--- /dev/null
+\hypertarget{svm__utils_8h}{\section{svm\-\_\-utils.\-h}
+\label{svm__utils_8h}\index{/home/asherstnev/\-Projects/\-Java.\-projects/jabaws/secure-\/git/develop/binaries/src/\-Vienna\-R\-N\-A/\-H/svm\-\_\-utils.\-h@{/home/asherstnev/\-Projects/\-Java.\-projects/jabaws/secure-\/git/develop/binaries/src/\-Vienna\-R\-N\-A/\-H/svm\-\_\-utils.\-h}}
+}
+
+\begin{DoxyCode}
+00001 \textcolor{preprocessor}{#ifndef \_\_VIENNA\_RNA\_PACKAGE\_SUBOPT\_H\_\_}
+00002 \textcolor{preprocessor}{}\textcolor{preprocessor}{#define \_\_VIENNA\_RNA\_PACKAGE\_SUBOPT\_H\_\_}
+00003 \textcolor{preprocessor}{}
+\hypertarget{svm__utils_8h_source_l00004}{}\hyperlink{structsvm__model}{00004} \textcolor{keyword}{typedef} \textcolor{keyword}{struct }\hyperlink{structsvm__model}{svm\_model}\{
+00005 \textcolor{keyword}{struct }svm\_parameter param;
+00006 \textcolor{keywordtype}{int} nr\_class;
+00007 \textcolor{keywordtype}{int} l;
+00008 \textcolor{keyword}{struct }svm\_node **SV;
+00009 \textcolor{keywordtype}{double} **sv\_coef;
+00010 \textcolor{keywordtype}{double} *rho;
+00011 \textcolor{keywordtype}{double} *probA;
+00012 \textcolor{keywordtype}{double} *probB;
+00013 \textcolor{keywordtype}{int} *label;
+00014 \textcolor{keywordtype}{int} *nSV;
+00015 \textcolor{keywordtype}{int} free\_sv;
+00016 \} \hyperlink{structsvm__model}{svm\_model};
+00017
+00018 \textcolor{keyword}{extern} \textcolor{keywordtype}{char} *avg\_model\_string;
+00019 \textcolor{keyword}{extern} \textcolor{keywordtype}{char} *sd\_model\_string;
+00020
+00021 \textcolor{keywordtype}{float} get\_z(\textcolor{keywordtype}{char} *sequence,
+00022 \textcolor{keywordtype}{double} energy);
+00023 \textcolor{keywordtype}{double} avg\_regression (\textcolor{keywordtype}{int} N,
+00024 \textcolor{keywordtype}{int} A,
+00025 \textcolor{keywordtype}{int} C,
+00026 \textcolor{keywordtype}{int} G,
+00027 \textcolor{keywordtype}{int} T,
+00028 \textcolor{keyword}{struct} \hyperlink{structsvm__model}{svm\_model} *avg\_model,
+00029 \textcolor{keywordtype}{int} *info );
+00030 \textcolor{keywordtype}{double} sd\_regression (\textcolor{keywordtype}{int} N,
+00031 \textcolor{keywordtype}{int} A,
+00032 \textcolor{keywordtype}{int} C,
+00033 \textcolor{keywordtype}{int} G,
+00034 \textcolor{keywordtype}{int} T,
+00035 \textcolor{keyword}{struct} \hyperlink{structsvm__model}{svm\_model} *sd\_model);
+00036 \textcolor{keywordtype}{double} minimal\_sd (\textcolor{keywordtype}{int} N,
+00037 \textcolor{keywordtype}{int} A,
+00038 \textcolor{keywordtype}{int} C,
+00039 \textcolor{keywordtype}{int} G,
+00040 \textcolor{keywordtype}{int} T);
+00041 \hyperlink{structsvm__model}{svm\_model} *svm\_load\_model\_string(\textcolor{keywordtype}{char} *modelString);
+00042 \textcolor{keywordtype}{int} *get\_seq\_composition( \textcolor{keywordtype}{short} *S,
+00043 \textcolor{keywordtype}{unsigned} \textcolor{keywordtype}{int} start,
+00044 \textcolor{keywordtype}{unsigned} \textcolor{keywordtype}{int} stop);
+00045
+00046 \textcolor{preprocessor}{#endif}
+\end{DoxyCode}