2 * AccessionMapperBindingStub.java
\r
4 * This file was auto-generated from WSDL
\r
5 * by the Apache Axis 1.2RC2 Nov 16, 2004 (12:19:44 EST) WSDL2Java emitter.
\r
8 package uk.ac.ebi.www.picr.AccessionMappingService;
\r
10 public class AccessionMapperBindingStub extends org.apache.axis.client.Stub implements uk.ac.ebi.www.picr.AccessionMappingService.AccessionMapperInterface {
\r
11 private java.util.Vector cachedSerClasses = new java.util.Vector();
\r
12 private java.util.Vector cachedSerQNames = new java.util.Vector();
\r
13 private java.util.Vector cachedSerFactories = new java.util.Vector();
\r
14 private java.util.Vector cachedDeserFactories = new java.util.Vector();
\r
16 static org.apache.axis.description.OperationDesc [] _operations;
\r
19 _operations = new org.apache.axis.description.OperationDesc[3];
\r
20 _initOperationDesc1();
\r
23 private static void _initOperationDesc1(){
\r
24 org.apache.axis.description.OperationDesc oper;
\r
25 oper = new org.apache.axis.description.OperationDesc();
\r
26 oper.setName("getUPIForSequence");
\r
27 oper.addParameter(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "sequence"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String.class, org.apache.axis.description.ParameterDesc.IN, false, false);
\r
28 oper.addParameter(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "searchDatabases"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String[].class, org.apache.axis.description.ParameterDesc.IN, false, false);
\r
29 oper.addParameter(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "taxonId"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String.class, org.apache.axis.description.ParameterDesc.IN, false, false);
\r
30 oper.addParameter(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "onlyActive"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "boolean"), boolean.class, org.apache.axis.description.ParameterDesc.IN, false, false);
\r
31 oper.setReturnType(new javax.xml.namespace.QName("http://model.picr.ebi.ac.uk", "UPEntry"));
\r
32 oper.setReturnClass(uk.ac.ebi.picr.model.UPEntry.class);
\r
33 oper.setReturnQName(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "getUPIForSequenceReturn"));
\r
34 oper.setStyle(org.apache.axis.constants.Style.WRAPPED);
\r
35 oper.setUse(org.apache.axis.constants.Use.LITERAL);
\r
36 _operations[0] = oper;
\r
38 oper = new org.apache.axis.description.OperationDesc();
\r
39 oper.setName("getUPIForAccession");
\r
40 oper.addParameter(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "accession"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String.class, org.apache.axis.description.ParameterDesc.IN, false, false);
\r
41 oper.addParameter(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "ac_version"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String.class, org.apache.axis.description.ParameterDesc.IN, false, false);
\r
42 oper.addParameter(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "searchDatabases"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String[].class, org.apache.axis.description.ParameterDesc.IN, false, false);
\r
43 oper.addParameter(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "taxonId"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String.class, org.apache.axis.description.ParameterDesc.IN, false, false);
\r
44 oper.addParameter(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "onlyActive"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "boolean"), boolean.class, org.apache.axis.description.ParameterDesc.IN, false, false);
\r
45 oper.setReturnType(new javax.xml.namespace.QName("http://model.picr.ebi.ac.uk", "UPEntry"));
\r
46 oper.setReturnClass(uk.ac.ebi.picr.model.UPEntry[].class);
\r
47 oper.setReturnQName(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "getUPIForAccessionReturn"));
\r
48 oper.setStyle(org.apache.axis.constants.Style.WRAPPED);
\r
49 oper.setUse(org.apache.axis.constants.Use.LITERAL);
\r
50 _operations[1] = oper;
\r
52 oper = new org.apache.axis.description.OperationDesc();
\r
53 oper.setName("getMappedDatabaseNames");
\r
54 oper.setReturnType(new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"));
\r
55 oper.setReturnClass(java.lang.String[].class);
\r
56 oper.setReturnQName(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "mappedDatabases"));
\r
57 oper.setStyle(org.apache.axis.constants.Style.WRAPPED);
\r
58 oper.setUse(org.apache.axis.constants.Use.LITERAL);
\r
59 _operations[2] = oper;
\r
63 public AccessionMapperBindingStub() throws org.apache.axis.AxisFault {
\r
67 public AccessionMapperBindingStub(java.net.URL endpointURL, javax.xml.rpc.Service service) throws org.apache.axis.AxisFault {
\r
69 super.cachedEndpoint = endpointURL;
\r
72 public AccessionMapperBindingStub(javax.xml.rpc.Service service) throws org.apache.axis.AxisFault {
\r
73 if (service == null) {
\r
74 super.service = new org.apache.axis.client.Service();
\r
76 super.service = service;
\r
78 java.lang.Class cls;
\r
79 javax.xml.namespace.QName qName;
\r
80 java.lang.Class beansf = org.apache.axis.encoding.ser.BeanSerializerFactory.class;
\r
81 java.lang.Class beandf = org.apache.axis.encoding.ser.BeanDeserializerFactory.class;
\r
82 java.lang.Class enumsf = org.apache.axis.encoding.ser.EnumSerializerFactory.class;
\r
83 java.lang.Class enumdf = org.apache.axis.encoding.ser.EnumDeserializerFactory.class;
\r
84 java.lang.Class arraysf = org.apache.axis.encoding.ser.ArraySerializerFactory.class;
\r
85 java.lang.Class arraydf = org.apache.axis.encoding.ser.ArrayDeserializerFactory.class;
\r
86 java.lang.Class simplesf = org.apache.axis.encoding.ser.SimpleSerializerFactory.class;
\r
87 java.lang.Class simpledf = org.apache.axis.encoding.ser.SimpleDeserializerFactory.class;
\r
88 java.lang.Class simplelistsf = org.apache.axis.encoding.ser.SimpleListSerializerFactory.class;
\r
89 java.lang.Class simplelistdf = org.apache.axis.encoding.ser.SimpleListDeserializerFactory.class;
\r
90 qName = new javax.xml.namespace.QName("http://model.picr.ebi.ac.uk", "UPEntry");
\r
91 cachedSerQNames.add(qName);
\r
92 cls = uk.ac.ebi.picr.model.UPEntry.class;
\r
93 cachedSerClasses.add(cls);
\r
94 cachedSerFactories.add(beansf);
\r
95 cachedDeserFactories.add(beandf);
\r
97 qName = new javax.xml.namespace.QName("http://model.picr.ebi.ac.uk", "CrossReference");
\r
98 cachedSerQNames.add(qName);
\r
99 cls = uk.ac.ebi.picr.model.CrossReference.class;
\r
100 cachedSerClasses.add(cls);
\r
101 cachedSerFactories.add(beansf);
\r
102 cachedDeserFactories.add(beandf);
\r
106 protected org.apache.axis.client.Call createCall() throws java.rmi.RemoteException {
\r
108 org.apache.axis.client.Call _call =
\r
109 (org.apache.axis.client.Call) super.service.createCall();
\r
110 if (super.maintainSessionSet) {
\r
111 _call.setMaintainSession(super.maintainSession);
\r
113 if (super.cachedUsername != null) {
\r
114 _call.setUsername(super.cachedUsername);
\r
116 if (super.cachedPassword != null) {
\r
117 _call.setPassword(super.cachedPassword);
\r
119 if (super.cachedEndpoint != null) {
\r
120 _call.setTargetEndpointAddress(super.cachedEndpoint);
\r
122 if (super.cachedTimeout != null) {
\r
123 _call.setTimeout(super.cachedTimeout);
\r
125 if (super.cachedPortName != null) {
\r
126 _call.setPortName(super.cachedPortName);
\r
128 java.util.Enumeration keys = super.cachedProperties.keys();
\r
129 while (keys.hasMoreElements()) {
\r
130 java.lang.String key = (java.lang.String) keys.nextElement();
\r
131 _call.setProperty(key, super.cachedProperties.get(key));
\r
133 // All the type mapping information is registered
\r
134 // when the first call is made.
\r
135 // The type mapping information is actually registered in
\r
136 // the TypeMappingRegistry of the service, which
\r
137 // is the reason why registration is only needed for the first call.
\r
138 synchronized (this) {
\r
140 // must set encoding style before registering serializers
\r
141 _call.setEncodingStyle(null);
\r
142 for (int i = 0; i < cachedSerFactories.size(); ++i) {
\r
143 java.lang.Class cls = (java.lang.Class) cachedSerClasses.get(i);
\r
144 javax.xml.namespace.QName qName =
\r
145 (javax.xml.namespace.QName) cachedSerQNames.get(i);
\r
146 java.lang.Class sf = (java.lang.Class)
\r
147 cachedSerFactories.get(i);
\r
148 java.lang.Class df = (java.lang.Class)
\r
149 cachedDeserFactories.get(i);
\r
150 _call.registerTypeMapping(cls, qName, sf, df, false);
\r
156 catch (java.lang.Throwable _t) {
\r
157 throw new org.apache.axis.AxisFault("Failure trying to get the Call object", _t);
\r
161 public uk.ac.ebi.picr.model.UPEntry getUPIForSequence(java.lang.String sequence, java.lang.String[] searchDatabases, java.lang.String taxonId, boolean onlyActive) throws java.rmi.RemoteException {
\r
162 if (super.cachedEndpoint == null) {
\r
163 throw new org.apache.axis.NoEndPointException();
\r
165 org.apache.axis.client.Call _call = createCall();
\r
166 _call.setOperation(_operations[0]);
\r
167 _call.setUseSOAPAction(true);
\r
168 _call.setSOAPActionURI("getUPIForSequence");
\r
169 _call.setEncodingStyle(null);
\r
170 _call.setProperty(org.apache.axis.client.Call.SEND_TYPE_ATTR, Boolean.FALSE);
\r
171 _call.setProperty(org.apache.axis.AxisEngine.PROP_DOMULTIREFS, Boolean.FALSE);
\r
172 _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
\r
173 _call.setOperationName(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "getUPIForSequence"));
\r
175 setRequestHeaders(_call);
\r
176 setAttachments(_call);
\r
177 java.lang.Object _resp = _call.invoke(new java.lang.Object[] {sequence, searchDatabases, taxonId, new java.lang.Boolean(onlyActive)});
\r
179 if (_resp instanceof java.rmi.RemoteException) {
\r
180 throw (java.rmi.RemoteException)_resp;
\r
183 extractAttachments(_call);
\r
185 return (uk.ac.ebi.picr.model.UPEntry) _resp;
\r
186 } catch (java.lang.Exception _exception) {
\r
187 return (uk.ac.ebi.picr.model.UPEntry) org.apache.axis.utils.JavaUtils.convert(_resp, uk.ac.ebi.picr.model.UPEntry.class);
\r
192 public uk.ac.ebi.picr.model.UPEntry[] getUPIForAccession(java.lang.String accession, java.lang.String ac_version, java.lang.String[] searchDatabases, java.lang.String taxonId, boolean onlyActive) throws java.rmi.RemoteException {
\r
193 if (super.cachedEndpoint == null) {
\r
194 throw new org.apache.axis.NoEndPointException();
\r
196 org.apache.axis.client.Call _call = createCall();
\r
197 _call.setOperation(_operations[1]);
\r
198 _call.setUseSOAPAction(true);
\r
199 _call.setSOAPActionURI("getUPIForAccession");
\r
200 _call.setEncodingStyle(null);
\r
201 _call.setProperty(org.apache.axis.client.Call.SEND_TYPE_ATTR, Boolean.FALSE);
\r
202 _call.setProperty(org.apache.axis.AxisEngine.PROP_DOMULTIREFS, Boolean.FALSE);
\r
203 _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
\r
204 _call.setOperationName(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "getUPIForAccession"));
\r
206 setRequestHeaders(_call);
\r
207 setAttachments(_call);
\r
208 java.lang.Object _resp = _call.invoke(new java.lang.Object[] {accession, ac_version, searchDatabases, taxonId, new java.lang.Boolean(onlyActive)});
\r
210 if (_resp instanceof java.rmi.RemoteException) {
\r
211 throw (java.rmi.RemoteException)_resp;
\r
214 extractAttachments(_call);
\r
216 return (uk.ac.ebi.picr.model.UPEntry[]) _resp;
\r
217 } catch (java.lang.Exception _exception) {
\r
218 return (uk.ac.ebi.picr.model.UPEntry[]) org.apache.axis.utils.JavaUtils.convert(_resp, uk.ac.ebi.picr.model.UPEntry[].class);
\r
223 public java.lang.String[] getMappedDatabaseNames() throws java.rmi.RemoteException {
\r
224 if (super.cachedEndpoint == null) {
\r
225 throw new org.apache.axis.NoEndPointException();
\r
227 org.apache.axis.client.Call _call = createCall();
\r
228 _call.setOperation(_operations[2]);
\r
229 _call.setUseSOAPAction(true);
\r
230 _call.setSOAPActionURI("getMappedDatabaseNames");
\r
231 _call.setEncodingStyle(null);
\r
232 _call.setProperty(org.apache.axis.client.Call.SEND_TYPE_ATTR, Boolean.FALSE);
\r
233 _call.setProperty(org.apache.axis.AxisEngine.PROP_DOMULTIREFS, Boolean.FALSE);
\r
234 _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
\r
235 _call.setOperationName(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "getMappedDatabaseNames"));
\r
237 setRequestHeaders(_call);
\r
238 setAttachments(_call);
\r
239 java.lang.Object _resp = _call.invoke(new java.lang.Object[] {});
\r
241 if (_resp instanceof java.rmi.RemoteException) {
\r
242 throw (java.rmi.RemoteException)_resp;
\r
245 extractAttachments(_call);
\r
247 return (java.lang.String[]) _resp;
\r
248 } catch (java.lang.Exception _exception) {
\r
249 return (java.lang.String[]) org.apache.axis.utils.JavaUtils.convert(_resp, java.lang.String[].class);
\r