git://source.jalview.org / jabaws.git / blobdiff
? search:
summary | shortlog | log | commit | commitdiff | tree
raw | inline | side by side
Delete unneeded directory
[jabaws.git] / website / archive / binaries / mac / src / muscle / html.cpp
diff --git a/website/archive/binaries/mac/src/muscle/html.cpp b/website/archive/binaries/mac/src/muscle/html.cpp
deleted file mode 100644 (file)
index 8ef9438..0000000
--- a/website/archive/binaries/mac/src/muscle/html.cpp
+++ /dev/null
@@ -1,136 +0,0 @@
-#include "muscle.h"\r
-#include <stdio.h>\r
-#include <ctype.h>\r
-#include "msa.h"\r
-#include "textfile.h"\r
-\r
-const unsigned uCharsPerLine = 60;\r
-const int MIN_NAME = 10;\r
-const int MAX_NAME = 32;\r
-\r
-extern void AssignColors(const MSA &a, int **Colors);\r
-\r
-static int **MakeColors(const MSA &a)\r
-       {\r
-       const unsigned uSeqCount = a.GetSeqCount();\r
-       const unsigned uColCount = a.GetColCount();\r
-\r
-       int **Colors = new int *[uSeqCount];\r
-       for (unsigned i = 0; i < uSeqCount; ++i)\r
-               {\r
-               Colors[i] = new int[uColCount];\r
-               memset(Colors[i], 0, uColCount*sizeof(int));\r
-               }\r
-       AssignColors(a, Colors);\r
-       return Colors;\r
-       }\r
-\r
-static void ChangeColor(TextFile &File, int From, int To)\r
-       {\r
-       if (From == To)\r
-               return;\r
-\r
-#define        COLOR_WHITE             "FFFFFF"\r
-#define        COLOR_GRAY              "C0C0C0"\r
-#define        COLOR_BLACK             "000000"\r
-#define COLOR_RED              "FF0000"\r
-#define COLOR_GREEN            "00FF00"\r
-#define COLOR_BLUE             "5590FF"\r
-#define COLOR_LIGHTBLUE        "77FFFF"\r
-\r
-#define X(c)   File.PutString("</SPAN><SPAN STYLE=\"background-color:#" c "\">");\r
-       switch (To)\r
-               {\r
-       case 0:\r
-               X(COLOR_WHITE)\r
-               break;\r
-       case 1:\r
-               X(COLOR_GRAY)\r
-               break;\r
-       case 2:\r
-               X(COLOR_BLUE)\r
-               break;\r
-       case 3:\r
-               X(COLOR_LIGHTBLUE)\r
-               break;\r
-               }\r
-       }\r
-\r
-#define COLOR_WINDOW "FFEEE0"\r
-\r
-void MSA::ToHTMLFile(TextFile &File) const\r
-       {\r
-       File.PutString("<HTML>\n");\r
-       File.PutString("<BODY BGCOLOR=\"#" COLOR_WINDOW "\">\n");\r
-       File.PutString("<PRE>");\r
-\r
-       int **Colors = MakeColors(*this);\r
-\r
-       int iLongestNameLength = 0;\r
-       for (unsigned uSeqIndex = 0; uSeqIndex < GetSeqCount(); ++uSeqIndex)\r
-               {\r
-               const char *ptrName = GetSeqName(uSeqIndex);\r
-               const char *ptrBlank = strchr(ptrName, ' ');\r
-               int iLength;\r
-               if (0 != ptrBlank)\r
-                       iLength = (int) (ptrBlank - ptrName);\r
-               else\r
-                       iLength = (int) strlen(ptrName);\r
-               if (iLength > iLongestNameLength)\r
-                       iLongestNameLength = iLength;\r
-               }\r
-       if (iLongestNameLength > MAX_NAME)\r
-               iLongestNameLength = MAX_NAME;\r
-       if (iLongestNameLength < MIN_NAME)\r
-               iLongestNameLength = MIN_NAME;\r
-\r
-       unsigned uLineCount = (GetColCount() - 1)/uCharsPerLine + 1;\r
-       int CurrentColor = -1;\r
-       for (unsigned uLineIndex = 0; uLineIndex < uLineCount; ++uLineIndex)\r
-               {\r
-               File.PutString("\n");\r
-               unsigned uStartColIndex = uLineIndex*uCharsPerLine;\r
-               unsigned uEndColIndex = uStartColIndex + uCharsPerLine - 1;\r
-               if (uEndColIndex >= GetColCount())\r
-                       uEndColIndex = GetColCount() - 1;\r
-               char Name[MAX_NAME+1];\r
-               for (unsigned uSeqIndex = 0; uSeqIndex < GetSeqCount(); ++uSeqIndex)\r
-                       {\r
-                       const char *ptrName = GetSeqName(uSeqIndex);\r
-                       const char *ptrBlank = strchr(ptrName, ' ');\r
-                       int iLength;\r
-                       if (0 != ptrBlank)\r
-                               iLength = (int) (ptrBlank - ptrName);\r
-                       else\r
-                               iLength = (int) strlen(ptrName);\r
-                       if (iLength > MAX_NAME)\r
-                               iLength = MAX_NAME;\r
-                       memset(Name, ' ', MAX_NAME);\r
-                       memcpy(Name, ptrName, iLength);\r
-                       Name[iLongestNameLength] = 0;\r
-\r
-//                     File.PutString("<FONT COLOR=\"#000000\">");\r
-                       CurrentColor = -1;\r
-                       File.PutString("<SPAN STYLE=\"background-color:#" COLOR_WINDOW "\">");\r
-                       File.PutFormat("%s      ", Name);\r
-                       File.PutString("<SPAN STYLE=\"background-color:#FFFFFF\">");\r
-                       for (unsigned uColIndex = uStartColIndex; uColIndex <= uEndColIndex;\r
-                         ++uColIndex)\r
-                               {\r
-                               const int Color = Colors[uSeqIndex][uColIndex];\r
-                               ChangeColor(File, CurrentColor, Color);\r
-                               CurrentColor = Color;\r
-                               const char c = GetChar(uSeqIndex, uColIndex);\r
-                               if (Color == 0)\r
-                                       File.PutFormat("%c", tolower(c));\r
-                               else\r
-                                       File.PutFormat("%c", toupper(c));\r
-                               }\r
-                       File.PutString("\n");\r
-                       }\r
-               }\r
-       File.PutString("</SPAN>\n");\r
-       File.PutString("</PRE>\n");\r
-       File.PutString("</BODY>\n");\r
-       File.PutString("</HTML>\n");\r
-       }\r