new web site design and updates to the web pages

[jabaws.git] / website / man_serverwar.html

diff --git a/website/man_serverwar.html b/website/man_serverwar.html
index dc994bc..8c6d18f 100644 (file)
--- a/website/man_serverwar.html
+++ b/website/man_serverwar.html
@@ -15,11 +15,12 @@
 <div id="page">\r
 <div id="banner">\r
 <table> \r
-<tr><td style="width:130px;"><a href="http://www.dundee.ac.uk"><img src="images/uod_lt.gif"  alt="University of Dundee" class="logo"  title="University of Dundee" longdesc="http://www.dundee.ac.uk"/></a></td>\r
-<td class="bg"><img src="images/jabaws.png" title="JABAWS:MSA" alt="JABAWS:MSA"/></td>\r
-<td class="bg"><img src="images/align.png"/></td>\r
+<tr><td style="width:158px;"><a href="http://www.dundee.ac.uk"><img src="images/uod_lt_long.gif"  alt="University of Dundee" width="158" height="90" class="logo"  title="University of Dundee" longdesc="http://www.dundee.ac.uk"/></a></td>\r
+<td class="bg"><img src="images/jabaws2.png" alt="JABAWS-2.0:Disorder" width="353" height="67" title="JABAWS-2.0:Disorder"/></td>\r
+<td class="bg"><img src="images/banner_right.png" alt="Disorder" width="200" height="80"/></td>\r
 </tr>\r
-</table></div><!-- banner end-->\r
+</table>\r
+</div><!-- banner end-->\r
 \r
 <div id="wrapper">\r
 <div id="panel"><a href="index.html">Home</a> \r
@@ -32,13 +33,14 @@
                <a href="man_configuration.html" >Server<br/>\r
                Configuration</a>\r
                <a href="man_client.html" title="JABAWS Command Line Client">CMD Client</a>\r
+               <a href="man_stats.html" title="JABAWS Usage Statistics">Usage Statistics</a>\r
                <a href="man_dev.html" title="Accessing JABAWS from your program">Accessing<br/>\r
                JABAWS</a>      \r
        </div>\r
 <a href="download.html">Download</a> \r
 <a href="contacts.html">Contact Us</a>\r
-<a href="http://www.compbio.dundee.ac.uk">Barton Group</a> \r
-</div>\r
+<a href="PublicAnnualStat" title="JABAWS server usage statistics">Usage Statistics</a>\r
+<a href="http://www.compbio.dundee.ac.uk" title="University of Dundee, The Barton Group" >Barton Group</a></div>\r
 \r
 <!-- panel end-->\r
 <div id="content">\r
@@ -196,7 +198,7 @@ modify the paths in <span class=
   <li><a href="http://mafft.cbrc.jp/alignment/software/">Mafft</a></li>\r
   <li><a href="http://www.drive5.com/muscle/download3.6.html">Muscle</a></li>\r
   <li><a href="http://www.tcoffee.org/Packages/Binaries/">Tcoffee</a></li>\r
-  <li>Probcons (Linux <a href="http://www.compbio.dundee.ac.uk/jabaws/archive/binaries/linuxI386/probcons/">I386</a> | <a href="http://www.compbio.dundee.ac.uk/jabaws/archive/binaries/linuxAMD64/probcons/">AMD64</a>)</li>\r
+  <li>Probcons (Linux <a href="http://www.compbio.dundee.ac.uk/jabaws/archive/binaries/linux_x86/probcons">x86</a> | <a href="http://www.compbio.dundee.ac.uk/jabaws/archive/binaries/linux_x64/probcons">x64</a>)</li>\r
 </ul>\r
 <h3><a name="usingWsTester" id="usingWsTester"></a>Testing JABAWS Server </h3>\r
 <p>First of all make sure that Tomcat server is started successfully. If this was the case, then you should see JABAWS home page when you navigate to your Tomcat JABAWS context path e.g. <span class="code">http://myhost.compbio.ac.uk:8080/jabaws</span>If you see it, then it is time to make sure that web services are working too. Assuming that you have unpacked/deployed JABAWS from the server war file, you should be able to navigate to the test program which can be found in &lt;webapplicationpath&gt;/WEB-INF/lib/jabaws-client.jar file. To run the tests type:<span class="code"> java -jar jabaws-client.jar -h=&lt;Your web application server host name, port and JABAWS context path&gt;</span></p>\r