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<HTML>\r
<HEAD>\r
-<!-- Generated by javadoc (build 1.6.0_24) on Fri Aug 12 14:32:36 BST 2011 -->\r
+<!-- Generated by javadoc (build 1.6.0_24) on Wed Dec 07 12:30:43 GMT 2011 -->\r
<TITLE>\r
All Classes\r
</TITLE>\r
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-<META NAME="date" CONTENT="2011-08-12">\r
+<META NAME="date" CONTENT="2011-12-07">\r
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<LINK REL ="stylesheet" TYPE="text/css" HREF="stylesheet.css" TITLE="Style">\r
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<BR>\r
<A HREF="compbio/data/msa/jaxws/CancelJobResponse.html" title="class in compbio.data.msa.jaxws" target="classFrame">CancelJobResponse</A>\r
<BR>\r
+<A HREF="compbio/data/msa/Category.html" title="class in compbio.data.msa" target="classFrame">Category</A>\r
+<BR>\r
<A HREF="compbio/metadata/ChunkHolder.html" title="class in compbio.metadata" target="classFrame">ChunkHolder</A>\r
<BR>\r
<A HREF="compbio/engine/Cleaner.html" title="class in compbio.engine" target="classFrame">Cleaner</A>\r
<BR>\r
<A HREF="compbio/stat/servlet/DisplayStat.html" title="class in compbio.stat.servlet" target="classFrame">DisplayStat</A>\r
<BR>\r
+<A HREF="compbio/stat/servlet/DownloadRedirector.html" title="class in compbio.stat.servlet" target="classFrame">DownloadRedirector</A>\r
+<BR>\r
<A HREF="compbio/runner/_impl/Environment.html" title="class in compbio.runner._impl" target="classFrame">Environment</A>\r
<BR>\r
<A HREF="compbio/engine/client/EnvVariableProcessor.html" title="class in compbio.engine.client" target="classFrame">EnvVariableProcessor</A>\r
<BR>\r
<A HREF="compbio/engine/FilePuller.html" title="class in compbio.engine" target="classFrame">FilePuller</A>\r
<BR>\r
+<A HREF="compbio/ws/server/GAUtils.html" title="class in compbio.ws.server" target="classFrame">GAUtils</A>\r
+<BR>\r
<A HREF="compbio/ws/server/GenericMetadataService.html" title="class in compbio.ws.server" target="classFrame">GenericMetadataService</A>\r
<BR>\r
<A HREF="compbio/data/msa/jaxws/GetAnnotation.html" title="class in compbio.data.msa.jaxws" target="classFrame">GetAnnotation</A>\r
<BR>\r
<A HREF="compbio/data/msa/jaxws/GetRunnerOptionsResponse.html" title="class in compbio.data.msa.jaxws" target="classFrame">GetRunnerOptionsResponse</A>\r
<BR>\r
+<A HREF="compbio/data/msa/jaxws/GetServiceCategories.html" title="class in compbio.data.msa.jaxws" target="classFrame">GetServiceCategories</A>\r
+<BR>\r
+<A HREF="compbio/data/msa/jaxws/GetServiceCategoriesResponse.html" title="class in compbio.data.msa.jaxws" target="classFrame">GetServiceCategoriesResponse</A>\r
+<BR>\r
+<A HREF="compbio/data/msa/jaxws/GetServiceDescription.html" title="class in compbio.data.msa.jaxws" target="classFrame">GetServiceDescription</A>\r
+<BR>\r
+<A HREF="compbio/data/msa/jaxws/GetServiceDescriptionResponse.html" title="class in compbio.data.msa.jaxws" target="classFrame">GetServiceDescriptionResponse</A>\r
+<BR>\r
<A HREF="compbio/data/msa/jaxws/GetSupportedServices.html" title="class in compbio.data.msa.jaxws" target="classFrame">GetSupportedServices</A>\r
<BR>\r
<A HREF="compbio/data/msa/jaxws/GetSupportedServicesResponse.html" title="class in compbio.data.msa.jaxws" target="classFrame">GetSupportedServicesResponse</A>\r
<BR>\r
<A HREF="compbio/pipeline/_jpred/Hit.NumberComporator.html" title="class in compbio.pipeline._jpred" target="classFrame">Hit.NumberComporator</A>\r
<BR>\r
+<A HREF="compbio/stat/servlet/HttpCodeResponseServiceStatus.html" title="class in compbio.stat.servlet" target="classFrame">HttpCodeResponseServiceStatus</A>\r
+<BR>\r
+<A HREF="compbio/stat/collector/InputFilter.html" title="class in compbio.stat.collector" target="classFrame">InputFilter</A>\r
+<BR>\r
<A HREF="compbio/ws/client/IOHelper.html" title="class in compbio.ws.client" target="classFrame">IOHelper</A>\r
<BR>\r
<A HREF="compbio/data/msa/jaxws/IsOperating.html" title="class in compbio.data.msa.jaxws" target="classFrame">IsOperating</A>\r
<BR>\r
<A HREF="compbio/ws/client/Services.html" title="enum in compbio.ws.client" target="classFrame">Services</A>\r
<BR>\r
+<A HREF="compbio/stat/servlet/ServiceStatus.html" title="class in compbio.stat.servlet" target="classFrame">ServiceStatus</A>\r
+<BR>\r
<A HREF="compbio/ws/client/ServicesUtil.html" title="class in compbio.ws.client" target="classFrame">ServicesUtil</A>\r
<BR>\r
+<A HREF="compbio/stat/servlet/ServiceTestResult.html" title="class in compbio.stat.servlet" target="classFrame">ServiceTestResult</A>\r
+<BR>\r
+<A HREF="compbio/ws/server/SetExecutableFlag.html" title="class in compbio.ws.server" target="classFrame">SetExecutableFlag</A>\r
+<BR>\r
<A HREF="compbio/ws/server/ShutdownEngines.html" title="class in compbio.ws.server" target="classFrame">ShutdownEngines</A>\r
<BR>\r
<A HREF="compbio/ws/server/SimpleWSPublisher.html" title="class in compbio.ws.server" target="classFrame">SimpleWSPublisher</A>\r