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-<a href="duplex_8h.html">Go to the documentation of this file.</a><div class="fragment"><div class="line"><a name="l00001"></a><span class="lineno"> 1</span> <span class="preprocessor">#ifndef __VIENNA_RNA_PACKAGE_DUPLEX_H__</span></div>
-<div class="line"><a name="l00002"></a><span class="lineno"> 2</span> <span class="preprocessor"></span><span class="preprocessor">#define __VIENNA_RNA_PACKAGE_DUPLEX_H__</span></div>
-<div class="line"><a name="l00003"></a><span class="lineno"> 3</span> <span class="preprocessor"></span></div>
-<div class="line"><a name="l00004"></a><span class="lineno"> 4</span> <span class="preprocessor">#include "<a class="code" href="data__structures_8h.html" title="All datastructures and typedefs shared among the Vienna RNA Package can be found here.">data_structures.h</a>"</span></div>
-<div class="line"><a name="l00005"></a><span class="lineno"> 5</span> </div>
-<div class="line"><a name="l00012"></a><span class="lineno"> 12</span> <a class="code" href="structduplexT.html">duplexT</a> duplexfold( <span class="keyword">const</span> <span class="keywordtype">char</span> *s1,</div>
-<div class="line"><a name="l00013"></a><span class="lineno"> 13</span>  <span class="keyword">const</span> <span class="keywordtype">char</span> *s2);</div>
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-<div class="line"><a name="l00015"></a><span class="lineno"> 15</span> <a class="code" href="structduplexT.html">duplexT</a> *duplex_subopt( <span class="keyword">const</span> <span class="keywordtype">char</span> *s1,</div>
-<div class="line"><a name="l00016"></a><span class="lineno"> 16</span>  <span class="keyword">const</span> <span class="keywordtype">char</span> *s2,</div>
-<div class="line"><a name="l00017"></a><span class="lineno"> 17</span>  <span class="keywordtype">int</span> delta,</div>
-<div class="line"><a name="l00018"></a><span class="lineno"> 18</span>  <span class="keywordtype">int</span> w);</div>
-<div class="line"><a name="l00019"></a><span class="lineno"> 19</span> </div>
-<div class="line"><a name="l00020"></a><span class="lineno"> 20</span> <a class="code" href="structduplexT.html">duplexT</a> aliduplexfold(<span class="keyword">const</span> <span class="keywordtype">char</span> *s1[],</div>
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-<div class="line"><a name="l00022"></a><span class="lineno"> 22</span> </div>
-<div class="line"><a name="l00023"></a><span class="lineno"> 23</span> <a class="code" href="structduplexT.html">duplexT</a> *aliduplex_subopt(<span class="keyword">const</span> <span class="keywordtype">char</span> *s1[],</div>
-<div class="line"><a name="l00024"></a><span class="lineno"> 24</span>  <span class="keyword">const</span> <span class="keywordtype">char</span> *s2[],</div>
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-<div class="line"><a name="l00027"></a><span class="lineno"> 27</span> </div>
-<div class="line"><a name="l00028"></a><span class="lineno"> 28</span> <span class="preprocessor">#endif</span></div>
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+<h1>/homes/fmmarquesmadeira/Projects/jabaws/binaries/src/ViennaRNA/H/duplex.h</h1><a href="duplex_8h.html">Go to the documentation of this file.</a><div class="fragment"><pre class="fragment"><a name="l00001"></a>00001 <span class="preprocessor">#ifndef __VIENNA_RNA_PACKAGE_DUPLEX_H__</span>
+<a name="l00002"></a>00002 <span class="preprocessor"></span><span class="preprocessor">#define __VIENNA_RNA_PACKAGE_DUPLEX_H__</span>
+<a name="l00003"></a>00003 <span class="preprocessor"></span>
+<a name="l00004"></a>00004 <span class="preprocessor">#include "<a class="code" href="data__structures_8h.html" title="All datastructures and typedefs shared among the Vienna RNA Package can be found...">data_structures.h</a>"</span>
+<a name="l00005"></a>00005
+<a name="l00012"></a>00012 <a class="code" href="structduplexT.html">duplexT</a> duplexfold( <span class="keyword">const</span> <span class="keywordtype">char</span> *s1,
+<a name="l00013"></a>00013 <span class="keyword">const</span> <span class="keywordtype">char</span> *s2);
+<a name="l00014"></a>00014
+<a name="l00015"></a>00015 <a class="code" href="structduplexT.html">duplexT</a> *duplex_subopt( <span class="keyword">const</span> <span class="keywordtype">char</span> *s1,
+<a name="l00016"></a>00016 <span class="keyword">const</span> <span class="keywordtype">char</span> *s2,
+<a name="l00017"></a>00017 <span class="keywordtype">int</span> delta,
+<a name="l00018"></a>00018 <span class="keywordtype">int</span> w);
+<a name="l00019"></a>00019
+<a name="l00020"></a>00020 <a class="code" href="structduplexT.html">duplexT</a> aliduplexfold(<span class="keyword">const</span> <span class="keywordtype">char</span> *s1[],
+<a name="l00021"></a>00021 <span class="keyword">const</span> <span class="keywordtype">char</span> *s2[]);
+<a name="l00022"></a>00022
+<a name="l00023"></a>00023 <a class="code" href="structduplexT.html">duplexT</a> *aliduplex_subopt(<span class="keyword">const</span> <span class="keywordtype">char</span> *s1[],
+<a name="l00024"></a>00024 <span class="keyword">const</span> <span class="keywordtype">char</span> *s2[],
+<a name="l00025"></a>00025 <span class="keywordtype">int</span> delta,
+<a name="l00026"></a>00026 <span class="keywordtype">int</span> w);
+<a name="l00027"></a>00027
+<a name="l00028"></a>00028 <span class="preprocessor">#endif</span>
+</pre></div></div>
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