JWS-117 Compiled all tools with ./compilebin.sh and some were missing related files.
[jabaws.git] / binaries / src / ViennaRNA / doc / html / graph_legend.html
index dbce138..4ea9227 100644 (file)
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 <meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
-<meta http-equiv="X-UA-Compatible" content="IE=9"/>
 <title>RNAlib-2.1.2: Graph Legend</title>
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- <tr style="height: 56px;">
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-   <div id="projectname">RNAlib-2.1.2
-   </div>
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+  <div class="tabs">
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+      <li><a href="main.html"><span>Main&nbsp;Page</span></a></li>
+      <li><a href="pages.html"><span>Related&nbsp;Pages</span></a></li>
       <li><a href="modules.html"><span>Modules</span></a></li>
-      <li><a href="annotated.html"><span>Data&#160;Structures</span></a></li>
+      <li><a href="annotated.html"><span>Data&nbsp;Structures</span></a></li>
       <li><a href="files.html"><span>Files</span></a></li>
     </ul>
   </div>
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-<div id="side-nav" class="ui-resizable side-nav-resizable">
-  <div id="nav-tree">
-    <div id="nav-tree-contents">
-    </div>
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-  <div id="splitbar" style="-moz-user-select:none;" 
-       class="ui-resizable-handle">
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-$(document).ready(function(){initNavTree('graph_legend.html','');});
-</script>
-<div id="doc-content">
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-  <div class="headertitle">
-<div class="title">Graph Legend</div>  </div>
-</div><!--header-->
 <div class="contents">
-<p>This page explains how to interpret the graphs that are generated by doxygen.</p>
+<h1>Graph Legend</h1><p>This page explains how to interpret the graphs that are generated by doxygen.</p>
 <p>Consider the following example: </p>
-<div class="fragment"><div class="line"><span class="comment">/*! Invisible class because of truncation */</span></div>
-<div class="line"><span class="keyword">class </span>Invisible { };</div>
-<div class="line"><span class="comment"></span></div>
-<div class="line"><span class="comment">/*! Truncated class, inheritance relation is hidden */</span></div>
-<div class="line"><span class="keyword">class </span>Truncated : <span class="keyword">public</span> Invisible { };</div>
-<div class="line"></div>
-<div class="line"><span class="comment">/* Class not documented with doxygen comments */</span></div>
-<div class="line"><span class="keyword">class </span>Undocumented { };</div>
-<div class="line"><span class="comment"></span></div>
-<div class="line"><span class="comment">/*! Class that is inherited using public inheritance */</span></div>
-<div class="line"><span class="keyword">class </span>PublicBase : <span class="keyword">public</span> Truncated { };</div>
-<div class="line"><span class="comment"></span></div>
-<div class="line"><span class="comment">/*! A template class */</span></div>
-<div class="line"><span class="keyword">template</span>&lt;<span class="keyword">class</span> T&gt; <span class="keyword">class </span>Templ { };</div>
-<div class="line"><span class="comment"></span></div>
-<div class="line"><span class="comment">/*! Class that is inherited using protected inheritance */</span></div>
-<div class="line"><span class="keyword">class </span>ProtectedBase { };</div>
-<div class="line"><span class="comment"></span></div>
-<div class="line"><span class="comment">/*! Class that is inherited using private inheritance */</span></div>
-<div class="line"><span class="keyword">class </span>PrivateBase { };</div>
-<div class="line"><span class="comment"></span></div>
-<div class="line"><span class="comment">/*! Class that is used by the Inherited class */</span></div>
-<div class="line"><span class="keyword">class </span>Used { };</div>
-<div class="line"><span class="comment"></span></div>
-<div class="line"><span class="comment">/*! Super class that inherits a number of other classes */</span></div>
-<div class="line"><span class="keyword">class </span>Inherited : <span class="keyword">public</span> PublicBase,</div>
-<div class="line">                  <span class="keyword">protected</span> ProtectedBase,</div>
-<div class="line">                  <span class="keyword">private</span> PrivateBase,</div>
-<div class="line">                  <span class="keyword">public</span> Undocumented,</div>
-<div class="line">                  <span class="keyword">public</span> Templ&lt;int&gt;</div>
-<div class="line">{</div>
-<div class="line">  <span class="keyword">private</span>:</div>
-<div class="line">    Used *m_usedClass;</div>
-<div class="line">};</div>
-</div><!-- fragment --><p> This will result in the following graph:</p>
-<center><div class="image">
-<img src="graph_legend.png" />
+<div class="fragment"><pre class="fragment"><span class="comment">/*! Invisible class because of truncation */</span>
+<span class="keyword">class </span>Invisible { };
+<span class="comment"></span>
+<span class="comment">/*! Truncated class, inheritance relation is hidden */</span>
+<span class="keyword">class </span>Truncated : <span class="keyword">public</span> Invisible { };
+
+<span class="comment">/* Class not documented with doxygen comments */</span>
+<span class="keyword">class </span>Undocumented { };
+<span class="comment"></span>
+<span class="comment">/*! Class that is inherited using public inheritance */</span>
+<span class="keyword">class </span>PublicBase : <span class="keyword">public</span> Truncated { };
+<span class="comment"></span>
+<span class="comment">/*! A template class */</span>
+<span class="keyword">template</span>&lt;<span class="keyword">class</span> T&gt; <span class="keyword">class </span>Templ { };
+<span class="comment"></span>
+<span class="comment">/*! Class that is inherited using protected inheritance */</span>
+<span class="keyword">class </span>ProtectedBase { };
+<span class="comment"></span>
+<span class="comment">/*! Class that is inherited using private inheritance */</span>
+<span class="keyword">class </span>PrivateBase { };
+<span class="comment"></span>
+<span class="comment">/*! Class that is used by the Inherited class */</span>
+<span class="keyword">class </span>Used { };
+<span class="comment"></span>
+<span class="comment">/*! Super class that inherits a number of other classes */</span>
+<span class="keyword">class </span>Inherited : <span class="keyword">public</span> PublicBase,
+                  <span class="keyword">protected</span> ProtectedBase,
+                  <span class="keyword">private</span> PrivateBase,
+                  <span class="keyword">public</span> Undocumented,
+                  <span class="keyword">public</span> Templ&lt;int&gt;
+{
+  <span class="keyword">private</span>:
+    Used *m_usedClass;
+};
+</pre></div><p> This will result in the following graph:</p>
+<center><div align="center">
+<img src="graph_legend.png" alt="graph_legend.png"/>
 </div>
-</center><p>The boxes in the above graph have the following meaning: </p>
+</center> <p>The boxes in the above graph have the following meaning:  </p>
 <ul>
 <li>
 A filled gray box represents the struct or class for which the graph is generated. </li>
@@ -110,7 +112,7 @@ A box with a grey border denotes an undocumented struct or class. </li>
 <li>
 A box with a red border denotes a documented struct or class forwhich not all inheritance/containment relations are shown. A graph is truncated if it does not fit within the specified boundaries. </li>
 </ul>
-<p>The arrows have the following meaning: </p>
+<p>The arrows have the following meaning:  </p>
 <ul>
 <li>
 A dark blue arrow is used to visualize a public inheritance relation between two classes. </li>
@@ -123,15 +125,9 @@ A purple dashed arrow is used if a class is contained or used by another class.
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 A yellow dashed arrow denotes a relation between a template instance and the template class it was instantiated from. The arrow is labeled with the template parameters of the instance. </li>
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-<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
-  <ul>
-    <li class="footer">Generated on Wed Jul 24 2013 13:39:00 for RNAlib-2.1.2 by
-    <a href="http://www.doxygen.org/index.html">
-    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.1.1 </li>
-  </ul>
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+<hr size="1"/><address style="text-align: right;"><small>Generated on 11 Apr 2017 for RNAlib-2.1.2 by&nbsp;
+<a href="http://www.doxygen.org/index.html">
+<img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.6.1 </small></address>
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