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[jabaws.git] / website / dm_javadoc / allclasses-frame.html
diff --git a/website/dm_javadoc/allclasses-frame.html b/website/dm_javadoc/allclasses-frame.html
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+<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd">\r
+<!--NewPage-->\r
+<HTML>\r
+<HEAD>\r
+<!-- Generated by javadoc (build 1.6.0_21) on Thu Dec 09 12:00:29 GMT 2010 -->\r
+<TITLE>\r
+All Classes\r
+</TITLE>\r
+\r
+<META NAME="date" CONTENT="2010-12-09">\r
+\r
+<LINK REL ="stylesheet" TYPE="text/css" HREF="stylesheet.css" TITLE="Style">\r
+\r
+\r
+</HEAD>\r
+\r
+<BODY BGCOLOR="white">\r
+<FONT size="+1" CLASS="FrameHeadingFont">\r
+<B>All Classes</B></FONT>\r
+<BR>\r
+\r
+<TABLE BORDER="0" WIDTH="100%" SUMMARY="">\r
+<TR>\r
+<TD NOWRAP><FONT CLASS="FrameItemFont"><A HREF="compbio/data/sequence/Alignment.html" title="class in compbio.data.sequence" target="classFrame">Alignment</A>\r
+<BR>\r
+<A HREF="compbio/data/sequence/AlignmentMetadata.html" title="class in compbio.data.sequence" target="classFrame">AlignmentMetadata</A>\r
+<BR>\r
+<A HREF="compbio/data/sequence/AnnotatedSequence.html" title="class in compbio.data.sequence" target="classFrame">AnnotatedSequence</A>\r
+<BR>\r
+<A HREF="compbio/data/msa/Annotation.html" title="interface in compbio.data.msa" target="classFrame"><I>Annotation</I></A>\r
+<BR>\r
+<A HREF="compbio/metadata/Argument.html" title="interface in compbio.metadata" target="classFrame"><I>Argument</I></A>\r
+<BR>\r
+<A HREF="compbio/metadata/ChunkHolder.html" title="class in compbio.metadata" target="classFrame">ChunkHolder</A>\r
+<BR>\r
+<A HREF="compbio/data/sequence/ClustalAlignmentUtil.html" title="class in compbio.data.sequence" target="classFrame">ClustalAlignmentUtil</A>\r
+<BR>\r
+<A HREF="compbio/data/sequence/DisemblResultAnnot.html" title="enum in compbio.data.sequence" target="classFrame">DisemblResultAnnot</A>\r
+<BR>\r
+<A HREF="compbio/data/sequence/FastaSequence.html" title="class in compbio.data.sequence" target="classFrame">FastaSequence</A>\r
+<BR>\r
+<A HREF="compbio/ws/client/IOHelper.html" title="class in compbio.ws.client" target="classFrame">IOHelper</A>\r
+<BR>\r
+<A HREF="compbio/data/msa/JABAService.html" title="interface in compbio.data.msa" target="classFrame"><I>JABAService</I></A>\r
+<BR>\r
+<A HREF="compbio/data/sequence/JalviewAnnotation.html" title="class in compbio.data.sequence" target="classFrame">JalviewAnnotation</A>\r
+<BR>\r
+<A HREF="compbio/data/msa/JManagement.html" title="interface in compbio.data.msa" target="classFrame"><I>JManagement</I></A>\r
+<BR>\r
+<A HREF="compbio/metadata/JobExecutionException.html" title="class in compbio.metadata" target="classFrame">JobExecutionException</A>\r
+<BR>\r
+<A HREF="compbio/metadata/JobStatus.html" title="enum in compbio.metadata" target="classFrame">JobStatus</A>\r
+<BR>\r
+<A HREF="compbio/metadata/JobSubmissionException.html" title="class in compbio.metadata" target="classFrame">JobSubmissionException</A>\r
+<BR>\r
+<A HREF="compbio/ws/client/Jws2Client.html" title="class in compbio.ws.client" target="classFrame">Jws2Client</A>\r
+<BR>\r
+<A HREF="compbio/metadata/Limit.html" title="class in compbio.metadata" target="classFrame">Limit</A>\r
+<BR>\r
+<A HREF="compbio/metadata/LimitExceededException.html" title="class in compbio.metadata" target="classFrame">LimitExceededException</A>\r
+<BR>\r
+<A HREF="compbio/metadata/LimitsManager.html" title="class in compbio.metadata" target="classFrame">LimitsManager</A>\r
+<BR>\r
+<A HREF="compbio/data/msa/Metadata.html" title="interface in compbio.data.msa" target="classFrame"><I>Metadata</I></A>\r
+<BR>\r
+<A HREF="compbio/ws/client/MetadataHelper.html" title="class in compbio.ws.client" target="classFrame">MetadataHelper</A>\r
+<BR>\r
+<A HREF="compbio/data/sequence/Method.html" title="enum in compbio.data.sequence" target="classFrame">Method</A>\r
+<BR>\r
+<A HREF="compbio/data/msa/MsaWS.html" title="interface in compbio.data.msa" target="classFrame"><I>MsaWS</I></A>\r
+<BR>\r
+<A HREF="compbio/data/sequence/MultiAnnotatedSequence.html" title="class in compbio.data.sequence" target="classFrame">MultiAnnotatedSequence</A>\r
+<BR>\r
+<A HREF="compbio/metadata/Option.html" title="class in compbio.metadata" target="classFrame">Option</A>\r
+<BR>\r
+<A HREF="compbio/metadata/Parameter.html" title="class in compbio.metadata" target="classFrame">Parameter</A>\r
+<BR>\r
+<A HREF="compbio/metadata/Preset.html" title="class in compbio.metadata" target="classFrame">Preset</A>\r
+<BR>\r
+<A HREF="compbio/metadata/PresetManager.html" title="class in compbio.metadata" target="classFrame">PresetManager</A>\r
+<BR>\r
+<A HREF="compbio/data/sequence/Program.html" title="enum in compbio.data.sequence" target="classFrame">Program</A>\r
+<BR>\r
+<A HREF="compbio/metadata/ResultNotAvailableException.html" title="class in compbio.metadata" target="classFrame">ResultNotAvailableException</A>\r
+<BR>\r
+<A HREF="compbio/metadata/RunnerConfig.html" title="class in compbio.metadata" target="classFrame">RunnerConfig</A>\r
+<BR>\r
+<A HREF="compbio/data/sequence/Score.html" title="class in compbio.data.sequence" target="classFrame">Score</A>\r
+<BR>\r
+<A HREF="compbio/data/sequence/SequenceUtil.html" title="class in compbio.data.sequence" target="classFrame">SequenceUtil</A>\r
+<BR>\r
+<A HREF="compbio/ws/client/Services.html" title="enum in compbio.ws.client" target="classFrame">Services</A>\r
+<BR>\r
+<A HREF="compbio/data/sequence/UnknownFileFormatException.html" title="class in compbio.data.sequence" target="classFrame">UnknownFileFormatException</A>\r
+<BR>\r
+<A HREF="compbio/metadata/UnsupportedRuntimeException.html" title="class in compbio.metadata" target="classFrame">UnsupportedRuntimeException</A>\r
+<BR>\r
+<A HREF="compbio/metadata/ValueConstrain.html" title="class in compbio.metadata" target="classFrame">ValueConstrain</A>\r
+<BR>\r
+<A HREF="compbio/metadata/ValueConstrain.Type.html" title="enum in compbio.metadata" target="classFrame">ValueConstrain.Type</A>\r
+<BR>\r
+<A HREF="compbio/metadata/WrongParameterException.html" title="class in compbio.metadata" target="classFrame">WrongParameterException</A>\r
+<BR>\r
+<A HREF="compbio/ws/client/WSTester.html" title="class in compbio.ws.client" target="classFrame">WSTester</A>\r
+<BR>\r
+</FONT></TD>\r
+</TR>\r
+</TABLE>\r
+\r
+</BODY>\r
+</HTML>\r