Delete unneeded directory

[jabaws.git] / website / archive / binaries / mac / src / muscle / params.h

diff --git a/website/archive/binaries/mac/src/muscle/params.h b/website/archive/binaries/mac/src/muscle/params.h
deleted file mode 100644 (file)
index aefea32..0000000
--- a/website/archive/binaries/mac/src/muscle/params.h
+++ /dev/null
@@ -1,118 +0,0 @@
-#ifndef params_h\r
-#define params_h\r
-\r
-extern const char *g_pstrInFileName;\r
-extern const char *g_pstrOutFileName;\r
-\r
-extern const char *g_pstrFASTAOutFileName;\r
-extern const char *g_pstrMSFOutFileName;\r
-extern const char *g_pstrClwOutFileName;\r
-extern const char *g_pstrClwStrictOutFileName;\r
-extern const char *g_pstrHTMLOutFileName;\r
-extern const char *g_pstrPHYIOutFileName;\r
-extern const char *g_pstrPHYSOutFileName;\r
-extern const char *g_pstrDistMxFileName1;\r
-extern const char *g_pstrDistMxFileName2;\r
-\r
-extern const char *g_pstrFileName1;\r
-extern const char *g_pstrFileName2;\r
-\r
-extern const char *g_pstrSPFileName;\r
-extern const char *g_pstrMatrixFileName;\r
-\r
-extern const char *g_pstrUseTreeFileName;\r
-extern bool g_bUseTreeNoWarn;\r
-\r
-extern const char *g_pstrComputeWeightsFileName;\r
-extern const char *g_pstrScoreFileName;\r
-\r
-extern SCORE g_scoreGapOpen;\r
-extern SCORE g_scoreCenter;\r
-extern SCORE g_scoreGapExtend;\r
-extern SCORE g_scoreGapAmbig;\r
-\r
-#if    DOUBLE_AFFINE\r
-extern SCORE g_scoreGapOpen2;\r
-extern SCORE g_scoreGapExtend2;\r
-#endif\r
-\r
-extern unsigned g_uSmoothWindowLength;\r
-extern unsigned g_uAnchorSpacing;\r
-extern unsigned g_uMaxTreeRefineIters;\r
-\r
-extern unsigned g_uMinDiagLength;\r
-extern unsigned g_uMaxDiagBreak;\r
-extern unsigned g_uDiagMargin;\r
-\r
-extern unsigned g_uRefineWindow;\r
-extern unsigned g_uWindowFrom;\r
-extern unsigned g_uWindowTo;\r
-extern unsigned g_uSaveWindow;\r
-extern unsigned g_uWindowOffset;\r
-\r
-extern unsigned g_uMaxSubFamCount;\r
-\r
-extern unsigned g_uHydrophobicRunLength;\r
-extern float g_dHydroFactor;\r
-\r
-extern float g_dSmoothScoreCeil;\r
-extern float g_dMinBestColScore;\r
-extern float g_dMinSmoothScore;\r
-extern float g_dSUEFF;\r
-\r
-extern bool g_bPrecompiledCenter;\r
-extern bool g_bNormalizeCounts;\r
-extern bool g_bDiags1;\r
-extern bool g_bDiags2;\r
-extern bool g_bDiags;\r
-extern bool g_bAnchors;\r
-extern bool g_bCatchExceptions;\r
-\r
-extern bool g_bMSF;\r
-extern bool g_bAln;\r
-extern bool g_bClwStrict;\r
-extern bool g_bHTML;\r
-extern bool g_bPHYI;\r
-extern bool g_bPHYS;\r
-\r
-extern bool g_bQuiet;\r
-extern bool g_bVerbose;\r
-extern bool g_bRefine;\r
-extern bool g_bRefineW;\r
-extern bool g_bRefineX;\r
-extern bool g_bLow;\r
-extern bool g_bSW;\r
-extern bool g_bClusterOnly;\r
-extern bool g_bProfile;\r
-extern bool g_bProfDB;\r
-extern bool g_bPPScore;\r
-extern bool g_bBrenner;\r
-extern bool g_bDimer;\r
-extern bool g_bVersion;\r
-extern bool g_bStable;\r
-extern bool g_bFASTA;\r
-extern bool g_bPAS;\r
-extern bool g_bTomHydro;\r
-extern bool g_bMakeTree;\r
-\r
-extern PPSCORE g_PPScore;\r
-extern OBJSCORE g_ObjScore;\r
-\r
-extern DISTANCE g_Distance1;\r
-extern CLUSTER g_Cluster1;\r
-extern ROOT g_Root1;\r
-extern SEQWEIGHT g_SeqWeight1;\r
-\r
-extern DISTANCE g_Distance2;\r
-extern CLUSTER g_Cluster2;\r
-extern ROOT g_Root2;\r
-extern SEQWEIGHT g_SeqWeight2;\r
-\r
-extern unsigned g_uMaxIters;\r
-extern unsigned long g_ulMaxSecs;\r
-extern unsigned g_uMaxMB;\r
-\r
-extern SEQTYPE g_SeqType;\r
-extern TERMGAPS g_TermGaps;\r
-\r
-#endif // params_h\r