</path>\r
\r
<property name="wsdl.dir" location="${basedir}/webservices/compbio/ws/server/resource" />\r
+ <property name="jpred.wsdl" location="${wsdl.dir}/JpredWS.wsdl" />\r
+ <property name="aacon.wsdl" location="${wsdl.dir}/AAConWS.wsdl" />\r
<property name="clustal.wsdl" location="${wsdl.dir}/ClustalWS.wsdl" />\r
<property name="muscle.wsdl" location="${wsdl.dir}/MuscleWS.wsdl" />\r
<property name="tcoffee.wsdl" location="${wsdl.dir}/TcoffeeWS.wsdl" />\r
<property name="mafft.wsdl" location="${wsdl.dir}/MafftWS.wsdl" />\r
- <property name="aacon.wsdl" location="${wsdl.dir}/AAConWS.wsdl" />\r
+ <property name="glprobs.wsdl" location="${wsdl.dir}/GLprobsWS.wsdl" />\r
+ <property name="msaprobs.wsdl" location="${wsdl.dir}/MSAprobsWS.wsdl" />\r
+\r
<property name="disembl.wsdl" location="${wsdl.dir}/DisemblWS.wsdl" />\r
<property name="globplot.wsdl" location="${wsdl.dir}/GlobPlotWS.wsdl" />\r
+ <property name="iupred.wsdl" location="${wsdl.dir}/IUPredWS.wsdl" />\r
<property name="jronn.wsdl" location="${wsdl.dir}/JronnWS.wsdl" />\r
- \r
+\r
+ <property name="registry.wsdl" location="${wsdl.dir}/RegistryWS.wsdl" />\r
+ <property name="rnaalifold.wsdl" location="${wsdl.dir}/RNAalifold.wsdl" />\r
\r
<taskdef name="wsgen" onerror="report" classname="com.sun.tools.ws.ant.WsGen">\r
<classpath refid="project.classpath" />\r
\r
<target name="build-server">\r
<!-- TODO this runs file from Eclipse, but with Ant only this need to depends on clean and build! -->\r
- <property name="server.artifacts.dir" location="${basedir}/webservices/compbio/ws/server/jaxws/" />\r
+ <property name="server.artifacts.dir" location="${basedir}/webservices/compbio/ws/server/jaxws/" />\r
\r
- <mkdir dir="${server.artifacts.dir}" />\r
- <mkdir dir="${wsdl.dir}" />\r
- <delete quiet="false" verbose="true" failonerror="false">\r
- <fileset dir="${server.artifacts.dir}">\r
- <include name="*.java" />\r
- </fileset>\r
- <fileset dir="${wsdl.dir}">\r
- </fileset>\r
- </delete>\r
- <!-- destdir - Where to put generated classes -->\r
- <!-- sourcedestdir - Where to put generated source files -->\r
- <!-- resourcedestdir - Where to put generated source files -->\r
-\r
- <wsgen sei="compbio.ws.server.AAConWS" \r
- sourcedestdir="${basedir}/webservices" \r
- destdir="${classes}" \r
- resourcedestdir="${wsdl.dir}" \r
- keep="true" genwsdl="true" \r
- extension="false" \r
- xendorsed="true" \r
- verbose="true">\r
- <classpath refid="classes.path" />\r
- <classpath refid="project.classpath" />\r
- </wsgen>\r
+ <mkdir dir="${server.artifacts.dir}" />\r
+ <mkdir dir="${wsdl.dir}" />\r
+ <delete quiet="false" verbose="true" failonerror="false">\r
+ <fileset dir="${server.artifacts.dir}">\r
+ <include name="*.java" />\r
+ </fileset>\r
+ <fileset dir="${wsdl.dir}">\r
+ </fileset>\r
+ </delete>\r
\r
- <wsgen sei="compbio.ws.server.ClustalWS" \r
- sourcedestdir="${basedir}/webservices" \r
- destdir="${classes}" \r
- resourcedestdir="${wsdl.dir}" \r
- keep="true" genwsdl="true" \r
- extension="false" \r
- xendorsed="true"\r
- verbose="true">\r
- <classpath refid="classes.path" />\r
- <classpath refid="project.classpath" />\r
+ <!-- destdir - Where to put generated classes -->\r
+ <!-- sourcedestdir - Where to put generated source files -->\r
+ <!-- resourcedestdir - Where to put generated source files -->\r
+ <wsgen sei="compbio.ws.server.JpredWS"\r
+ sourcedestdir="${basedir}/webservices"\r
+ destdir="${classes}"\r
+ resourcedestdir="${wsdl.dir}"\r
+ keep="true"\r
+ genwsdl="true"\r
+ extension="false"\r
+ xendorsed="true"\r
+ verbose="true">\r
+ <classpath refid="classes.path" />\r
+ <classpath refid="project.classpath" />\r
</wsgen>\r
- <wsgen sei="compbio.ws.server.MuscleWS" \r
- sourcedestdir="${basedir}/webservices" \r
- destdir="${classes}" \r
- resourcedestdir="${wsdl.dir}" \r
- keep="true" genwsdl="true" \r
- extension="false"\r
- xendorsed="true"\r
- verbose="true">\r
- <classpath refid="classes.path" />\r
- <classpath refid="project.classpath" />\r
- </wsgen>\r
- <wsgen sei="compbio.ws.server.MafftWS" \r
- sourcedestdir="${basedir}/webservices" \r
- destdir="${classes}" \r
- resourcedestdir="${wsdl.dir}" \r
- keep="true" genwsdl="true" \r
- extension="false"\r
- xendorsed="true"\r
- verbose="true">\r
- <classpath refid="classes.path" />\r
- <classpath refid="project.classpath" />\r
- </wsgen>\r
- <wsgen sei="compbio.ws.server.TcoffeeWS" \r
- sourcedestdir="${basedir}/webservices" \r
- destdir="${classes}" \r
- resourcedestdir="${wsdl.dir}" \r
- keep="true" genwsdl="true" \r
- extension="false" \r
- xendorsed="true" \r
- verbose="true">\r
- <classpath refid="classes.path" />\r
- <classpath refid="project.classpath" />\r
+ <wsgen sei="compbio.ws.server.AAConWS"\r
+ sourcedestdir="${basedir}/webservices"\r
+ destdir="${classes}"\r
+ resourcedestdir="${wsdl.dir}"\r
+ keep="true"\r
+ genwsdl="true"\r
+ extension="false"\r
+ xendorsed="true"\r
+ verbose="true">\r
+ <classpath refid="classes.path" />\r
+ <classpath refid="project.classpath" />\r
</wsgen>\r
- \r
- <wsgen sei="compbio.ws.server.DisemblWS" \r
- sourcedestdir="${basedir}/webservices" \r
- destdir="${classes}" \r
- resourcedestdir="${wsdl.dir}" \r
- keep="true" genwsdl="true" \r
- extension="false" \r
- xendorsed="true" \r
- verbose="true">\r
- <classpath refid="classes.path" />\r
- <classpath refid="project.classpath" />\r
+ <wsgen sei="compbio.ws.server.MSAprobsWS"\r
+ sourcedestdir="${basedir}/webservices"\r
+ destdir="${classes}"\r
+ resourcedestdir="${wsdl.dir}"\r
+ keep="true"\r
+ genwsdl="true"\r
+ extension="false"\r
+ xendorsed="true"\r
+ verbose="true">\r
+ <classpath refid="classes.path" />\r
+ <classpath refid="project.classpath" />\r
+ </wsgen>\r
+ <wsgen sei="compbio.ws.server.GLprobsWS"\r
+ sourcedestdir="${basedir}/webservices"\r
+ destdir="${classes}"\r
+ resourcedestdir="${wsdl.dir}"\r
+ keep="true"\r
+ genwsdl="true"\r
+ extension="false"\r
+ xendorsed="true"\r
+ verbose="true">\r
+ <classpath refid="classes.path" />\r
+ <classpath refid="project.classpath" />\r
+ </wsgen>\r
+ <wsgen sei="compbio.ws.server.ClustalWS"\r
+ sourcedestdir="${basedir}/webservices"\r
+ destdir="${classes}"\r
+ resourcedestdir="${wsdl.dir}"\r
+ keep="true"\r
+ genwsdl="true"\r
+ extension="false"\r
+ xendorsed="true"\r
+ verbose="true">\r
+ <classpath refid="classes.path" />\r
+ <classpath refid="project.classpath" />\r
+ </wsgen>\r
+ <wsgen sei="compbio.ws.server.MuscleWS"\r
+ sourcedestdir="${basedir}/webservices"\r
+ destdir="${classes}"\r
+ resourcedestdir="${wsdl.dir}"\r
+ keep="true"\r
+ genwsdl="true"\r
+ extension="false"\r
+ xendorsed="true"\r
+ verbose="true">\r
+ <classpath refid="classes.path" />\r
+ <classpath refid="project.classpath" />\r
+ </wsgen>\r
+ <wsgen sei="compbio.ws.server.MafftWS"\r
+ sourcedestdir="${basedir}/webservices"\r
+ destdir="${classes}"\r
+ resourcedestdir="${wsdl.dir}"\r
+ keep="true"\r
+ genwsdl="true"\r
+ extension="false"\r
+ xendorsed="true"\r
+ verbose="true">\r
+ <classpath refid="classes.path" />\r
+ <classpath refid="project.classpath" />\r
+ </wsgen>\r
+ <wsgen sei="compbio.ws.server.TcoffeeWS"\r
+ sourcedestdir="${basedir}/webservices"\r
+ destdir="${classes}"\r
+ resourcedestdir="${wsdl.dir}"\r
+ keep="true"\r
+ genwsdl="true"\r
+ extension="false"\r
+ xendorsed="true"\r
+ verbose="true">\r
+ <classpath refid="classes.path" />\r
+ <classpath refid="project.classpath" />\r
+ </wsgen>\r
+ <wsgen sei="compbio.ws.server.DisemblWS"\r
+ sourcedestdir="${basedir}/webservices"\r
+ destdir="${classes}"\r
+ resourcedestdir="${wsdl.dir}"\r
+ keep="true"\r
+ genwsdl="true"\r
+ extension="false"\r
+ xendorsed="true"\r
+ verbose="true">\r
+ <classpath refid="classes.path" />\r
+ <classpath refid="project.classpath" />\r
+ </wsgen>\r
+ <wsgen sei="compbio.ws.server.GlobPlotWS"\r
+ sourcedestdir="${basedir}/webservices"\r
+ destdir="${classes}"\r
+ resourcedestdir="${wsdl.dir}"\r
+ keep="true"\r
+ genwsdl="true"\r
+ extension="false"\r
+ xendorsed="true"\r
+ verbose="true">\r
+ <classpath refid="classes.path" />\r
+ <classpath refid="project.classpath" />\r
</wsgen>\r
- <wsgen sei="compbio.ws.server.GlobPlotWS" \r
- sourcedestdir="${basedir}/webservices" \r
- destdir="${classes}" \r
- resourcedestdir="${wsdl.dir}" \r
- keep="true" genwsdl="true" \r
- extension="false" \r
- xendorsed="true" \r
- verbose="true">\r
- <classpath refid="classes.path" />\r
- <classpath refid="project.classpath" />\r
+ <wsgen sei="compbio.ws.server.JronnWS"\r
+ sourcedestdir="${basedir}/webservices"\r
+ destdir="${classes}"\r
+ resourcedestdir="${wsdl.dir}"\r
+ keep="true"\r
+ genwsdl="true"\r
+ extension="false"\r
+ xendorsed="true"\r
+ verbose="true">\r
+ <classpath refid="classes.path" />\r
+ <classpath refid="project.classpath" />\r
</wsgen>\r
- <wsgen sei="compbio.ws.server.JronnWS" \r
- sourcedestdir="${basedir}/webservices" \r
- destdir="${classes}" \r
- resourcedestdir="${wsdl.dir}" \r
- keep="true" genwsdl="true" \r
- extension="false" \r
- xendorsed="true" \r
- verbose="true">\r
- <classpath refid="classes.path" />\r
- <classpath refid="project.classpath" />\r
+ <wsgen sei="compbio.ws.server.IUPredWS"\r
+ sourcedestdir="${basedir}/webservices"\r
+ destdir="${classes}"\r
+ resourcedestdir="${wsdl.dir}"\r
+ keep="true"\r
+ genwsdl="true"\r
+ extension="false"\r
+ xendorsed="true"\r
+ verbose="true">\r
+ <classpath refid="classes.path" />\r
+ <classpath refid="project.classpath" />\r
+ </wsgen>\r
+ <wsgen sei="compbio.ws.server.RegistryWS"\r
+ sourcedestdir="${basedir}/webservices"\r
+ destdir="${classes}"\r
+ resourcedestdir="${wsdl.dir}"\r
+ keep="true"\r
+ genwsdl="true"\r
+ extension="false"\r
+ xendorsed="true"\r
+ verbose="true">\r
+ <classpath refid="classes.path" />\r
+ <classpath refid="project.classpath" />\r
+ </wsgen>\r
+ <wsgen sei="compbio.ws.server.RNAalifoldWS"\r
+ sourcedestdir="${basedir}/webservices"\r
+ destdir="${classes}"\r
+ resourcedestdir="${wsdl.dir}"\r
+ keep="true" genwsdl="true"\r
+ extension="false"\r
+ xendorsed="true"\r
+ verbose="true">\r
+ <classpath refid="classes.path" />\r
+ <classpath refid="project.classpath" />\r
</wsgen>\r
</target>\r
\r
-\r
<taskdef name="wsimport" classname="com.sun.tools.ws.ant.WsImport">\r
<classpath refid="project.classpath" />\r
</taskdef>\r
<include name="*.java" />\r
</fileset>\r
</delete>\r
- <wsimport wsdl="${clustal.wsdl}" \r
- sourcedestdir="${basedir}/webservices/" \r
- keep="true" extension="false" \r
- verbose="true" xnocompile="true" \r
- package="compbio.ws.client.stub" \r
+\r
+ <wsimport wsdl="${clustal.wsdl}"\r
+ sourcedestdir="${basedir}/webservices/"\r
+ keep="true" extension="false"\r
+ verbose="true" xnocompile="true" xendorsed="true"\r
+ package="compbio.ws.client.stub" target="2.1"\r
+ quiet="false">\r
+ </wsimport>\r
+\r
+ <wsimport wsdl="${muscle.wsdl}"\r
+ sourcedestdir="${basedir}/webservices/"\r
+ keep="true" extension="false"\r
+ verbose="true" xnocompile="true" xendorsed="true"\r
+ package="compbio.ws.client.stub" target="2.1"\r
+ quiet="false">\r
+ </wsimport>\r
+\r
+ <wsimport wsdl="${mafft.wsdl}"\r
+ sourcedestdir="${basedir}/webservices/"\r
+ keep="true" extension="false"\r
+ verbose="true" xnocompile="true" xendorsed="true"\r
+ package="compbio.ws.client.stub" target="2.1"\r
quiet="false">\r
</wsimport>\r
- <wsimport wsdl="${muscle.wsdl}" \r
- sourcedestdir="${basedir}/webservices/" \r
- keep="true" extension="false" \r
- verbose="true" xnocompile="true" \r
- package="compbio.ws.client.stub" \r
+\r
+ <wsimport wsdl="${tcoffee.wsdl}"\r
+ sourcedestdir="${basedir}/webservices/"\r
+ keep="true" extension="false"\r
+ verbose="true" xnocompile="true" xendorsed="true"\r
+ package="compbio.ws.client.stub" target="2.1"\r
quiet="false">\r
</wsimport>\r
- <wsimport wsdl="${mafft.wsdl}" \r
- sourcedestdir="${basedir}/webservices/" \r
- keep="true" extension="false" \r
- verbose="true" xnocompile="true" \r
- package="compbio.ws.client.stub" \r
+\r
+ <wsimport wsdl="${iupred.wsdl}"\r
+ sourcedestdir="${basedir}/webservices/"\r
+ keep="true" extension="false"\r
+ verbose="true" xnocompile="true" xendorsed="true"\r
+ package="compbio.ws.client.stub" target="2.1"\r
quiet="false">\r
</wsimport>\r
- <wsimport wsdl="${tcoffee.wsdl}" \r
- sourcedestdir="${basedir}/webservices/" \r
- keep="true" extension="false" \r
- verbose="true" xnocompile="true" \r
- package="compbio.ws.client.stub" \r
+\r
+ <wsimport wsdl="${registry.wsdl}"\r
+ sourcedestdir="${basedir}/webservices/"\r
+ keep="true" extension="false"\r
+ verbose="true" xnocompile="true" xendorsed="true"\r
+ package="compbio.ws.client.stub" target="2.1"\r
quiet="false">\r
</wsimport>\r
- <!-- <xjcarg value="-cp" />\r
- <xjcarg pathref="project.classpath" />\r
- <xjcarg value="-Xcommons-lang" /> -->\r
- \r
+\r
+ <wsimport wsdl="${rnaalifold.wsdl}"\r
+ sourcedestdir="${basedir}/webservices/"\r
+ keep="true" extension="false"\r
+ verbose="true" xnocompile="true" xendorsed="true"\r
+ package="compbio.ws.client.stub" target="2.1"\r
+ quiet="false">\r
+ </wsimport>\r
+\r
</target>\r
\r
- \r
<!-- \r
- \r
<target name="Build artifacts from schema" description="Test task to generate JaxB commons annotated data classes DOES NOT REALLY WORK">\r
<taskdef name="xjc" classname="com.sun.tools.xjc.XJCTask">\r
<classpath refid="project.classpath" />\r
<classpath refid="classes.path" />\r
<classpath>\r
<fileset dir="${basedir}/lib">\r
- //JAXB2 Basics library \r
+ //JAXB2 Basics library\r
<include name="jaxb2-basics-*.jar"/>\r
- // JAXB2 Basics library dependencies \r
+ // JAXB2 Basics library dependencies\r
<include name="jaxb2-basics-runtime-*.jar"/>\r
<include name="jaxb2-basics-tools-*.jar"/>\r
<include name="commons-beanutils-*.jar"/>\r
-XhashCode\r
-Xcopyable\r
-Xmergeable\r
- \r
- \r
- \r
- \r
+\r
<target name="build-Clustal-client-from-live-server">\r
\r
- <wsimport wsdl="http://localhost:7979/ClustalWS?wsdl" \r
- sourcedestdir="${basedir}/webservices/" \r
- keep="true" \r
- extension="false" \r
- verbose="true" \r
- xnocompile="true" \r
- package="compbio.ws.client.stub" \r
+ <wsimport wsdl="http://localhost:7979/ClustalWS?wsdl"\r
+ sourcedestdir="${basedir}/webservices/"\r
+ keep="true"\r
+ extension="false"\r
+ verbose="true"\r
+ xnocompile="true"\r
+ package="compbio.ws.client.stub"\r
quiet="false">\r
</wsimport>\r
</target>\r
\r
<target name="build-Muscle-client-from-live-server">\r
- <wsimport wsdl="http://localhost:7979/MuscleWS?wsdl" \r
- sourcedestdir="${basedir}/webservices/" \r
- keep="true" \r
- extension="false" \r
- verbose="true" \r
- xnocompile="true" \r
- package="compbio.ws.client.stub" \r
+ <wsimport wsdl="http://localhost:7979/MuscleWS?wsdl"\r
+ sourcedestdir="${basedir}/webservices/"\r
+ keep="true"\r
+ extension="false"\r
+ verbose="true"\r
+ xnocompile="true"\r
+ package="compbio.ws.client.stub"\r
quiet="false">\r
</wsimport>\r
</target>\r
git://source.jalview.org / jabaws.git / blobdiff