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Merge branch 'develop' into alpha/JAL-3362_Jalview_212_alpha
[jalview.git] / src / jalview / gui /
2020-04-23 Jim ProcterMerge branch 'develop' into alpha/JAL-3362_Jalview_212_... tree | commitdiff
2020-04-21 Jim ProcterJAL-3407 add GPL license to Jalview source files tree | commitdiff
2020-04-16 gmungocJAL-3567 report mapped location for virtual features... tree | commitdiff
2020-04-06 Jim ProcterJAL-3407 redact java 8 incompatible type inference tree | commitdiff
2020-04-06 gmungocJAL-3581 no hidden sequence marker if hidden markers... tree | commitdiff
2020-04-06 gmungocJAL-3579 no Feature Editor if features not shown tree | commitdiff
2020-03-19 gmungocJAL-3305 don't propagate an empty SelectionGroup to... tree | commitdiff
2020-03-09 gmungocJAL-3549 JAL-3305 no Sort By Score / Density if no... tree | commitdiff
2020-03-09 gmungocJAL-3412 update layout whenever desired id width changes testbuild/JAL-3412_getIdWidth_test tree | commitdiff
2020-03-06 gmungocMerge branch 'feature/JAL-3468featureDescriptionEllipsi... tree | commitdiff
2020-03-06 gmungocJAL-3468 i18n and additional unit tests feature/JAL-3468featureDescriptionEllipsis tree | commitdiff
2020-03-03 soaresJAL-3468 Adapted methods to report how many features... tree | commitdiff
2020-03-02 Jim ProcterJAL-3407 redact Java 8 incompatible '<>' with anonymous... tree | commitdiff
2020-02-27 Jim ProcterMerge branch 'bug/JAL-3412idWidthDiscrepancy' into... bug/JAL-3412idWidthDiscrepancy tree | commitdiff
2020-02-21 Jim ProcterJAL-3186 ensure transparency slider position is updated... tree | commitdiff
2020-02-21 Jim ProcterJAL-3186 avoid repainting twice in splitframe tree | commitdiff
2020-02-21 Jim ProcterMerge branch 'develop' into features/JAL-3187_uitweaks tree | commitdiff
2020-02-20 Jim ProcterJAL-3187 nice to have enabling/disabling of apply/cance... features/JAL-3187_uitweaks tree | commitdiff
2020-02-20 Jim ProcterJAL-3187 use the recommended way of catching tab select... tree | commitdiff
2020-02-20 gmungocJAL-3187 repaint complement after loading on features tree | commitdiff
2020-02-20 Jim ProcterJAL-3187 individual feature settings panel has revert... tree | commitdiff
2020-02-19 Jim ProcterJAL-3187 i18n for titles in windows/tabs tree | commitdiff
2020-02-19 Jim ProcterJAL-3535 todo re titles for CDS and Protein views in... tree | commitdiff
2020-02-19 Jim ProcterJAL-3187 - tabbed pane is nulled when feature settings... tree | commitdiff
2020-02-19 Jim ProcterJAL-3187 JAL-2764 close feature settings when parent... tree | commitdiff
2020-02-19 Jim ProcterJAL-3538 anti-aliasing enabled by default tree | commitdiff
2020-02-18 Jim ProcterJAl-3187 JAL-3535 JAL-3534 update open feature settings... tree | commitdiff
2020-02-17 Jim ProcterJAL-3534 patch for simple case (Protein or Nucleotide... tree | commitdiff
2020-02-17 Jim ProcterJAL-3187 fix for JAL-3533 on CDS/Protein tabbed feature... tree | commitdiff
2020-02-17 Jim ProcterJAL-3187 JAL-3533 JAL-3535 set feature settings dialog... tree | commitdiff
2020-02-17 Jim ProcterJAL-3187 better semantics for feature settings closed... tree | commitdiff
2020-02-14 Jim ProcterJAL-3187 alternative solution - gather feature settings... tree | commitdiff
2020-02-12 Jim ProcterJAL-3187 first stab at ‘show CDS/Protein Settings’... tree | commitdiff
2020-02-12 Jim ProcterJAL-3187 view controller UI api method to show feature... tree | commitdiff
2020-02-12 Jim ProcterJAL-3187 convenience method on SplitContainerI to retri... tree | commitdiff
2019-11-01 Ben SoaresJAL-3474 removed all .cvsignore files stored in the... improvement/JAL-3474_lots_of_.cvsignore_files tree | commitdiff
2019-10-31 gmungocJAL-3468 truncate feature description to 40 chars in... tree | commitdiff
2019-10-11 Mateusz WarownyJAL-3066 Create labels for fields and hack it to work... tree | commitdiff
2019-10-03 Jim ProcterJAL-3070 slivka service discovery as a background threa... tree | commitdiff
2019-09-26 Jim ProcterJAL-3070 JAL-3066 JAL-2808 allow feature filter definit... tree | commitdiff
2019-09-26 gmungocJAL-3441 action double-click in Feature Type column... tree | commitdiff
2019-09-23 Jim ProcterJAL-3066 JAL-3070 pull up non-jabaws specific service... tree | commitdiff
2019-09-17 Jim ProcterJAL-3432 hide the slider when validator has no min... tree | commitdiff
2019-09-05 Mateusz WarownyJAL-3066 Implement clustaloWS using slivka system. tree | commitdiff
2019-08-19 gmungocJAL-3412 calculateIdWidth - more consistency, constants... tree | commitdiff
2019-08-13 Jim ProcterMerge branch 'alpha/JAL-3362_Jalview_212_alpha' into... tree | commitdiff
2019-08-07 gmungocMerge branch 'develop' into feature/JAL-3187linkedFeatures tree | commitdiff
2019-07-29 gmungocJAL-3386 correct wrapped width calculation for headless... tree | commitdiff
2019-07-29 gmungocJAL-3377 more reused of SeqCanvas.computeWrappedGeometry tree | commitdiff
2019-07-29 gmungocJAL-3377 add seq-annotations gap to cheight not to... tree | commitdiff
2019-07-29 gmungocJAL-3377 Javadoc added for getWrappedHeight() tree | commitdiff
2019-07-29 gmungocJAL-3377 corrected wrapped widths height for IdCanvas tree | commitdiff
2019-07-29 gmungocJAL-3377 include seq-annotation spacing in getWrappedHe... tree | commitdiff
2019-07-15 Jim ProcterMerge branch 'merge/JAL-3285_mchmmer_with_211_develop... tree | commitdiff
2019-07-12 ThomasJAL-2629 add sort by evalue and bit score tree | commitdiff
2019-07-11 Jim ProcterMerge branch 'merge/JAL-3285_mchmmer_with_211_develop... tree | commitdiff
2019-07-10 gmungocMerge branch 'develop' into feature/JAL-3187linkedFeatures tree | commitdiff
2019-07-10 Jim ProcterMerge branch 'tasks/JAL-3070_wsinterfaces' into alpha... tree | commitdiff
2019-07-10 tvaJAL-2629 fix incorrect hmmbuild on groups behaviour tree | commitdiff
2019-07-10 Jim ProcterMerge branch 'merge/JAL-3285_mchmmer_with_211_develop... tree | commitdiff
2019-07-08 gmungocJAL-3187 derived peptide variants tweaks and tests tree | commitdiff
2019-07-05 gmungocJAL-3187 initial refactoring towards peptide variant... tree | commitdiff
2019-07-03 tvaJAL-2629 can now filter by sequence e-value or bit... tree | commitdiff
2019-07-02 Jim ProcterMerge branch 'develop' into tasks/JAL-3311_removeVamsasMenu tree | commitdiff
2019-07-02 tvaJAL-2629 add simple jackhmmer functionality tree | commitdiff
2019-07-01 Ben SoaresJAL-3333 removed unused variable tree | commitdiff
2019-07-01 Ben SoaresJAL-3333 using floats for smoother weighting tree | commitdiff
2019-06-29 Ben SoaresJAL-3333 Sorry couldn't resist adding a bit of weightin... tree | commitdiff
2019-06-29 Ben SoaresJAL-3333 Title text now appears instantly. Altering... tree | commitdiff
2019-06-28 Ben SoaresMerge branch 'bug/JAL-3333_Blurry_fonts_in_WebServiceIn... tree | commitdiff
2019-06-28 Ben SoaresJAL-3333 changed RGB model. Tested in mojave and Windo... tree | commitdiff
2019-06-28 tvaJAL-2629 add ability to add background frequencies... tree | commitdiff
2019-06-28 Jim ProcterMerge branch 'bug/JAL-3333_Blurry_fonts_in_WebServiceIn... tree | commitdiff
2019-06-28 Ben SoaresJAL-3333 Smooth rotation of image now too tree | commitdiff
2019-06-28 Ben SoaresJAL-3333 added height to rotating image preferred size tree | commitdiff
2019-06-28 Jim ProcterJAL-3330 apply Ensembl feature settings when showing... bug/JAL-3330_backpropagateEnsemblFeatureColours tree | commitdiff
2019-06-28 Ben SoaresJAL-3333 Replaced title text rendered in animated image... tree | commitdiff
2019-06-24 Jim ProcterJAL-3330 merge styles onto originating view after fetch... tree | commitdiff
2019-06-24 Jim ProcterJAL-3330 merge styles onto originating views when show... tree | commitdiff
2019-06-24 Jim ProcterJAL-3330 mergeFeatureStyles - needs test coverage tree | commitdiff
2019-06-18 Jim ProcterMerge branch 'bug/JAL-3286duplicatePdbQuery' into develop tree | commitdiff
2019-06-18 gmungocJAL-3304 option to export linked features in Jalview... tree | commitdiff
2019-06-18 gmungocJAL-3187 i18n show linked features checkboxes tree | commitdiff
2019-06-18 gmungocJAL-3305 mirror popup menu column selections in split... tree | commitdiff
2019-06-17 gmungocJAL-2792 JAL-3187 linked features (if shown) in Feature... tree | commitdiff
2019-06-17 gmungocJAL-3187 add sequence to feature details table (and... tree | commitdiff
2019-06-17 Jim ProcterJAL-3311 remove menus and documentation relating to... tasks/JAL-3311_removeVamsasMenu tree | commitdiff
2019-06-14 Jim ProcterJAL-3111 report build type and commit in stdout from... tree | commitdiff
2019-06-11 gmungocMerge branch 'develop' into feature/JAL-3187linkedFeatures tree | commitdiff
2019-06-11 gmungocJAL-3288 fixes for gain/lose focus tree | commitdiff
2019-06-07 gmungocJAL-3187 change fields to local variables tree | commitdiff
2019-06-07 gmungocMerge branch 'develop' into feature/JAL-3187linkedFeatures tree | commitdiff
2019-06-07 gmungocMerge branch 'bug/JAL-3288splitFrameMenusJava11' into... tree | commitdiff
2019-06-07 gmungocJAL-2738 use GeneLocus extends DBRefEntry to hold chrom... tree | commitdiff
2019-06-06 tvaJAL-3285 build Jalview XML file for current version tree | commitdiff
2019-06-06 gmungocMerge branch 'bug/JAL-3288splitFrameMenusJava11' into... tree | commitdiff
2019-06-06 gmungocJAL-3187 deletions (of Castor code) after merge from... tree | commitdiff
2019-06-06 gmungocMerge branch 'develop' into trialMerge tree | commitdiff
2019-06-05 gmungocJAL-3288 override JInternalFrame.setSelected() to avoid... bug/JAL-3288splitFrameMenusJava11 tree | commitdiff
2019-06-05 tvaJAL-3285 method call change in SeqPanel to match develop tree | commitdiff
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