The code structure
------------------
-.. image:: ../website/static/img/ws-structure.png
+.. image:: ../../website/static/img/ws-structure.png
:height: 414
:width: 282
:scale: 95 %
-.. |folder| image:: ../website/static/img/folder-small.png
+.. |folder| image:: ../../website/static/img/folder-small.png
:align: middle
:width: 15
.. links
.. _Git-tracker: https://source.jalview.org/crucible/changelog/jabaws
-.. _Data Model JavaDoc: http://www.compbio.dundee.ac.uk/jabaws/dm_javadoc/index.html
-.. _Complete JavaDoc: http://www.compbio.dundee.ac.uk/jabaws/full_javadoc/index.html
+.. _Data Model JavaDoc: ../dm_javadoc/index.html
+.. _Complete JavaDoc: ../full_javadoc/index.html
.. _JavaDoc: http://www.compbio.dundee.ac.uk/jabaws/full_javadoc/index.html
.. _Test Results: http://www.compbio.dundee.ac.uk/user/www-jws2/tests/index.html
.. _TestNG: http://testng.org/doc/index.html