* must include this copyright and license notice.\r
*/\r
package compbio.engine.cluster.dundee;\r
-import static compbio.engine.cluster.dundee._QueueConstraints.*;\r
+import static compbio.engine.cluster.dundee._QueueConstraints.FIRST_MEMORY_LIMIT;\r
+import static compbio.engine.cluster.dundee._QueueConstraints.LONG_TIME_LIMIT;\r
+import static compbio.engine.cluster.dundee._QueueConstraints.MAX_MEMORY_LIMIT;\r
+import static compbio.engine.cluster.dundee._QueueConstraints.SHORT_TIME_LIMIT;\r
\r
+@Deprecated\r
public enum _Queue {\r
\r
/*\r
- * devel.q 4Gb or 16Gb 8 hour I\r
- 64bit-pri.q 4Gb or 16Gb 24 hours B\r
- 64bit.q 4Gb or 16Gb None B\r
- bigint.q 32Gb 8 h I\r
- bigmem.q 32Gb None B \r
+ * devel.q 4Gb or 16Gb 8 hour I 64bit-pri.q 4Gb or 16Gb 24 hours B 64bit.q\r
+ * 4Gb or 16Gb None B bigint.q 32Gb 8 h I bigmem.q 32Gb None B\r
*/\r
\r
/**\r
* Order of the constraint reflect the priority of the queue\r
*/\r
- DEVEL(FIRST_MEMORY_LIMIT, SHORT_TIME_LIMIT,"devel.q"), \r
- PRIBIT64(FIRST_MEMORY_LIMIT,LONG_TIME_LIMIT,"64bit-pri.q"), \r
- BIT64(FIRST_MEMORY_LIMIT,0,"64bit.q"), \r
- BIGINT(MAX_MEMORY_LIMIT,SHORT_TIME_LIMIT,"bigint.q"), \r
- BIGMEM(MAX_MEMORY_LIMIT,0,"bigmem.q");\r
- \r
- \r
+ DEVEL(FIRST_MEMORY_LIMIT, SHORT_TIME_LIMIT, "devel.q"), PRIBIT64(\r
+ FIRST_MEMORY_LIMIT, LONG_TIME_LIMIT, "64bit-pri.q"), BIT64(\r
+ FIRST_MEMORY_LIMIT, 0, "64bit.q"), BIGINT(MAX_MEMORY_LIMIT,\r
+ SHORT_TIME_LIMIT, "bigint.q"), BIGMEM(MAX_MEMORY_LIMIT, 0,\r
+ "bigmem.q");\r
+\r
int maxMemory;\r
int maxRuntime;\r
String qname;\r
private _Queue(int maxMemory, int maxRuntime, String qname) {\r
- this.maxMemory=maxMemory;\r
- this.maxRuntime=maxRuntime;\r
- this.qname = qname; \r
+ this.maxMemory = maxMemory;\r
+ this.maxRuntime = maxRuntime;\r
+ this.qname = qname;\r
}\r
- \r
+\r
// -q 64bit.q -l qname=64bit.q -l h_vmem=8000M -l ram=8000M\r
@Override\r
public String toString() {\r
\r
/**\r
* 0 - unlimited\r
+ * \r
* @return max runtime in hours\r
*/\r
- public int getTimeLimit() { \r
+ public int getTimeLimit() {\r
return this.maxRuntime;\r
}\r
- \r
+\r
/**\r
* \r
- * @return true if the queue has time limit, false overwise \r
+ * @return true if the queue has time limit, false overwise\r
*/\r
- public boolean hasTimeLimit() { \r
- return this.maxRuntime != 0; \r
+ public boolean hasTimeLimit() {\r
+ return this.maxRuntime != 0;\r
}\r
/**\r
* return max memory limit in Mb\r
+ * \r
* @return\r
*/\r
- public int getMemoryLimit() { \r
+ public int getMemoryLimit() {\r
return this.maxMemory;\r
}\r
- \r
- public static _Queue getQueueByMemoryRequirements(int maxMemory) { \r
- if(maxMemory>FIRST_MEMORY_LIMIT) {\r
+\r
+ public static _Queue getQueueByMemoryRequirements(int maxMemory) {\r
+ if (maxMemory > FIRST_MEMORY_LIMIT) {\r
return BIGMEM;\r
- } else if(maxMemory<MAX_MEMORY_LIMIT)\r
- return BIT64; \r
- else { \r
- throw new UnsupportedOperationException("Cluster does not support tasks requiring more than 30000M of memory");\r
+ } else if (maxMemory < MAX_MEMORY_LIMIT)\r
+ return BIT64;\r
+ else {\r
+ throw new UnsupportedOperationException(\r
+ "Cluster does not support tasks requiring more than 30000M of memory");\r
}\r
}\r
\r
- public static _Queue getQueue(int maxMemory, int timeLimitInHours) { \r
- if(timeLimitInHours==0) { \r
+ public static _Queue getQueue(int maxMemory, int timeLimitInHours) {\r
+ if (timeLimitInHours == 0) {\r
return getQueueByMemoryRequirements(maxMemory);\r
- } else { \r
- if(timeLimitInHours<=SHORT_TIME_LIMIT) { \r
- if(maxMemory<=FIRST_MEMORY_LIMIT) { \r
+ } else {\r
+ if (timeLimitInHours <= SHORT_TIME_LIMIT) {\r
+ if (maxMemory <= FIRST_MEMORY_LIMIT) {\r
return DEVEL;\r
- }else if(maxMemory<=MAX_MEMORY_LIMIT){ \r
+ } else if (maxMemory <= MAX_MEMORY_LIMIT) {\r
return BIGINT;\r
- } else { \r
- throw new UnsupportedOperationException("Cluster does not support tasks requiring more than 30000M of memory");\r
+ } else {\r
+ throw new UnsupportedOperationException(\r
+ "Cluster does not support tasks requiring more than 30000M of memory");\r
}\r
- } else { \r
+ } else {\r
// timeLimit > 8\r
- if(timeLimitInHours <= LONG_TIME_LIMIT && maxMemory <=FIRST_MEMORY_LIMIT) { \r
- return PRIBIT64; \r
- } else if( maxMemory<= MAX_MEMORY_LIMIT){ \r
+ if (timeLimitInHours <= LONG_TIME_LIMIT\r
+ && maxMemory <= FIRST_MEMORY_LIMIT) {\r
+ return PRIBIT64;\r
+ } else if (maxMemory <= MAX_MEMORY_LIMIT) {\r
return BIGMEM;\r
- } else { \r
- throw new UnsupportedOperationException("Cluster does not support tasks requiring more than 30000M of memory");\r
+ } else {\r
+ throw new UnsupportedOperationException(\r
+ "Cluster does not support tasks requiring more than 30000M of memory");\r
}\r
}\r
}\r
}\r
- \r
- public _Queue getQueue(String queueName) { \r
- switch(this) { \r
- case DEVEL: \r
- if ( queueName.equals(DEVEL.toString())) { \r
- return DEVEL;\r
- }\r
- break;\r
- case PRIBIT64: \r
- if ( queueName.equals(PRIBIT64.toString())) { \r
- return PRIBIT64;\r
- }\r
- break;\r
- case BIT64: \r
- if ( queueName.equals(BIT64.toString())) { \r
- return BIT64;\r
- }\r
- break;\r
- case BIGMEM: \r
- if ( queueName.equals(BIGMEM.toString())) { \r
- return BIGMEM;\r
- }\r
- break;\r
- case BIGINT: \r
- if ( queueName.equals(BIGINT.toString())) { \r
- return BIGINT;\r
- }\r
- break; \r
+\r
+ public _Queue getQueue(String queueName) {\r
+ switch (this) {\r
+ case DEVEL :\r
+ if (queueName.equals(DEVEL.toString())) {\r
+ return DEVEL;\r
+ }\r
+ break;\r
+ case PRIBIT64 :\r
+ if (queueName.equals(PRIBIT64.toString())) {\r
+ return PRIBIT64;\r
+ }\r
+ break;\r
+ case BIT64 :\r
+ if (queueName.equals(BIT64.toString())) {\r
+ return BIT64;\r
+ }\r
+ break;\r
+ case BIGMEM :\r
+ if (queueName.equals(BIGMEM.toString())) {\r
+ return BIGMEM;\r
+ }\r
+ break;\r
+ case BIGINT :\r
+ if (queueName.equals(BIGINT.toString())) {\r
+ return BIGINT;\r
+ }\r
+ break;\r
}\r
// such queue appears to be not defined in the system!\r
- return null; \r
+ return null;\r
}\r
\r
}\r