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<title>Java Bioinformatics Analyses Web Services (JABAWS) Server Configuration manual</title>\r
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+ <td class="bg"><img src="images/jabaws201-2.png" width="263" height="60" alt="JABAWS-2.0.01" title="Java Bioinformatics Analysis Web Services version 2.0.1"/></td>\r
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<div id="content">\r
<h2 id="headtitle">JABAWS MANUAL</h2>\r
\r
-<h2>JABAWS Configuration </h2>\r
+<h2>JABAWS Server Configuration </h2>\r
<ul>\r
<li><a href="#defjabaconf">JABAWS Configuration </a></li>\r
<li><a href="#locEngConf">Local Engine Configuration</a></li>\r
<li><a href="#clustEngConf">Cluster Engine Configuration</a></li>\r
<li><a href="#exec">Executable Configuration</a></li>\r
- <li><a href="#setexecenv">Defining Environment Variables for\r
- Executables</a></li>\r
- <li><a href="#mafftconf">Configure JABAWS to Work\r
-with Mafft</a></li>\r
+ <li><a href="#setexecenv">Defining Environment Variables for Executables</a></li>\r
+ <li><a href="#mafftconf">Configure JABAWS to Work with Mafft</a></li>\r
<li><a href="#settinglimit">Limiting the size of the job accepted by JABAWS Server </a></li>\r
<li><a href="#diffbin">Using a different version of the alignment program with JABAWS</a></li>\r
<li><a href="#mixuse">Load balancing </a></li>\r
<li><a href="#logs">JABAWS requests logging </a></li>\r
<li><a href="#logfiles">JABAWS internal logging </a></li>\r
<li><a href="#warfile">JABAWS War File Content</a></li>\r
- <li><a href="#execstat">JABAWS Usage Statistics</a></li>\r
+ <li><a href="#ga">JABAWS and Google Analytics</a></li>\r
</ul>\r
<h3><a name="defjabaconf" id="defjabaconf"></a>JABAWS Configuration </h3>\r
<p>There are three parts of the system you can configure. The local\r
<td>images referenced by html pages</td>\r
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</table>\r
-</div>\r
-<!-- content end-->\r
-<div id="copyright">Last update: 16 September 2011<br />\r
- Peter Troshin, Jim Procter and Geoff Barton, The Barton Group, University of\r
-Dundee, UK</div>\r
-</div>\r
-\r
-<!-- wrapper end-->\r
-</div>\r
-<!-- page end-->\r
+<h3><a name="ga" id="ga"></a>JABAWS and Google Analytics </h3>\r
+<p>JABAWS reports web services usage to our group Google Analytics (GA) account. JABAWS usage statistics are collected for funding and reporting purposes, and no private information is collected. The data sent by JABAWS is as follows: </p>\r
+<ol>\r
+ <li>The IP address of the JABAWS server machine (the server IP can anonymized see <span class="hightlight">conf/GA.properties</span> config file)</li>\r
+ <li>The name of the web service that was called. </li>\r
+ <li>A few details of the system such as JABAWS version, java version, user language, color depth, screen\r
+ resolution and character encoding.</li>\r
+</ol>\r
+<p> Google Analytics can be disabled or adjusted by removing/editing <span class="hightlight">conf/GA.properties</span> Google Analytics (GA) settings file. We would appreciate it greatly if you could leave it on!</p>\r
+<p>All calls to GA are very lightweight, completed asynchronously, create very little overhead and do not influence the server response time or performance.</p>\r
+</div><!-- content end-->\r
+<div id="copyright">Last update: 28 June 2013<br/>Peter Troshin, Jim Procter and Geoff Barton, The Barton Group, University of Dundee, UK</div>\r
+</div><!-- wrapper end-->\r
+</div><!-- page end-->\r
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