSTTSG-TTTVTDNEKSNA--------------------
+------------------------------------------------------------
+---------------
+>    26== L03781   1 Limulus polyphemus opsin <>[PNAS90,6150-6154'93]
+M------ANQLSYSSLGWPYQP---------------NASVVDTMPKEMLY---------
+------------------MIHEHWYAFP----------PMNPLWYSILGVAMIILGIICV
+LGNGMVIYLMMTTKSLRTPTNLLVVNLAFSDFCMMAFM-MPTMTSNCFA-ETWI--LGPF
+MCEVYGMAGSLFGCASIWSMVMITLDRYNVIVRGMAAA-PLTHKKATLLLLFVWIWSGGW
+-TILPFF-GWS-----RYVPEGNLTSCTVDYLTKD--WSSASYVVIYGLAVYFLPLITMI
+YCYFFIVHAVAEHEKQLREQAKKMNVASLR------------------------------
+------------------------------------------------------------
+-------------------------------------ANADQQKQSAECRLAKVAMMTVG
+LWFMAWTPYLIISWAGVF--SSGTR-LTPLATIWGSVFAKANSCYNPIVYGISHPRYKAA
+LYQRFPSL--ACGSGESGSDVKSEASA-TTTMEEKPKIPEA-------------------
+------------------------------------------------------------
+---------------
+>    27== X07797   1 Octopus dofleini rhodopsin <>[FEBS232(1),69-72'88]
+M-------------------------------VESTTLVNQTWWYNPTV-----------
+------------------DIHPHWAKFD----------PIPDAVYYSVGIFIGVVGIIGI
+LGNGVVIYLFSKTKSLQTPANMFIINLAMSDLSFSAINGFPLKTISAFM-KKWI--FGKV
+ACQLYGLLGGIFGFMSINTMAMISIDRYNVIGRPMAASKKMSHRRAFLMIIFVWMWSIVW
+-SVGPVF-NWG-----AYVPEGILTSCSFDYLSTD--PSTRSFILCMYFCGFMLPIIIIA
+FCYFNIVMSVSNHEKEMAAMAKRLNAKELR------------------------------
+------------------------------------------------------------
+---------------------------------------KAQAGASAEMKLAKISMVIIT
+QFMLSWSPYAIIALLAQF--GPAEW-VTPYAAELPVLFAKASAIHNPIVYSVSHPKFREA
+IQTTFPWLLTCCQFDEKECEDANDAEE-EVVASER--GGESRDAAQMKEMMAMMQKMQAQ
+QAAYQP---PPPPQGYPPQGYPPQGAYPPPQGYPPQGYPPQGYPPQGYPPQGAPPQVEAP
+QGAPPQGVDNQAYQA
+>    28== X70498   1 Todarodes pacificus rhodopsin <retina>[FEBS317(1-2),5-11'93]
+M--------------------------------GRDLRDNETWWYNPSI-----------
+------------------VVHPHWREFD----------QVPDAVYYSLGIFIGICGIIGC
+GGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFL-KKWI--FGFA
+ACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLW
+-AIGPIF-GWG-----AYTLEGVLCNCSFDYISRD--STTRSNILCMFILGFFGPILIIF
+FCYFNIVMSVSNHEKEMAAMAKRLNAKELR------------------------------
+------------------------------------------------------------
+---------------------------------------KAQAGANAEMRLAKISIVIVS
+QFLLSWSPYAVVALLAQF--GPLEW-VTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREA
+ISQTFPWVLTCCQFDDKETEDDKDAET-EIPAGESSDAAPSADAAQMKEMMAMMQKMQQQ
+QAAYPPQGYAPPPQGYPPQGYPPQGY--PPQGYPPQGYPP---PPQGAPPQGAPP-----
+-AAPPQGVDNQAYQA
+>    29== L21195   1 human serotonin 5-HT7 receptor protein <placenta and fetal bra
+MMDVNSSGRPDLYGHLRSFLLPEVGRGLPDLSPDGGADPVAGSWAPHLLS---EVTA---
+------------------SPAPTWDAPPDNASGCGEQINYGRVEKVVIGSILTLITLLTI
+AGNCLVVISVCFVKKLRQPSNYLIVSLALADLSVAVAV-MPFVSVTDLIGGKWI--FGHF
+FCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAKMILSVWLLSASI
+-TLPPLF-GWA-----QNVNDDKVCLISQDF----------GYTIYSTAVAFYIPMSVML
+FMYYQIYKAARKSAAKHKFP--------------GFPRVEPDSVIALNGIVKLQKEVEE-
+------------------------------------------------------------
+---------------------------CANLSRLLKHERKNISIFKREQKAATTLGIIVG
+AFTVCWLPFFLLSTARPFICGTSCSCIPLWVERTFLWLGYANSLINPFIYAFFNRDLRTT
+YRSLL-----QCQYRNINRKLSAAGMH-EALKLAERPERPEFVLQNADYCRKKGHDS---
+------------------------------------------------------------
+---------------
+>    30== L15228   1 rat 5HT-7 serotonin receptor <>[JBC268,18200-18204'93]
+M--------------------------------------------PHLLSGFLEVTA---
+------------------SPAPTWDAPPDNVSGCGEQINYGRVEKVVIGSILTLITLLTI
+AGNCLVVISVSFVKKLRQPSNYLIVSLALADLSVAVAV-MPFVSVTDLIGGKWI--FGHF
+FCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAKMILSVWLLSASI
+-TLPPLF-GWA-----QNVNDDKVCLISQDF----------GYTIYSTAVAFYIPMSVML
+FMYYQIYKAARKSAAKHKFP--------------GFPRVQPESVISLNGVVKLQKEVEE-
+------------------------------------------------------------
+---------------------------CANLSRLLKHERKNISIFKREQKAATTLGIIVG
+AFTVCWLPFFLLSTARPFICGTSCSCIPLWVERTCLWLGYANSLINPFIYAFFNRDLRPT
+SRSLL-----QCQYRNINRKLSAAGMH-EALKLAERPERSEFVLQNSDHCGKKGHDT---
+------------------------------------------------------------
+---------------
+>    31=p A47425 serotonin receptor 5HT-7 - rat
+M--------------------------------------------PHLLSGFLEVTA---
+------------------SPAPTWDAPPDNVSGCGEQINYGRVEKVVIGSILTLITLLTI
+AGNCLVVISVSFVKKLRQPSNYLIVSLALADLSVAVAV-MPFVSVTDLIGGKWI--FGHF
+FCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAKMILSVWLLSASI
+-TLPPLF-GWA-----QNVNDDKVCLISQDF----------GYTIYSTAVAFYIPMSVML
+FMYYQIYKAARKSAAKHKFP--------------GFPRVQPESVISLNGVVKLQKEVEE-
+------------------------------------------------------------
+---------------------------CANLSRLLKHERKNISIFKREQKAATTLGIIVG
+AFTVCWLPFFLLSTARPFICGTSCSCIPLWVERTCLWLGYANSLINPFIYAFFNRDLRTT
+YRSLL-----QCQYRNINRKLSAAGMH-EALKLAERPERSEFVLQNSDHCGKKGHDT---
+------------------------------------------------------------
+---------------
+>    32== M83181   1 human serotonin receptor <>[JBC267(11),7553-7562'92]
+MDVLSPGQGNNTTSPPAPF-----------------------------------------
+------------------ETGGNTTGIS----------DVTVSYQVITSLLLGTLIFCAV
+LGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLV-LPMAALYQVL-NKWT--LGQV
+TCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVNKRTPRRAAALISLTWLIGFLI
+-SIPPML-GWRTP---EDRSDPDACTISKDH----------GYTIYSTFGAFYIPLLLML
+VLYGRIFRAARFRIRKTVKKVEKTGADTRHGASPAPQPKKS---------VNGESGSRNW
+RLGVESKAGGALCANGAVRQGDDGAALEVIEVHRVGNSKEHLPLPSEAGPTPCAPASFER
+KNERNA-------------------------------EAKRKMALARERKTVKTLGIIMG
+TFILCWLPFFIVALVLPF-CESSCH-MPTLLGAIINWLGYSNSLLNPVIYAYFNKDFQNA
+FKKII-----KCKFCRQ-------------------------------------------
+------------------------------------------------------------
+---------------
+>    33=p A35181 serotonin receptor class 1A - rat
+MDVFSFGQGNNTTASQEPF-----------------------------------------
+------------------GTGGNVTSIS----------DVTFSYQVITSLLLGTLIFCAV
+LGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLV-LPMAALYQVL-NKWT--LGQV
+TCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVNKRTPRRAAALISLTWLIGFLI
+-SIPPML-GWRTP---EDRSDPDACTISKDH----------GYTIYSTFGAFYIPLLLML
+VLYGRIFRAARFRIRKTVRKVEKKGAGTSLGTSSAPPPKKS---------LNGQPGSGDW
+RRCAENRAVGTPCTNGAVRQGDDEATLEVIEVHRVGNSKEHLPLPSESGSNSYAPACLER
+KNERNA-------------------------------EAKRKMALARERKTVKTLGIIMG
+TFILCWLPFFIVALVLPF-CESSCH-MPALLGAIINWLGYSNSLLNPVIYAYFNKDFQNA
+FKKII-----KCKFCRR-------------------------------------------
+------------------------------------------------------------
+---------------
+>    34== L06803   1 Lymnaea stagnalis serotonin receptor <>[PNAS90,11-15'93]
+MANFTFGDLALDVARMGGLASTPSGLRSTGLTTPGLSPTGLVTSDFNDSYGLTGQFINGS
+HSSRSRDNASANDTSATNMTDDRYWSLT----------VYSHEHLVLTSVILGLFVLCCI
+IGNCFVIAAVMLERSLHNVANYLILSLAVADLMVAVLV-MPLSVVSEIS-KVWF--LHSE
+VCDMWISVDVLCCTASILHLVAIAMDRYWAVTS-IDYIRRRSARRILLMIMVVWIVALFI
+-SIPPLF-GWRDP--NNDPDKTGTCIISQDK----------GYTIFSTVGAFYLPMLVMM
+IIYIRIWLVARSRIRKDKFQMTKARLKTEETTLVASPKTEYSVVSDCNGCNSPDSTTEKK
+KRRAPFKSYGCSPRPERKKNRAKKLPENANGVNSNSSSSERLKQIQIETAEAFANGCAEE
+ASIAMLERQCNNGKKISSNDTPYS-------------RTREKLELKRERKAARTLAIITG
+AFLICWLPFFIIALIGPF--VDPEG-IPPFARSFVLWLGYFNSLLNPIIYTIFSPEFRSA
+FQKIL-----FGKYRRGHR-----------------------------------------
+------------------------------------------------------------
+---------------
+>    35=p A47174 serotonin receptor, 5HTlym receptor - great pond snail
+MANFTFGDLALDVARMGGLASTPSGLRSTGLTTPGLSPTGLVTSDFNDSYGLTGQFINGS
+HSSRSRDNASANDTSATNMTDDRYWSLT----------VYSHEHLVLTSVILGLFVLCCI
+IGNCFVIAAVMLERSLHNVANYLILSLAVADLMVAVLV-MPLSVVSEIS-KVWF--LHSE
+VCDMWISVDVLCCTASILHLVAIAMDRYWAVTS-IDYIRRRSARRILLMIMVVWIVALFI
+-SIPPLF-GWRDP--NNDPDKTGTCIISQDK----------GYTIFSTVGAFYLPMLVMM
+IIYIRIWLVARSRIRKDKFQMTKARLKTEETTLVASPKTEYSVVSDCNGCNSPDSTTEKK
+KRRAPFKSYGCSPRPERKKNRAKKLPENANGVNSNSSSSERLKQIQIETAEAFANGCAEE
+ASIAMLERQCNNGKKISSNDTPYS-------------RTREKLELKRERKAARTLAIITG
+AFLICWLPFFIIALIGPF--VDPEG-IPPFARSFVLWLGYFNSLLNPIIYTIFSPEFRSA
+FQKIL-----FGKYRRGHR-----------------------------------------
+------------------------------------------------------------
+---------------
+>    36== X95604   1 Bombyx mori serotonin receptor <antennae>[InsectBiochem.Mol.Bi
+MEGAEGQEELDWEALYLRLPLQNCSWNSTGWEPNWNVTV---------------------
+------------------VPNTTWWQASAPF-----DTPAALVRAAAKAVVLGLLILATV
+VGNVFVIAAILLERHLRSAANNLILSLAVADLLVACLV-MPLGAVYEVV-QRWT--LGPE
+LCDMWTSGDVLCCTASILHLVAIALDRYWAVTN-IDYIHASTAKRVGMMIACVWTVSFFV
+-CIAQLL-GWKDPDWNQRVSEDLRCVVSQDV----------GYQIFATASSFYVPVLIIL
+ILYWRIYQTARKRIRRRRGATARGGV--------GPPPVPAGGALVAGGGSGG-------
+-----------------------------IAAAVVAVIGRPLPTISETTTTGFTNVSSNN
+TSPE--KQSCANGLEADPPTTGYGAVAAAYYPSLVRRKPKEAADSKRERKAAKTLAIITG
+AFVACWLPFFVLAILVPT---CDCE-VSPVLTSLSLWLGYFNSTLNPVIYTVFSPEFRHA
+FQRLL-----CGRRVRRRRAPQ--------------------------------------
+------------------------------------------------------------
+---------------