Add updated web site from JWS2 branch

[jabaws.git] / website / tests / Failed suite [Ant suite] / methods-not-run.html

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+<h2>Methods that were not run</h2><table>
+<tr><td>compbio.metadata.OptionCombinatorTester.testgetAllParameters</td></tr>
+<tr><td>compbio.runner.msa.MafftParametersTester.testParameters</td></tr>
+<tr><td>compbio.runner.msa.MuscleParametersTester.testConstrainedParametersMinValues</td></tr>
+<tr><td>compbio.runner.msa.ProbconsParametersTester.testArguments</td></tr>
+<tr><td>compbio.runner.msa.TcoffeeParametersTester.testConstrainedParametersMinValues</td></tr>
+<tr><td>compbio.runner.msa.MafftTester.testExecute</td></tr>
+<tr><td>compbio.engine.conf.PropertyHelperManagerTester.validateClustalConfiguration</td></tr>
+<tr><td>compbio.runner.msa.MafftTester.testRunOnClusterAsyncCheckStatusShortPoolingTime</td></tr>
+<tr><td>compbio.runner.msa.ClustalWParametersTester.testConstrainedParametersMinValues</td></tr>
+<tr><td>compbio.metadata.RunnerConfigTester.testOptionSetInvalidValue</td></tr>
+<tr><td>compbio.metadata.OptionMarshallerTester.testMarshalling</td></tr>
+<tr><td>compbio.engine.FilePullerTester.testGetDelay</td></tr>
+<tr><td>compbio.runner.msa.TcoffeeParametersTester.testParameters</td></tr>
+<tr><td>compbio.runner.msa.ProbconsTester.testConfigurationLoading</td></tr>
+<tr><td>compbio.engine.conf.RunnerConfigMarshallerTester.testValidation</td></tr>
+<tr><td>compbio.runner.msa.MuscleParametersTester.testParameters</td></tr>
+<tr><td>compbio.runner.msa.MafftTester.testPersistance</td></tr>
+<tr><td>compbio.metadata.RunnerConfigTester.testParameterToCommand</td></tr>
+<tr><td>compbio.metadata.RunnerConfigTester.testOptionNoDefaultValidate</td></tr>
+<tr><td>compbio.runner.msa.MafftParametersTester.testConstrainedParametersMinValues</td></tr>
+<tr><td>compbio.runner.msa.MafftTester.testClusterExecute</td></tr>
+<tr><td>compbio.runner.msa.TcoffeeTester.testConfigurationLoading</td></tr>
+<tr><td>compbio.runner.msa.ClustalWParametersTester.testParameters</td></tr>
+<tr><td>compbio.engine.conf.PropertyHelperManagerTester.validateMuscleConfiguration</td></tr>
+<tr><td>compbio.runner.msa.LimitTester.testLoadLimits</td></tr>
+<tr><td>compbio.metadata.PresetTester.marshallPreset</td></tr>
+<tr><td>compbio.runner.msa.TcoffeeTester.readStatistics</td></tr>
+<tr><td>compbio.engine.conf.PropertyHelperManagerTester.validateTcoffeeConfiguration</td></tr>
+<tr><td>compbio.runner.msa.MafftParametersTester.testConstrainedParametersRandomValues</td></tr>
+<tr><td>compbio.metadata.RunnerConfigTester.testValidateValueConstrain</td></tr>
+<tr><td>compbio.runner.msa.MafftTester.testRunOnClusterAsyncCheckStatusLongPoolingTime</td></tr>
+<tr><td>compbio.runner.msa.MafftParametersTester.testOptions</td></tr>
+<tr><td>compbio.runner.msa.ProbconsTester.testSetInputTester</td></tr>
+<tr><td>compbio.engine.conf.RunnerConfigMarshallerTester.testUnMarshalling</td></tr>
+<tr><td>compbio.runner.msa.MuscleParametersTester.testConstrainedParametersRandomValues</td></tr>
+<tr><td>compbio.runner.msa.MuscleTester.testPersistance</td></tr>
+<tr><td>compbio.metadata.RunnerConfigTester.testCreateNumParameterWithoutValidValue</td></tr>
+<tr><td>compbio.runner.msa.TcoffeeParametersTester.testConstrainedParametersRandomValues</td></tr>
+<tr><td>compbio.runner.msa.ClustalWParametersTester.testOptions</td></tr>
+<tr><td>compbio.runner.msa.ProbconsParametersTester.testConstrainedParametersMaxValues</td></tr>
+<tr><td>compbio.runner.msa.TcoffeeParametersTester.testOptions</td></tr>
+<tr><td>compbio.runner.msa.ProbconsParametersTester.testConfiguration</td></tr>
+<tr><td>compbio.runner.msa.ProbconsParametersTester.testDefaultParameters</td></tr>
+<tr><td>compbio.engine.conf.RunnerConfigMarshallerTester.testSchemaFromCodeGeneration</td></tr>
+<tr><td>compbio.runner.msa.ClustalWParametersTester.testConstrainedParametersRandomValues</td></tr>
+<tr><td>compbio.runner.msa.MuscleParametersTester.testOptions</td></tr>
+<tr><td>compbio.metadata.RunnerConfigTester.testOptionToCommand</td></tr>
+<tr><td>compbio.runner.msa.MafftTester.readStatistics</td></tr>
+<tr><td>compbio.runner.msa.MafftParametersTester.testDefaultParameters</td></tr>
+<tr><td>compbio.runner.msa.MafftParametersTester.testConfiguration</td></tr>
+<tr><td>compbio.runner.msa.MafftTester.testSetInputTester</td></tr>
+<tr><td>compbio.metadata.RunnerConfigTester.testCreateParameter</td></tr>
+<tr><td>compbio.engine.conf.RunnerConfigMarshallerTester.testValidationOnMarshalling</td></tr>
+<tr><td>compbio.engine.conf.RunnerConfigMarshallerTester.testMarshalling</td></tr>
+<tr><td>compbio.runner.msa.TcoffeeTester.testNcore</td></tr>
+<tr><td>compbio.metadata.OptionCombinatorTester.testgetAllOptions</td></tr>
+<tr><td>compbio.runner.msa.MafftParametersTester.testConstrainedParametersMaxValues</td></tr>
+<tr><td>compbio.engine.FilePullerTester.testPull</td></tr>
+<tr><td>compbio.runner.msa.MuscleTester.testRunLocally</td></tr>
+<tr><td>compbio.runner.msa.TcoffeeParametersTester.testDefaultParameters</td></tr>
+<tr><td>compbio.runner.msa.TcoffeeParametersTester.testConfiguration</td></tr>
+<tr><td>compbio.runner.msa.ProbconsParametersTester.testOptions</td></tr>
+<tr><td>compbio.runner.msa.ClustalWParametersTester.testConstrainedParametersMaxValues</td></tr>
+<tr><td>compbio.runner.msa.MuscleParametersTester.testDefaultParameters</td></tr>
+<tr><td>compbio.runner.msa.MuscleParametersTester.testConfiguration</td></tr>
+<tr><td>compbio.runner.msa.MuscleParametersTester.testConstrainedParametersMaxValues</td></tr>
+<tr><td>compbio.runner.msa.MuscleTester.testRunOnCluster</td></tr>
+<tr><td>compbio.metadata.RunnerConfigTester.testValidateBoundaryConstrainCheck</td></tr>
+<tr><td>compbio.runner.msa.ClustalWParametersTester.testConfiguration</td></tr>
+<tr><td>compbio.runner.msa.TcoffeeParametersTester.testConstrainedParametersMaxValues</td></tr>
+<tr><td>compbio.runner.msa.ProbconsParametersTester.testConstrainedParametersRandomValues</td></tr>
+<tr><td>compbio.runner.msa.ClustalWParametersTester.testDefaultParameters</td></tr>
+<tr><td>compbio.runner.msa.MuscleTester.testConfigurationLoading</td></tr>
+<tr><td>compbio.engine.conf.PropertyHelperManagerTester.testClusterEngineConf</td></tr>
+<tr><td>compbio.runner.msa.MafftParametersTester.testPresets</td></tr>
+<tr><td>compbio.runner.msa.TcoffeeTester.testExecute</td></tr>
+<tr><td>compbio.metadata.RunnerConfigTester.testValidate</td></tr>
+<tr><td>compbio.metadata.PresetTester.validatePresets</td></tr>
+<tr><td>compbio.engine.FilePullerTester.testCache</td></tr>
+<tr><td>compbio.runner.msa.MuscleTester.readStatistics</td></tr>
+<tr><td>compbio.runner.msa.ClustalWParametersTester.testArguments</td></tr>
+<tr><td>compbio.metadata.OptionMarshallerTester.testUnMarshalling</td></tr>
+<tr><td>compbio.metadata.RunnerConfigTester.testCreateParameterWithValidValueConstrain</td></tr>
+<tr><td>compbio.runner.msa.TcoffeeParametersTester.testArguments</td></tr>
+<tr><td>compbio.engine.conf.PropertyHelperManagerTester.validateMafftConfiguration</td></tr>
+<tr><td>compbio.runner.msa.MuscleParametersTester.testArguments</td></tr>
+<tr><td>compbio.runner.msa.ProbconsParametersTester.testConstrainedParametersMinValues</td></tr>
+<tr><td>compbio.runner.msa.ProbconsTester.testExecute</td></tr>
+<tr><td>compbio.metadata.RunnerConfigTester.testValidateLowerBoundaryConstrainCheck</td></tr>
+<tr><td>compbio.runner.msa.TcoffeeTester.testPersistance</td></tr>
+<tr><td>compbio.engine.conf.PropertyHelperManagerTester.testLocalEngineConf</td></tr>
+<tr><td>compbio.runner.msa.ProbconsTester.testClusterExecute</td></tr>
+<tr><td>compbio.metadata.RunnerConfigTester.testValidateUpperBoundaryConstrainCheck</td></tr>
+<tr><td>compbio.runner.msa.TcoffeeParametersTester.testPresets</td></tr>
+<tr><td>compbio.runner.msa.MuscleTester.testRunOnClusterAsync</td></tr>
+<tr><td>compbio.runner.msa.MuscleParametersTester.testPresets</td></tr>
+<tr><td>compbio.runner.msa.MafftParametersTester.testArguments</td></tr>
+<tr><td>compbio.runner.msa.MafftTester.testConfigurationLoading</td></tr>
+<tr><td>compbio.runner.msa.ProbconsParametersTester.testParameters</td></tr>
+<tr><td>compbio.engine.FilePullerTester.testGet</td></tr>
+<tr><td>compbio.runner.msa.ProbconsTester.testPersistance</td></tr>
+<tr><td>compbio.runner.msa.ClustalWParametersTester.testPresets</td></tr>
+<tr><td>compbio.runner.msa.TcoffeeTester.testClusterExecute</td></tr>
+</table>
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