git://source.jalview.org / jabaws.git / blobdiff
? search:
summary | shortlog | log | commit | commitdiff | tree
raw | inline | side by side
updated javadoc for the system as well as new redirect address for download app
[jabaws.git] / website / dm_javadoc / compbio / data / sequence / package-frame.html
diff --git a/website/dm_javadoc/compbio/data/sequence/package-frame.html b/website/dm_javadoc/compbio/data/sequence/package-frame.html
new file mode 100644 (file)
index 0000000..2fec9c5
--- /dev/null
+++ b/website/dm_javadoc/compbio/data/sequence/package-frame.html
@@ -0,0 +1,78 @@
+<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd">\r
+<!--NewPage-->\r
+<HTML>\r
+<HEAD>\r
+<!-- Generated by javadoc (build 1.6.0_24) on Wed Dec 07 12:08:24 GMT 2011 -->\r
+<TITLE>\r
+compbio.data.sequence\r
+</TITLE>\r
+\r
+<META NAME="date" CONTENT="2011-12-07">\r
+\r
+<LINK REL ="stylesheet" TYPE="text/css" HREF="../../../stylesheet.css" TITLE="Style">\r
+\r
+\r
+</HEAD>\r
+\r
+<BODY BGCOLOR="white">\r
+<FONT size="+1" CLASS="FrameTitleFont">\r
+<A HREF="../../../compbio/data/sequence/package-summary.html" target="classFrame">compbio.data.sequence</A></FONT>\r
+<TABLE BORDER="0" WIDTH="100%" SUMMARY="">\r
+<TR>\r
+<TD NOWRAP><FONT size="+1" CLASS="FrameHeadingFont">\r
+Classes</FONT>&nbsp;\r
+<FONT CLASS="FrameItemFont">\r
+<BR>\r
+<A HREF="Alignment.html" title="class in compbio.data.sequence" target="classFrame">Alignment</A>\r
+<BR>\r
+<A HREF="AlignmentMetadata.html" title="class in compbio.data.sequence" target="classFrame">AlignmentMetadata</A>\r
+<BR>\r
+<A HREF="ClustalAlignmentUtil.html" title="class in compbio.data.sequence" target="classFrame">ClustalAlignmentUtil</A>\r
+<BR>\r
+<A HREF="FastaReader.html" title="class in compbio.data.sequence" target="classFrame">FastaReader</A>\r
+<BR>\r
+<A HREF="FastaSequence.html" title="class in compbio.data.sequence" target="classFrame">FastaSequence</A>\r
+<BR>\r
+<A HREF="Range.html" title="class in compbio.data.sequence" target="classFrame">Range</A>\r
+<BR>\r
+<A HREF="Score.html" title="class in compbio.data.sequence" target="classFrame">Score</A>\r
+<BR>\r
+<A HREF="ScoreManager.html" title="class in compbio.data.sequence" target="classFrame">ScoreManager</A>\r
+<BR>\r
+<A HREF="ScoreManager.ScoreHolder.html" title="class in compbio.data.sequence" target="classFrame">ScoreManager.ScoreHolder</A>\r
+<BR>\r
+<A HREF="SequenceUtil.html" title="class in compbio.data.sequence" target="classFrame">SequenceUtil</A></FONT></TD>\r
+</TR>\r
+</TABLE>\r
+\r
+\r
+<TABLE BORDER="0" WIDTH="100%" SUMMARY="">\r
+<TR>\r
+<TD NOWRAP><FONT size="+1" CLASS="FrameHeadingFont">\r
+Enums</FONT>&nbsp;\r
+<FONT CLASS="FrameItemFont">\r
+<BR>\r
+<A HREF="ConservationMethod.html" title="enum in compbio.data.sequence" target="classFrame">ConservationMethod</A>\r
+<BR>\r
+<A HREF="DisorderMethod.html" title="enum in compbio.data.sequence" target="classFrame">DisorderMethod</A>\r
+<BR>\r
+<A HREF="Program.html" title="enum in compbio.data.sequence" target="classFrame">Program</A>\r
+<BR>\r
+<A HREF="SMERFSConstraints.html" title="enum in compbio.data.sequence" target="classFrame">SMERFSConstraints</A></FONT></TD>\r
+</TR>\r
+</TABLE>\r
+\r
+\r
+<TABLE BORDER="0" WIDTH="100%" SUMMARY="">\r
+<TR>\r
+<TD NOWRAP><FONT size="+1" CLASS="FrameHeadingFont">\r
+Exceptions</FONT>&nbsp;\r
+<FONT CLASS="FrameItemFont">\r
+<BR>\r
+<A HREF="UnknownFileFormatException.html" title="class in compbio.data.sequence" target="classFrame">UnknownFileFormatException</A></FONT></TD>\r
+</TR>\r
+</TABLE>\r
+\r
+\r
+</BODY>\r
+</HTML>\r