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Merge branch 'releases/Release_2_11_4_Branch'
[jalview.git]
/
src
/
jalview
/
util
/ MapList.java
2022-03-08
Jim Procter
JAL-3438 spotless for 2.11.2.0
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commitdiff
2022-02-11
Jim Procter
JAL-3949 - refactor logging from jalview.bin.Cache...
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commitdiff
2022-02-11
Ben Soares
JAL-3949 Complete new abstracted logging framework...
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commitdiff
2022-01-26
gmungoc
JAL-3725 helper methods for computing mapped feature...
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2021-10-01
gmungoc
JAL-3725 helper methods for computing mapped feature...
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commitdiff
2021-09-16
gmungoc
JAL-3761 more consistent parameter naming
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commitdiff
2021-09-16
gmungoc
JAL-3761 helper method reinstated to avoid code duplication
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commitdiff
2021-09-16
gmungoc
JAL-3761 locateInFrom/To revised with tests; unused...
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commitdiff
2021-09-16
gmungoc
JAL-3761 debugged and working (but not tidied) locateIn...
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commitdiff
2021-09-16
gmungoc
JAL-3761 locateInFrom2 work in progress commit
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commitdiff
2021-09-15
gmungoc
JAL-3761 failing test, formatting, method renamed
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commitdiff
2021-09-15
gmungoc
JAL-3751 only merge strictly contiguous ranges of mappings
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commitdiff
2020-10-28
gmungoc
JAL-3725 helper methods for computing mapped feature...
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commitdiff
2020-10-22
gmungoc
JAL-3751 only merge strictly contiguous ranges of mappings
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commitdiff
2020-10-22
gmungoc
JAL-3751 only merge strictly contiguous ranges of mappings
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commitdiff
2019-06-11
gmungoc
JAL-3187 CDS has same dataset sequence as transcript
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commitdiff
2018-06-04
gmungoc
JAL-3019 correctly form toRange of 'traversed' MapList
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2018-05-07
gmungoc
Merge branch 'releases/Release_2_10_4_Branch' into...
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2018-04-12
gmungoc
JAL-2223 don't add duplicate mappings to StructureSelec...
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commitdiff
2017-12-01
gmungoc
JAL-2835 spike updated to latest (use specific SO term...
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commitdiff
2017-11-28
gmungoc
JAL-2850 MapList.isToForwardStrand added
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commitdiff
2017-10-05
gmungoc
JAL-2738 update spikes/mungo
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2017-10-05
gmungoc
JAL-2738 method to compound / traverse / convolve two...
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2017-10-03
gmungoc
JAL-2738 copy to spikes/mungo
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commitdiff
2017-08-16
Jim Procter
JAL-2418 source formatting
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commitdiff
2016-10-25
Jim Procter
JAL-2089 patch broken merge to master for Release 2...
releases/Release_2_10_0_Branch
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commitdiff
2016-10-06
Jim Procter
JAL-2089 Merge branch releases/Release_2_10_Branch...
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commitdiff
2016-10-05
Jim Procter
JAL-2189 source formatting
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commitdiff
2016-08-09
Jim Procter
JAL-2154 test for CDS->protein map
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commitdiff
2016-08-04
Jim Procter
JAL-2154 test for CDS->protein map
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commitdiff
2016-06-14
gmungoc
JAL-1686 JAL-2110 equals and/or hashCode method added
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2016-06-09
gmungoc
JAL-2110 work in progress
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2016-04-01
gmungoc
JAL-1705 tweak to MapList.toString for debugging
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2016-03-11
gmungoc
JAL-1705 javadoc added only
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2016-03-01
gmungoc
JAL-1705 align CDS and peptide products to transcripts
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commitdiff
2016-01-28
gmungoc
JAL-1705 merge contiguous ranges when constructing...
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2016-01-21
gmungoc
JAL-1705 isFromForwardStrand added; toString (for debug...
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2015-12-22
gmungoc
JAL-653 AlignedCodonFrame internal refactor, merge...
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2015-11-30
gmungoc
JAL-653 MapList constructor merges any contiguous ranges
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commitdiff
2015-10-16
Jim Procter
JAL-1925 update source version in license
Release_2_9_0b2
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commitdiff
2015-10-08
Jim Procter
JAL-1894 update year/version in copyright
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commitdiff
2015-09-10
Jim Procter
JAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...
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commitdiff
2015-09-10
Jim Procter
JAL-1645 source formatting and organise imports
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2015-06-04
gmungoc
toString method added to aid viewing in the debugger
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2015-03-26
gmungoc
Merge develop to Release_2_8_3_Branch
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commitdiff
2015-03-06
Jim Procter
JAL-1683 replace year/version strings with tokens in...
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2014-12-15
Jim Procter
JAL-1620 version bump and release notes
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2014-06-06
Jim Procter
JAL-1517 fix copyright for 2.8.2
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commitdiff
2014-06-05
Jim Procter
JAL-1517 update copyright to version 2.8.2
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commitdiff
2014-05-22
Jim Procter
JAL-1503 update version in GPL header
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2014-01-29
Jim Procter
JAL-1432 updated copyright notices
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2012-10-22
jprocter
Jalview 2.8 Source Header
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commitdiff
2011-10-10
jprocter
update author list in license for (JAL-826)
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2011-09-27
jprocter
apply version 2.7 copyright
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2010-09-23
jprocter
Jalview 2.6 source licence
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2010-04-30
jprocter
jalview 2.5 release banner
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commitdiff
2009-06-19
jprocter
new coverage comparison - no test case in main method yet
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2009-06-08
jprocter
apply gpl development license
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2008-09-04
jprocter
merge from 2_4_Release branch
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2007-11-30
jprocter
bugfixed MapList (must be propagated to vamsas version...
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2007-07-13
jprocter
bugfix and comments
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2007-05-02
jprocter
fixed getIntervals bug to ensure it returns range from...
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2007-04-25
jprocter
moving word methods to MapList and begin bug-fix for...
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2007-04-17
jprocter
proper copy constructor (not clone)
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2007-04-02
amwaterhouse
addElement
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2007-03-23
jprocter
removed Iterator usage.
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2007-03-19
jprocter
mapping implemented by MapList added to DBRefEntry.
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2007-02-07
amwaterhouse
Formatting
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2007-01-25
jprocter
checks for irreflexive mapping in main tester
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2007-01-24
jprocter
kkv change
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2007-01-24
jprocter
Map arbitrary series of non-overlapping integer interva...
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