Add updated web site from JWS2 branch

[jabaws.git] / website / tests / clustengine / compbio.runner.clustal.ClustalWParametersTester.xml

diff --git a/website/tests/clustengine/compbio.runner.clustal.ClustalWParametersTester.xml b/website/tests/clustengine/compbio.runner.clustal.ClustalWParametersTester.xml
new file mode 100644 (file)
index 0000000..9b22c51
--- /dev/null
+++ b/website/tests/clustengine/compbio.runner.clustal.ClustalWParametersTester.xml
@@ -0,0 +1,96 @@
+<?xml version="1.0" encoding="UTF-8"?>\r
+<testsuite name="compbio.runner.clustal.ClustalWParametersTester" failures="8" tests="8" time="2.219" errors="0">\r
+  <properties/>\r
+  <testcase name="testPresets" time="0.344" classname="compbio.runner.clustal.ClustalWParametersTester">\r
+    <failure type="java.lang.IllegalArgumentException" message="Working directory: /homes/pvtroshin/workspace/clustengine/testoutput/local\ClustalW#85979987545393788 is inaccessible or does not exist!">\r
+      <![CDATA[java.lang.IllegalArgumentException: Working directory: /homes/pvtroshin/workspace/clustengine/testoutput/local\ClustalW#85979987545393788 is inaccessible or does not exist!\r
+       at compbio.engine.PathValidator.validateDirectory(PathValidator.java:73)\r
+       at compbio.engine.local.ExecutableWrapper.<init>(ExecutableWrapper.java:57)\r
+       at compbio.engine.local.LocalRunner.executeJob(LocalRunner.java:69)\r
+       at compbio.runner.clustal.ClustalWParametersTester.singleTest(ClustalWParametersTester.java:202)\r
+       at compbio.runner.clustal.ClustalWParametersTester.testPresets(ClustalWParametersTester.java:231)\r
+... Removed 22 stack frames]]>\r
+    </failure>\r
+  </testcase>\r
+  <testcase name="testArguments" time="0.062" classname="compbio.runner.clustal.ClustalWParametersTester">\r
+    <failure type="java.lang.IllegalArgumentException" message="Working directory: /homes/pvtroshin/workspace/clustengine/testoutput/local\ClustalW#42979987799825706 is inaccessible or does not exist!">\r
+      <![CDATA[java.lang.IllegalArgumentException: Working directory: /homes/pvtroshin/workspace/clustengine/testoutput/local\ClustalW#42979987799825706 is inaccessible or does not exist!\r
+       at compbio.engine.PathValidator.validateDirectory(PathValidator.java:73)\r
+       at compbio.engine.local.ExecutableWrapper.<init>(ExecutableWrapper.java:57)\r
+       at compbio.engine.local.LocalRunner.executeJob(LocalRunner.java:69)\r
+       at compbio.runner.clustal.ClustalWParametersTester.singleTest(ClustalWParametersTester.java:202)\r
+       at compbio.runner.clustal.ClustalWParametersTester.test(ClustalWParametersTester.java:183)\r
+       at compbio.runner.clustal.ClustalWParametersTester.testArguments(ClustalWParametersTester.java:137)\r
+... Removed 22 stack frames]]>\r
+    </failure>\r
+  </testcase>\r
+  <testcase name="testParameters" time="0.063" classname="compbio.runner.clustal.ClustalWParametersTester">\r
+    <failure type="java.lang.IllegalArgumentException" message="Working directory: /homes/pvtroshin/workspace/clustengine/testoutput/local\ClustalW#74979987926880363 is inaccessible or does not exist!">\r
+      <![CDATA[java.lang.IllegalArgumentException: Working directory: /homes/pvtroshin/workspace/clustengine/testoutput/local\ClustalW#74979987926880363 is inaccessible or does not exist!\r
+       at compbio.engine.PathValidator.validateDirectory(PathValidator.java:73)\r
+       at compbio.engine.local.ExecutableWrapper.<init>(ExecutableWrapper.java:57)\r
+       at compbio.engine.local.LocalRunner.executeJob(LocalRunner.java:69)\r
+       at compbio.runner.clustal.ClustalWParametersTester.singleTest(ClustalWParametersTester.java:202)\r
+       at compbio.runner.clustal.ClustalWParametersTester.test(ClustalWParametersTester.java:183)\r
+       at compbio.runner.clustal.ClustalWParametersTester.testParameters(ClustalWParametersTester.java:129)\r
+... Removed 22 stack frames]]>\r
+    </failure>\r
+  </testcase>\r
+  <testcase name="testDefaultParameters" time="0.031" classname="compbio.runner.clustal.ClustalWParametersTester">\r
+    <failure type="java.lang.IllegalArgumentException" message="Working directory: /homes/pvtroshin/workspace/clustengine/testoutput/local\ClustalW#38979988048124217 is inaccessible or does not exist!">\r
+      <![CDATA[java.lang.IllegalArgumentException: Working directory: /homes/pvtroshin/workspace/clustengine/testoutput/local\ClustalW#38979988048124217 is inaccessible or does not exist!\r
+       at compbio.engine.PathValidator.validateDirectory(PathValidator.java:73)\r
+       at compbio.engine.local.ExecutableWrapper.<init>(ExecutableWrapper.java:57)\r
+       at compbio.engine.local.LocalRunner.executeJob(LocalRunner.java:69)\r
+       at compbio.runner.clustal.ClustalWParametersTester.testDefaultParameters(ClustalWParametersTester.java:105)\r
+... Removed 22 stack frames]]>\r
+    </failure>\r
+  </testcase>\r
+  <testcase name="testOptions" time="0.047" classname="compbio.runner.clustal.ClustalWParametersTester">\r
+    <failure type="java.lang.IllegalArgumentException" message="Working directory: /homes/pvtroshin/workspace/clustengine/testoutput/local\ClustalW#74979988189879815 is inaccessible or does not exist!">\r
+      <![CDATA[java.lang.IllegalArgumentException: Working directory: /homes/pvtroshin/workspace/clustengine/testoutput/local\ClustalW#74979988189879815 is inaccessible or does not exist!\r
+       at compbio.engine.PathValidator.validateDirectory(PathValidator.java:73)\r
+       at compbio.engine.local.ExecutableWrapper.<init>(ExecutableWrapper.java:57)\r
+       at compbio.engine.local.LocalRunner.executeJob(LocalRunner.java:69)\r
+       at compbio.runner.clustal.ClustalWParametersTester.singleTest(ClustalWParametersTester.java:202)\r
+       at compbio.runner.clustal.ClustalWParametersTester.test(ClustalWParametersTester.java:183)\r
+       at compbio.runner.clustal.ClustalWParametersTester.testOptions(ClustalWParametersTester.java:122)\r
+... Removed 22 stack frames]]>\r
+    </failure>\r
+  </testcase>\r
+  <testcase name="testConstrainedParametersMinValues" time="0.546" classname="compbio.runner.clustal.ClustalWParametersTester">\r
+    <failure type="java.lang.IllegalArgumentException" message="Working directory: /homes/pvtroshin/workspace/clustengine/testoutput/local\ClustalW#70979988327544395 is inaccessible or does not exist!">\r
+      <![CDATA[java.lang.IllegalArgumentException: Working directory: /homes/pvtroshin/workspace/clustengine/testoutput/local\ClustalW#70979988327544395 is inaccessible or does not exist!\r
+       at compbio.engine.PathValidator.validateDirectory(PathValidator.java:73)\r
+       at compbio.engine.local.ExecutableWrapper.<init>(ExecutableWrapper.java:57)\r
+       at compbio.engine.local.LocalRunner.executeJob(LocalRunner.java:69)\r
+       at compbio.runner.clustal.ClustalWParametersTester.singleTest(ClustalWParametersTester.java:202)\r
+       at compbio.runner.clustal.ClustalWParametersTester.test(ClustalWParametersTester.java:174)\r
+       at compbio.runner.clustal.ClustalWParametersTester.testConstrainedParametersMinValues(ClustalWParametersTester.java:144)\r
+... Removed 22 stack frames]]>\r
+    </failure>\r
+  </testcase>\r
+  <testcase name="testConstrainedParametersMaxValues" time="0.031" classname="compbio.runner.clustal.ClustalWParametersTester">\r
+    <failure type="java.lang.IllegalArgumentException" message="Working directory: /homes/pvtroshin/workspace/clustengine/testoutput/local\ClustalW#42979988961908025 is inaccessible or does not exist!">\r
+      <![CDATA[java.lang.IllegalArgumentException: Working directory: /homes/pvtroshin/workspace/clustengine/testoutput/local\ClustalW#42979988961908025 is inaccessible or does not exist!\r
+       at compbio.engine.PathValidator.validateDirectory(PathValidator.java:73)\r
+       at compbio.engine.local.ExecutableWrapper.<init>(ExecutableWrapper.java:57)\r
+       at compbio.engine.local.LocalRunner.executeJob(LocalRunner.java:69)\r
+       at compbio.runner.clustal.ClustalWParametersTester.singleTest(ClustalWParametersTester.java:202)\r
+       at compbio.runner.clustal.ClustalWParametersTester.test(ClustalWParametersTester.java:174)\r
+       at compbio.runner.clustal.ClustalWParametersTester.testConstrainedParametersMaxValues(ClustalWParametersTester.java:151)\r
+... Removed 22 stack frames]]>\r
+    </failure>\r
+  </testcase>\r
+  <testcase name="testConstrainedParametersRandomValues" time="0.031" classname="compbio.runner.clustal.ClustalWParametersTester">\r
+    <failure type="java.lang.IllegalArgumentException" message="Working directory: /homes/pvtroshin/workspace/clustengine/testoutput/local\ClustalW#46979989070571443 is inaccessible or does not exist!">\r
+      <![CDATA[java.lang.IllegalArgumentException: Working directory: /homes/pvtroshin/workspace/clustengine/testoutput/local\ClustalW#46979989070571443 is inaccessible or does not exist!\r
+       at compbio.engine.PathValidator.validateDirectory(PathValidator.java:73)\r
+       at compbio.engine.local.ExecutableWrapper.<init>(ExecutableWrapper.java:57)\r
+       at compbio.engine.local.LocalRunner.executeJob(LocalRunner.java:69)\r
+       at compbio.runner.clustal.ClustalWParametersTester.singleTest(ClustalWParametersTester.java:202)\r
+       at compbio.runner.clustal.ClustalWParametersTester.testConstrainedParametersRandomValues(ClustalWParametersTester.java:164)\r
+... Removed 22 stack frames]]>\r
+    </failure>\r
+  </testcase>\r
+</testsuite>\r